RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 AFF2P51816 1311 aa9.4□□□□□ -0.9
LINC00649-213ENST00000608431 HNRNPMP52272 730 aaKnown RBP eCLIP9.4□□□□□ -0.9
LINC00649-213ENST00000608431 PROSER2Q86WR7 435 aaPredicted RBP9.4□□□□□ -0.9
LINC00649-213ENST00000608431 PROM2Q8N271 834 aa9.4□□□□□ -0.9
LINC00649-213ENST00000608431 NWD1Q149M9 1564 aa9.4□□□□□ -0.9
LINC00649-213ENST00000608431 NKTRP30414 1462 aaKnown RBP9.4□□□□□ -0.91
LINC00649-213ENST00000608431 EID1Q9Y6B2 187 aa9.39□□□□□ -0.91
LINC00649-213ENST00000608431 ARHGAP23Q9P227 1491 aa9.39□□□□□ -0.91
LINC00649-213ENST00000608431 DHX29Q7Z478 1369 aaKnown RBP9.38□□□□□ -0.91
LINC00649-213ENST00000608431 KCNA6P17658 529 aa9.38□□□□□ -0.91
LINC00649-213ENST00000608431 CACNB1Q02641 598 aaPredicted RBP9.38□□□□□ -0.91
LINC00649-213ENST00000608431 TXNDC2Q86VQ3 553 aa9.38□□□□□ -0.91
LINC00649-213ENST00000608431 QTRT2Q9H974 415 aaKnown RBP9.38□□□□□ -0.91
LINC00649-213ENST00000608431 ZBTB12Q9Y330 459 aaPredicted RBP9.38□□□□□ -0.91
LINC00649-213ENST00000608431 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
LINC00649-213ENST00000608431 NHSL1Q5SYE7 1610 aa9.37□□□□□ -0.91
LINC00649-213ENST00000608431 RTEL1-TNFRSF6BF6WH68 1400 aa9.37□□□□□ -0.91
LINC00649-213ENST00000608431 CHD2O14647 1828 aaKnown RBP9.36□□□□□ -0.91
LINC00649-213ENST00000608431 KIF3BO15066 747 aa9.36□□□□□ -0.91
LINC00649-213ENST00000608431 CEP350Q5VT06 3117 aa9.36□□□□□ -0.91
LINC00649-213ENST00000608431 DIP2AQ14689 1571 aa9.36□□□□□ -0.91
LINC00649-213ENST00000608431 LTKP29376 864 aa9.35□□□□□ -0.91
LINC00649-213ENST00000608431 GPATCH8Q9UKJ3 1502 aaKnown RBP9.35□□□□□ -0.91
LINC00649-213ENST00000608431 ERVK-7P63135 1459 aa9.34□□□□□ -0.91
LINC00649-213ENST00000608431 NCOA2Q15596 1464 aa9.34□□□□□ -0.91
LINC00649-213ENST00000608431 YY1P25490 414 aa9.34□□□□□ -0.91
LINC00649-213ENST00000608431 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.33□□□□□ -0.92
LINC00649-213ENST00000608431 HRCP23327 699 aa9.32□□□□□ -0.92
LINC00649-213ENST00000608431 TET3O43151 1660 aa9.32□□□□□ -0.92
LINC00649-213ENST00000608431 CEP152O94986 1710 aa9.31□□□□□ -0.92
LINC00649-213ENST00000608431 C8orf37Q96NL8 207 aa9.31□□□□□ -0.92
LINC00649-213ENST00000608431 RTN4Q9NQC3 1192 aaKnown RBP9.31□□□□□ -0.92
LINC00649-213ENST00000608431 CFDP1Q9UEE9 299 aaPredicted RBP9.31□□□□□ -0.92
LINC00649-213ENST00000608431 CAMSAP2Q08AD1 1489 aa9.31□□□□□ -0.92
LINC00649-213ENST00000608431 PIK3C2BO00750 1634 aa9.31□□□□□ -0.92
LINC00649-213ENST00000608431 NCOA3Q9Y6Q9 1424 aa9.31□□□□□ -0.92
LINC00649-213ENST00000608431 EEA1Q15075 1411 aa9.3□□□□□ -0.92
LINC00649-213ENST00000608431 MROH1Q8NDA8 1641 aa9.29□□□□□ -0.92
LINC00649-213ENST00000608431 BLMP54132 1417 aaPredicted RBP9.29□□□□□ -0.92
LINC00649-213ENST00000608431 ARHGAP35Q9NRY4 1499 aa9.28□□□□□ -0.92
LINC00649-213ENST00000608431 TMEM2Q9UHN6 1383 aa9.28□□□□□ -0.92
LINC00649-213ENST00000608431 CADPS2Q86UW7 1296 aa9.28□□□□□ -0.92
LINC00649-213ENST00000608431 TRPC5Q9UL62 973 aaPredicted RBP9.28□□□□□ -0.92
LINC00649-213ENST00000608431 SETD5Q9C0A6 1442 aa9.28□□□□□ -0.92
LINC00649-213ENST00000608431 EIF2AK4Q9P2K8 1649 aaKnown RBP9.27□□□□□ -0.92
LINC00649-213ENST00000608431 SLC26A8Q96RN1 970 aa9.27□□□□□ -0.93
LINC00649-213ENST00000608431 SPHKAPQ2M3C7 1700 aa9.27□□□□□ -0.93
LINC00649-213ENST00000608431 EFCAB6Q5THR3 1501 aa9.26□□□□□ -0.93
LINC00649-213ENST00000608431 CCNB3Q8WWL7 1395 aa9.26□□□□□ -0.93
LINC00649-213ENST00000608431 ATF3P18847 181 aa9.26□□□□□ -0.93
LINC00649-213ENST00000608431 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
LINC00649-213ENST00000608431 C14orf37Q86TY3 774 aa9.26□□□□□ -0.93
LINC00649-213ENST00000608431 LRRC59Q96AG4 307 aaKnown RBP9.26□□□□□ -0.93
LINC00649-213ENST00000608431 MBD5Q9P267 1494 aa9.26□□□□□ -0.93
LINC00649-213ENST00000608431 UNC13BO14795 1591 aa9.25□□□□□ -0.93
LINC00649-213ENST00000608431 CASKIN1Q8WXD9 1431 aa9.25□□□□□ -0.93
LINC00649-213ENST00000608431 STAG3Q9UJ98 1225 aa9.25□□□□□ -0.93
LINC00649-213ENST00000608431 USP21Q9UK80 565 aa9.25□□□□□ -0.93
LINC00649-213ENST00000608431 BRWD3Q6RI45 1802 aa9.25□□□□□ -0.93
LINC00649-213ENST00000608431 MARF1Q9Y4F3 1742 aaKnown RBP9.25□□□□□ -0.93
LINC00649-213ENST00000608431 MAST1Q9Y2H9 1570 aa9.24□□□□□ -0.93
LINC00649-213ENST00000608431 SENP3-EIF4A1A0A087X0R7 540 aa9.24□□□□□ -0.93
LINC00649-213ENST00000608431 C19orf44Q9H6X5 657 aa9.24□□□□□ -0.93
LINC00649-213ENST00000608431 UTRNP46939 3433 aa9.23□□□□□ -0.93
LINC00649-213ENST00000608431 CCDC141Q6ZP82 1450 aa9.23□□□□□ -0.93
LINC00649-213ENST00000608431 ASXL1Q8IXJ9 1541 aa9.23□□□□□ -0.93
LINC00649-213ENST00000608431 AMER1Q5JTC6 1135 aaPredicted RBP9.23□□□□□ -0.93
LINC00649-213ENST00000608431 BRINP3Q76B58 766 aa9.23□□□□□ -0.93
LINC00649-213ENST00000608431 ATRNO75882 1429 aa9.22□□□□□ -0.93
LINC00649-213ENST00000608431 BCL9LQ86UU0 1499 aa9.22□□□□□ -0.93
LINC00649-213ENST00000608431 FBXO3Q9UK99 471 aa9.22□□□□□ -0.93
LINC00649-213ENST00000608431 CHD4Q14839 1912 aa9.22□□□□□ -0.93
LINC00649-213ENST00000608431 FYCO1Q9BQS8 1478 aa9.21□□□□□ -0.93
LINC00649-213ENST00000608431 RSPH4AQ5TD94 716 aa9.21□□□□□ -0.94
LINC00649-213ENST00000608431 BCANQ96GW7 911 aa9.21□□□□□ -0.94
LINC00649-213ENST00000608431 SSUH2Q9Y2M2 353 aa9.21□□□□□ -0.94
LINC00649-213ENST00000608431 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.21□□□□□ -0.94
LINC00649-213ENST00000608431 PNPLA6Q8IY17 1366 aa9.21□□□□□ -0.94
LINC00649-213ENST00000608431 ARHGAP31Q2M1Z3 1444 aa9.21□□□□□ -0.94
LINC00649-213ENST00000608431 PSDA5PKW4 1024 aaPredicted RBP9.2□□□□□ -0.94
LINC00649-213ENST00000608431 SPDYE2BA6NHP3 402 aa9.2□□□□□ -0.94
LINC00649-213ENST00000608431 ADAMTS2O95450 1211 aa9.2□□□□□ -0.94
LINC00649-213ENST00000608431 SPDYE6P0CI01 402 aa9.2□□□□□ -0.94
LINC00649-213ENST00000608431 SPDYE2Q495Y8 402 aa9.2□□□□□ -0.94
LINC00649-213ENST00000608431 DEFB132Q7Z7B7 95 aa9.2□□□□□ -0.94
LINC00649-213ENST00000608431 ZNF692Q9BU19 519 aaPredicted RBP9.2□□□□□ -0.94
LINC00649-213ENST00000608431 DCCP43146 1447 aa9.2□□□□□ -0.94
LINC00649-213ENST00000608431 PTCH1Q13635 1447 aa9.2□□□□□ -0.94
LINC00649-213ENST00000608431 MYO5BQ9ULV0 1848 aa9.19□□□□□ -0.94
LINC00649-213ENST00000608431 FNBP4Q8N3X1 1017 aaPredicted RBP9.19□□□□□ -0.94
LINC00649-213ENST00000608431 ZNF644Q9H582 1327 aaPredicted RBP9.19□□□□□ -0.94
LINC00649-213ENST00000608431 ARHGEF5Q12774 1597 aa9.17□□□□□ -0.94
LINC00649-213ENST00000608431 ADGRB3O60242 1522 aa9.17□□□□□ -0.94
LINC00649-213ENST00000608431 UBTFP17480 764 aaKnown RBP9.17□□□□□ -0.94
LINC00649-213ENST00000608431 RGPD1P0DJD0 1748 aa9.17□□□□□ -0.94
LINC00649-213ENST00000608431 LAMC1P11047 1609 aa9.16□□□□□ -0.94
LINC00649-213ENST00000608431 TSPY4P0CV99 314 aa9.16□□□□□ -0.94
LINC00649-213ENST00000608431 TSPY10P0CW01 314 aa9.16□□□□□ -0.94
LINC00649-213ENST00000608431 BAG6P46379 1132 aa9.16□□□□□ -0.94
LINC00649-213ENST00000608431 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms