RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 SYNJ2O15056 1496 aa13.13□□□□□ -0.31
CTCFL-216ENST00000608263 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
CTCFL-216ENST00000608263 PMFBP1Q8TBY8 1022 aa13.13□□□□□ -0.31
CTCFL-216ENST00000608263 CUL7Q14999 1698 aa13.13□□□□□ -0.31
CTCFL-216ENST00000608263 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
CTCFL-216ENST00000608263 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
CTCFL-216ENST00000608263 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
CTCFL-216ENST00000608263 DHX29Q7Z478 1369 aaKnown RBP13.11□□□□□ -0.31
CTCFL-216ENST00000608263 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
CTCFL-216ENST00000608263 ARHGAP5Q13017 1502 aa13.11□□□□□ -0.31
CTCFL-216ENST00000608263 AEBP2Q6ZN18 517 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-216ENST00000608263 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
CTCFL-216ENST00000608263 EIF3AQ14152 1382 aaKnown RBP13.1□□□□□ -0.31
CTCFL-216ENST00000608263 VGFO15240 615 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-216ENST00000608263 MTHFSP49914 203 aa13.1□□□□□ -0.31
CTCFL-216ENST00000608263 ZNF330Q9Y3S2 320 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-216ENST00000608263 DISP3Q9P2K9 1392 aa13.09□□□□□ -0.31
CTCFL-216ENST00000608263 ERBINQ96RT1 1412 aa13.08□□□□□ -0.32
CTCFL-216ENST00000608263 KIAA0586Q9BVV6 1533 aa13.08□□□□□ -0.32
CTCFL-216ENST00000608263 GOLGA6L22H0YM25 854 aa13.07□□□□□ -0.32
CTCFL-216ENST00000608263 GGNBP2Q9H3C7 697 aa13.07□□□□□ -0.32
CTCFL-216ENST00000608263 TSR2Q969E8 191 aaKnown RBP13.07□□□□□ -0.32
CTCFL-216ENST00000608263 MAGI3Q5TCQ9 1506 aa13.07□□□□□ -0.32
CTCFL-216ENST00000608263 L1TD1Q5T7N2 865 aaKnown RBP13.06□□□□□ -0.32
CTCFL-216ENST00000608263 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
CTCFL-216ENST00000608263 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
CTCFL-216ENST00000608263 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
CTCFL-216ENST00000608263 NUTM2GQ5VZR2 741 aa13.05□□□□□ -0.32
CTCFL-216ENST00000608263 KDM6BO15054 1643 aa13.05□□□□□ -0.32
CTCFL-216ENST00000608263 GOLGA6L3A6NEY3 463 aa13.05□□□□□ -0.32
CTCFL-216ENST00000608263 SLC26A8Q96RN1 970 aa13.05□□□□□ -0.32
CTCFL-216ENST00000608263 LNPKQ9C0E8 428 aa13.05□□□□□ -0.32
CTCFL-216ENST00000608263 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
CTCFL-216ENST00000608263 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
CTCFL-216ENST00000608263 NPHP1O15259 732 aa13.04□□□□□ -0.32
CTCFL-216ENST00000608263 GPATCH8Q9UKJ3 1502 aaKnown RBP13.04□□□□□ -0.32
CTCFL-216ENST00000608263 ANKRD45Q5TZF3 282 aa13.04□□□□□ -0.32
CTCFL-216ENST00000608263 RUNDC1Q96C34 613 aa13.04□□□□□ -0.32
CTCFL-216ENST00000608263 IPO8O15397 1037 aaKnown RBP13.04□□□□□ -0.32
CTCFL-216ENST00000608263 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
CTCFL-216ENST00000608263 CEBPAP49715 358 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-216ENST00000608263 GRIN2AQ12879 1464 aa13.03□□□□□ -0.32
CTCFL-216ENST00000608263 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
CTCFL-216ENST00000608263 NUP153P49790 1475 aaKnown RBP13.03□□□□□ -0.32
CTCFL-216ENST00000608263 FOXD4L5Q5VV16 416 aaPredicted RBP13.02□□□□□ -0.32
CTCFL-216ENST00000608263 FOXD4L4Q8WXT5 416 aaPredicted RBP13.02□□□□□ -0.32
CTCFL-216ENST00000608263 AMPHP49418 695 aa13.02□□□□□ -0.33
CTCFL-216ENST00000608263 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.33
CTCFL-216ENST00000608263 IGHDP01880 384 aa13.01□□□□□ -0.33
CTCFL-216ENST00000608263 RIPK4P57078 832 aa13.01□□□□□ -0.33
CTCFL-216ENST00000608263 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
CTCFL-216ENST00000608263 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
CTCFL-216ENST00000608263 PER1O15534 1290 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-216ENST00000608263 CTTNBP2Q8WZ74 1663 aa13.01□□□□□ -0.33
CTCFL-216ENST00000608263 NOL8Q76FK4 1167 aaKnown RBP13.01□□□□□ -0.33
CTCFL-216ENST00000608263 TEX14Q8IWB6 1497 aa13□□□□□ -0.33
CTCFL-216ENST00000608263 HMOX1P09601 288 aa13□□□□□ -0.33
CTCFL-216ENST00000608263 EXOSC9Q06265 439 aaKnown RBP13□□□□□ -0.33
CTCFL-216ENST00000608263 ARID3AQ99856 593 aa13□□□□□ -0.33
CTCFL-216ENST00000608263 PZPP20742 1482 aa13□□□□□ -0.33
CTCFL-216ENST00000608263 TCOF1Q13428 1488 aaKnown RBP13□□□□□ -0.33
CTCFL-216ENST00000608263 WWC1Q8IX03 1113 aa13□□□□□ -0.33
CTCFL-216ENST00000608263 PLCB2Q00722 1185 aa12.99□□□□□ -0.33
CTCFL-216ENST00000608263 TESK2Q96S53 571 aa12.99□□□□□ -0.33
CTCFL-216ENST00000608263 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-216ENST00000608263 MAGI1Q96QZ7 1491 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-216ENST00000608263 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
CTCFL-216ENST00000608263 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
CTCFL-216ENST00000608263 C22orf23Q9BZE7 217 aa12.98□□□□□ -0.33
CTCFL-216ENST00000608263 TNNQ9UQP3 1299 aa12.98□□□□□ -0.33
CTCFL-216ENST00000608263 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
CTCFL-216ENST00000608263 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
CTCFL-216ENST00000608263 PLEKHH2Q8IVE3 1493 aa12.98□□□□□ -0.33
CTCFL-216ENST00000608263 PTMAP06454 111 aaKnown RBP12.97□□□□□ -0.33
CTCFL-216ENST00000608263 SLC4A10Q6U841 1118 aa12.97□□□□□ -0.33
CTCFL-216ENST00000608263 TARBP1Q13395 1621 aaKnown RBP12.97□□□□□ -0.33
CTCFL-216ENST00000608263 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-216ENST00000608263 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-216ENST00000608263 PLEKHH1Q9ULM0 1364 aa12.96□□□□□ -0.33
CTCFL-216ENST00000608263 PDE3AQ14432 1141 aa12.96□□□□□ -0.33
CTCFL-216ENST00000608263 EVC2Q86UK5 1308 aa12.96□□□□□ -0.33
CTCFL-216ENST00000608263 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.33
CTCFL-216ENST00000608263 CD109Q6YHK3 1445 aa12.96□□□□□ -0.34
CTCFL-216ENST00000608263 ADGRF5Q8IZF2 1346 aa12.95□□□□□ -0.34
CTCFL-216ENST00000608263 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
CTCFL-216ENST00000608263 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
CTCFL-216ENST00000608263 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
CTCFL-216ENST00000608263 RNF123Q5XPI4 1314 aa12.95□□□□□ -0.34
CTCFL-216ENST00000608263 PARD3Q8TEW0 1356 aa12.95□□□□□ -0.34
CTCFL-216ENST00000608263 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
CTCFL-216ENST00000608263 PSME1Q06323 249 aa12.94□□□□□ -0.34
CTCFL-216ENST00000608263 DDX19BQ9UMR2 479 aa12.94□□□□□ -0.34
CTCFL-216ENST00000608263 RALGAPBQ86X10 1494 aa12.94□□□□□ -0.34
CTCFL-216ENST00000608263 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
CTCFL-216ENST00000608263 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
CTCFL-216ENST00000608263 SEC24BO95487 1268 aa12.93□□□□□ -0.34
CTCFL-216ENST00000608263 DNTTIP2Q5QJE6 756 aaKnown RBP12.93□□□□□ -0.34
CTCFL-216ENST00000608263 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
CTCFL-216ENST00000608263 C8orf34Q49A92 452 aa12.93□□□□□ -0.34
CTCFL-216ENST00000608263 CCDC141Q6ZP82 1450 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms