RNA–Protein interactions for RNA: ENST00000606296.1

SATB1-218, Transcript of SATB homeobox 1, humanhuman

Gene SATB1, Length 4,200 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-218ENST00000606296 RNF123Q5XPI4 1314 aa9.32□□□□□ -0.92
SATB1-218ENST00000606296 WASHC2CQ9Y4E1 1318 aa9.32□□□□□ -0.92
SATB1-218ENST00000606296 TESK2Q96S53 571 aa9.32□□□□□ -0.92
SATB1-218ENST00000606296 GRIN2AQ12879 1464 aa9.32□□□□□ -0.92
SATB1-218ENST00000606296 MAGI1Q96QZ7 1491 aaPredicted RBP9.32□□□□□ -0.92
SATB1-218ENST00000606296 IFT140Q96RY7 1462 aa9.32□□□□□ -0.92
SATB1-218ENST00000606296 WDR62O43379 1518 aa9.32□□□□□ -0.92
SATB1-218ENST00000606296 SAMD9Q5K651 1589 aa9.31□□□□□ -0.92
SATB1-218ENST00000606296 TSR2Q969E8 191 aaKnown RBP9.31□□□□□ -0.92
SATB1-218ENST00000606296 KDM5BQ9UGL1 1544 aa9.3□□□□□ -0.92
SATB1-218ENST00000606296 IGHDP01880 384 aa9.3□□□□□ -0.92
SATB1-218ENST00000606296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.3□□□□□ -0.92
SATB1-218ENST00000606296 SPINK5Q9NQ38 1064 aaPredicted RBP9.3□□□□□ -0.92
SATB1-218ENST00000606296 RALGAPBQ86X10 1494 aa9.3□□□□□ -0.92
SATB1-218ENST00000606296 PDZRN3Q9UPQ7 1066 aa9.3□□□□□ -0.92
SATB1-218ENST00000606296 PARD3Q8TEW0 1356 aa9.3□□□□□ -0.92
SATB1-218ENST00000606296 GGNBP2Q9H3C7 697 aa9.3□□□□□ -0.92
SATB1-218ENST00000606296 SYNJ2O15056 1496 aa9.3□□□□□ -0.92
SATB1-218ENST00000606296 LRPPRCP42704 1394 aaKnown RBP9.29□□□□□ -0.92
SATB1-218ENST00000606296 PLEKHH2Q8IVE3 1493 aa9.29□□□□□ -0.92
SATB1-218ENST00000606296 ZKSCAN2Q63HK3 967 aa9.29□□□□□ -0.92
SATB1-218ENST00000606296 CABP2Q9NPB3 220 aa9.29□□□□□ -0.92
SATB1-218ENST00000606296 PLEKHH1Q9ULM0 1364 aa9.29□□□□□ -0.92
SATB1-218ENST00000606296 L1TD1Q5T7N2 865 aaKnown RBP9.29□□□□□ -0.92
SATB1-218ENST00000606296 RUNDC1Q96C34 613 aa9.29□□□□□ -0.92
SATB1-218ENST00000606296 GOLGA6L3A6NEY3 463 aa9.29□□□□□ -0.92
SATB1-218ENST00000606296 MLECQ14165 292 aa9.28□□□□□ -0.92
SATB1-218ENST00000606296 LNPKQ9C0E8 428 aa9.28□□□□□ -0.92
SATB1-218ENST00000606296 MINK1Q8N4C8 1332 aaPredicted RBP9.28□□□□□ -0.92
SATB1-218ENST00000606296 WWC1Q8IX03 1113 aa9.28□□□□□ -0.92
SATB1-218ENST00000606296 TNNQ9UQP3 1299 aa9.28□□□□□ -0.92
SATB1-218ENST00000606296 DZIP1LQ8IYY4 767 aaKnown RBP9.28□□□□□ -0.92
SATB1-218ENST00000606296 RAPGEF6Q8TEU7 1601 aa9.27□□□□□ -0.93
SATB1-218ENST00000606296 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
SATB1-218ENST00000606296 ZBTB7CA1YPR0 619 aa9.27□□□□□ -0.93
SATB1-218ENST00000606296 GCC2Q8IWJ2 1684 aa9.27□□□□□ -0.93
SATB1-218ENST00000606296 CCDC141Q6ZP82 1450 aa9.27□□□□□ -0.93
SATB1-218ENST00000606296 DNMT1P26358 1616 aaKnown RBP9.27□□□□□ -0.93
SATB1-218ENST00000606296 GOLGA6L22H0YM25 854 aa9.26□□□□□ -0.93
SATB1-218ENST00000606296 C8orf34Q49A92 452 aa9.26□□□□□ -0.93
SATB1-218ENST00000606296 ANKRD45Q5TZF3 282 aa9.26□□□□□ -0.93
SATB1-218ENST00000606296 DMRT2Q9Y5R5 561 aa9.26□□□□□ -0.93
SATB1-218ENST00000606296 DISP1Q96F81 1524 aa9.26□□□□□ -0.93
SATB1-218ENST00000606296 ESF1Q9H501 851 aaKnown RBP9.26□□□□□ -0.93
SATB1-218ENST00000606296 PRAG1Q86YV5 1406 aa9.26□□□□□ -0.93
SATB1-218ENST00000606296 EXOSC9Q06265 439 aaKnown RBP9.26□□□□□ -0.93
SATB1-218ENST00000606296 ABCA5Q8WWZ7 1642 aa9.26□□□□□ -0.93
SATB1-218ENST00000606296 ATP10BO94823 1461 aa9.26□□□□□ -0.93
SATB1-218ENST00000606296 IPO8O15397 1037 aaKnown RBP9.26□□□□□ -0.93
SATB1-218ENST00000606296 SEC24BO95487 1268 aa9.26□□□□□ -0.93
SATB1-218ENST00000606296 RIPK4P57078 832 aa9.25□□□□□ -0.93
SATB1-218ENST00000606296 PDE3AQ14432 1141 aa9.25□□□□□ -0.93
SATB1-218ENST00000606296 C22orf23Q9BZE7 217 aa9.25□□□□□ -0.93
SATB1-218ENST00000606296 PNNQ9H307 717 aaKnown RBP9.25□□□□□ -0.93
SATB1-218ENST00000606296 ADGRF5Q8IZF2 1346 aa9.25□□□□□ -0.93
SATB1-218ENST00000606296 NUTM2FA1L443 756 aa9.25□□□□□ -0.93
SATB1-218ENST00000606296 HMOX1P09601 288 aa9.24□□□□□ -0.93
SATB1-218ENST00000606296 FOXD4L5Q5VV16 416 aaPredicted RBP9.24□□□□□ -0.93
SATB1-218ENST00000606296 FOXD4L4Q8WXT5 416 aaPredicted RBP9.24□□□□□ -0.93
SATB1-218ENST00000606296 C1orf115Q9H7X2 142 aa9.24□□□□□ -0.93
SATB1-218ENST00000606296 KIAA0556O60303 1618 aa9.24□□□□□ -0.93
SATB1-218ENST00000606296 KIF21AQ7Z4S6 1674 aa9.24□□□□□ -0.93
SATB1-218ENST00000606296 KIF14Q15058 1648 aa9.23□□□□□ -0.93
SATB1-218ENST00000606296 ADAMTS12P58397 1594 aa9.23□□□□□ -0.93
SATB1-218ENST00000606296 HDGFL2Q7Z4V5 671 aaPredicted RBP9.23□□□□□ -0.93
SATB1-218ENST00000606296 SCAPERQ9BY12 1400 aa9.23□□□□□ -0.93
SATB1-218ENST00000606296 BCORL1Q5H9F3 1711 aa9.23□□□□□ -0.93
SATB1-218ENST00000606296 RARSP54136 660 aaKnown RBP9.23□□□□□ -0.93
SATB1-218ENST00000606296 PCDHB15Q9Y5E8 787 aa9.22□□□□□ -0.93
SATB1-218ENST00000606296 EVC2Q86UK5 1308 aa9.22□□□□□ -0.93
SATB1-218ENST00000606296 NOL8Q76FK4 1167 aaKnown RBP9.22□□□□□ -0.93
SATB1-218ENST00000606296 ARID3AQ99856 593 aa9.22□□□□□ -0.93
SATB1-218ENST00000606296 FAM135AQ9P2D6 1515 aa9.21□□□□□ -0.93
SATB1-218ENST00000606296 TERF2IPQ9NYB0 399 aa9.21□□□□□ -0.93
SATB1-218ENST00000606296 RLBP1P12271 317 aa9.21□□□□□ -0.94
SATB1-218ENST00000606296 NOB1Q9ULX3 412 aaKnown RBP9.21□□□□□ -0.94
SATB1-218ENST00000606296 UHRF1BP1Q6BDS2 1440 aa9.21□□□□□ -0.94
SATB1-218ENST00000606296 LRRIQ1Q96JM4 1722 aa9.21□□□□□ -0.94
SATB1-218ENST00000606296 C14orf37Q86TY3 774 aa9.21□□□□□ -0.94
SATB1-218ENST00000606296 DDX19BQ9UMR2 479 aa9.21□□□□□ -0.94
SATB1-218ENST00000606296 NKTRP30414 1462 aaKnown RBP9.21□□□□□ -0.94
SATB1-218ENST00000606296 NSD3Q9BZ95 1437 aa9.2□□□□□ -0.94
SATB1-218ENST00000606296 GLIPR1L2Q4G1C9 344 aa9.2□□□□□ -0.94
SATB1-218ENST00000606296 GBP4Q96PP9 640 aa9.2□□□□□ -0.94
SATB1-218ENST00000606296 CARD14Q9BXL6 1004 aa9.2□□□□□ -0.94
SATB1-218ENST00000606296 CHMP5Q9NZZ3 219 aa9.2□□□□□ -0.94
SATB1-218ENST00000606296 FOXD4L6Q3SYB3 417 aaPredicted RBP9.2□□□□□ -0.94
SATB1-218ENST00000606296 FOXD4L3Q6VB84 417 aaPredicted RBP9.2□□□□□ -0.94
SATB1-218ENST00000606296 DIAPH1O60610 1272 aaKnown RBP9.2□□□□□ -0.94
SATB1-218ENST00000606296 SLC4A10Q6U841 1118 aa9.2□□□□□ -0.94
SATB1-218ENST00000606296 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
SATB1-218ENST00000606296 KDM2BQ8NHM5 1336 aa9.19□□□□□ -0.94
SATB1-218ENST00000606296 A2MP01023 1474 aa9.19□□□□□ -0.94
SATB1-218ENST00000606296 TRAK2O60296 914 aa9.19□□□□□ -0.94
SATB1-218ENST00000606296 THUMPD2Q9BTF0 503 aaKnown RBP9.19□□□□□ -0.94
SATB1-218ENST00000606296 FBLN1P23142 703 aa9.19□□□□□ -0.94
SATB1-218ENST00000606296 MVPQ14764 893 aaKnown RBP9.19□□□□□ -0.94
SATB1-218ENST00000606296 NGEFQ8N5V2 710 aa9.19□□□□□ -0.94
SATB1-218ENST00000606296 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
SATB1-218ENST00000606296 KDM5CP41229 1560 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms