RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 KDM5AP29375 1690 aaKnown RBP18.57■□□□□ 0.56
PDLIM1P1-201ENST00000604187 CFAP65Q6ZU64 1925 aaKnown RBP18.57■□□□□ 0.56
PDLIM1P1-201ENST00000604187 SPATA31A6Q5VVP1 1343 aa18.56■□□□□ 0.56
PDLIM1P1-201ENST00000604187 PPP1R15AO75807 674 aaPredicted RBP18.56■□□□□ 0.56
PDLIM1P1-201ENST00000604187 ZNF772Q68DY9 489 aaPredicted RBP18.56■□□□□ 0.56
PDLIM1P1-201ENST00000604187 PHLPP1O60346 1717 aa18.56■□□□□ 0.56
PDLIM1P1-201ENST00000604187 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
PDLIM1P1-201ENST00000604187 CHIC2Q9UKJ5 165 aa18.55■□□□□ 0.56
PDLIM1P1-201ENST00000604187 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
PDLIM1P1-201ENST00000604187 PLEKHG1Q9ULL1 1385 aa18.55■□□□□ 0.56
PDLIM1P1-201ENST00000604187 COL16A1Q07092 1604 aaPredicted RBP18.54■□□□□ 0.56
PDLIM1P1-201ENST00000604187 C14orf37Q86TY3 774 aa18.54■□□□□ 0.56
PDLIM1P1-201ENST00000604187 FGD6Q6ZV73 1430 aa18.54■□□□□ 0.56
PDLIM1P1-201ENST00000604187 ZFYVE9O95405 1425 aa18.53■□□□□ 0.56
PDLIM1P1-201ENST00000604187 CROCC2H7BZ55 1655 aa18.52■□□□□ 0.56
PDLIM1P1-201ENST00000604187 RIMS2Q9UQ26 1411 aa18.51■□□□□ 0.55
PDLIM1P1-201ENST00000604187 PTPN23Q9H3S7 1636 aa18.5■□□□□ 0.55
PDLIM1P1-201ENST00000604187 NCOA3Q9Y6Q9 1424 aa18.49■□□□□ 0.55
PDLIM1P1-201ENST00000604187 SRCAPQ6ZRS2 3230 aa18.49■□□□□ 0.55
PDLIM1P1-201ENST00000604187 RXRBP28702 533 aa18.48■□□□□ 0.55
PDLIM1P1-201ENST00000604187 CADPS2Q86UW7 1296 aa18.48■□□□□ 0.55
PDLIM1P1-201ENST00000604187 TBX22Q9Y458 520 aa18.48■□□□□ 0.55
PDLIM1P1-201ENST00000604187 ATF3P18847 181 aa18.47■□□□□ 0.55
PDLIM1P1-201ENST00000604187 HDGFP51858 240 aaKnown RBP18.47■□□□□ 0.55
PDLIM1P1-201ENST00000604187 RPRD2Q5VT52 1461 aaKnown RBP18.46■□□□□ 0.55
PDLIM1P1-201ENST00000604187 C19orf44Q9H6X5 657 aa18.46■□□□□ 0.55
PDLIM1P1-201ENST00000604187 AHDC1Q5TGY3 1603 aaPredicted RBP18.45■□□□□ 0.54
PDLIM1P1-201ENST00000604187 NUTM2BA6NNL0 878 aaPredicted RBP18.45■□□□□ 0.54
PDLIM1P1-201ENST00000604187 NUTM2EB1AL46 878 aaPredicted RBP18.45■□□□□ 0.54
PDLIM1P1-201ENST00000604187 NUTM2AQ8IVF1 878 aaPredicted RBP18.45■□□□□ 0.54
PDLIM1P1-201ENST00000604187 ADAMTS13Q76LX8 1427 aa18.44■□□□□ 0.54
PDLIM1P1-201ENST00000604187 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
PDLIM1P1-201ENST00000604187 NUTM2DQ5VT03 806 aaPredicted RBP18.44■□□□□ 0.54
PDLIM1P1-201ENST00000604187 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
PDLIM1P1-201ENST00000604187 BRINP3Q76B58 766 aa18.43■□□□□ 0.54
PDLIM1P1-201ENST00000604187 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.43■□□□□ 0.54
PDLIM1P1-201ENST00000604187 CDK12Q9NYV4 1490 aaPredicted RBP18.42■□□□□ 0.54
PDLIM1P1-201ENST00000604187 AFF2P51816 1311 aa18.42■□□□□ 0.54
PDLIM1P1-201ENST00000604187 ADRA2BP18089 450 aa18.41■□□□□ 0.54
PDLIM1P1-201ENST00000604187 APLP2Q06481 763 aa18.41■□□□□ 0.54
PDLIM1P1-201ENST00000604187 ANKRD50Q9ULJ7 1429 aa18.4■□□□□ 0.54
PDLIM1P1-201ENST00000604187 PIK3R4Q99570 1358 aa18.4■□□□□ 0.54
PDLIM1P1-201ENST00000604187 ADGRL2O95490 1459 aa18.39■□□□□ 0.54
PDLIM1P1-201ENST00000604187 SHPRHQ149N8 1683 aa18.39■□□□□ 0.53
PDLIM1P1-201ENST00000604187 DIP2AQ14689 1571 aa18.38■□□□□ 0.53
PDLIM1P1-201ENST00000604187 TMEM131LA2VDJ0 1609 aa18.38■□□□□ 0.53
PDLIM1P1-201ENST00000604187 CHD2O14647 1828 aaKnown RBP18.38■□□□□ 0.53
PDLIM1P1-201ENST00000604187 AMOTL2Q9Y2J4 779 aa18.38■□□□□ 0.53
PDLIM1P1-201ENST00000604187 RGS12O14924 1447 aa18.36■□□□□ 0.53
PDLIM1P1-201ENST00000604187 ASXL1Q8IXJ9 1541 aa18.36■□□□□ 0.53
PDLIM1P1-201ENST00000604187 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.35■□□□□ 0.53
PDLIM1P1-201ENST00000604187 GCC2Q8IWJ2 1684 aa18.35■□□□□ 0.53
PDLIM1P1-201ENST00000604187 DCCP43146 1447 aa18.35■□□□□ 0.53
PDLIM1P1-201ENST00000604187 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
PDLIM1P1-201ENST00000604187 C8orf37Q96NL8 207 aa18.35■□□□□ 0.53
PDLIM1P1-201ENST00000604187 SETD5Q9C0A6 1442 aa18.34■□□□□ 0.53
PDLIM1P1-201ENST00000604187 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
PDLIM1P1-201ENST00000604187 TRPM2O94759 1503 aa18.33■□□□□ 0.52
PDLIM1P1-201ENST00000604187 RBM6P78332 1123 aaKnown RBP18.32■□□□□ 0.52
PDLIM1P1-201ENST00000604187 MST1RQ04912 1400 aa18.32■□□□□ 0.52
PDLIM1P1-201ENST00000604187 LRRC59Q96AG4 307 aaKnown RBP18.31■□□□□ 0.52
PDLIM1P1-201ENST00000604187 QTRT2Q9H974 415 aaKnown RBP18.31■□□□□ 0.52
PDLIM1P1-201ENST00000604187 DDX17Q92841 729 aaKnown RBP18.3■□□□□ 0.52
PDLIM1P1-201ENST00000604187 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
PDLIM1P1-201ENST00000604187 MYO5BQ9ULV0 1848 aa18.28■□□□□ 0.52
PDLIM1P1-201ENST00000604187 ADAMTS2O95450 1211 aa18.26■□□□□ 0.51
PDLIM1P1-201ENST00000604187 UNC13BO14795 1591 aa18.25■□□□□ 0.51
PDLIM1P1-201ENST00000604187 NGLY1Q96IV0 654 aa18.25■□□□□ 0.51
PDLIM1P1-201ENST00000604187 ATAD2Q6PL18 1390 aa18.25■□□□□ 0.51
PDLIM1P1-201ENST00000604187 METP08581 1390 aa18.24■□□□□ 0.51
PDLIM1P1-201ENST00000604187 ADGRL3Q9HAR2 1447 aa18.23■□□□□ 0.51
PDLIM1P1-201ENST00000604187 XRN1Q8IZH2 1706 aaKnown RBP18.23■□□□□ 0.51
PDLIM1P1-201ENST00000604187 NHSL1Q5SYE7 1610 aa18.22■□□□□ 0.51
PDLIM1P1-201ENST00000604187 E9PCH4 1651 aa18.21■□□□□ 0.51
PDLIM1P1-201ENST00000604187 SETBP1Q9Y6X0 1596 aa18.21■□□□□ 0.51
PDLIM1P1-201ENST00000604187 NUP155O75694 1391 aa18.2■□□□□ 0.5
PDLIM1P1-201ENST00000604187 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
PDLIM1P1-201ENST00000604187 USP21Q9UK80 565 aa18.19■□□□□ 0.5
PDLIM1P1-201ENST00000604187 NRXN3Q9Y4C0 1643 aa18.19■□□□□ 0.5
PDLIM1P1-201ENST00000604187 ZRANB1Q9UGI0 708 aa18.18■□□□□ 0.5
PDLIM1P1-201ENST00000604187 C1orf167Q5SNV9 1468 aa18.18■□□□□ 0.5
PDLIM1P1-201ENST00000604187 TRPC5Q9UL62 973 aaPredicted RBP18.17■□□□□ 0.5
PDLIM1P1-201ENST00000604187 ROCK1Q13464 1354 aa18.17■□□□□ 0.5
PDLIM1P1-201ENST00000604187 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
PDLIM1P1-201ENST00000604187 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
PDLIM1P1-201ENST00000604187 SOS2Q07890 1332 aaPredicted RBP18.14■□□□□ 0.49
PDLIM1P1-201ENST00000604187 FNBP4Q8N3X1 1017 aaPredicted RBP18.13■□□□□ 0.49
PDLIM1P1-201ENST00000604187 ORAI2Q96SN7 254 aa18.13■□□□□ 0.49
PDLIM1P1-201ENST00000604187 PTCH1Q13635 1447 aa18.13■□□□□ 0.49
PDLIM1P1-201ENST00000604187 ATRNO75882 1429 aa18.12■□□□□ 0.49
PDLIM1P1-201ENST00000604187 EP400Q96L91 3159 aa18.11■□□□□ 0.49
PDLIM1P1-201ENST00000604187 NALCNQ8IZF0 1738 aa18.1■□□□□ 0.49
PDLIM1P1-201ENST00000604187 ROBO2Q9HCK4 1378 aa18.09■□□□□ 0.49
PDLIM1P1-201ENST00000604187 ITGAEP38570 1179 aa18.08■□□□□ 0.48
PDLIM1P1-201ENST00000604187 CCDC125Q86Z20 511 aa18.07■□□□□ 0.48
PDLIM1P1-201ENST00000604187 NEXMIFQ5QGS0 1516 aa18.07■□□□□ 0.48
PDLIM1P1-201ENST00000604187 MYOM2P54296 1465 aa18.07■□□□□ 0.48
PDLIM1P1-201ENST00000604187 LAMC1P11047 1609 aa18.06■□□□□ 0.48
PDLIM1P1-201ENST00000604187 BCL9LQ86UU0 1499 aa18.05■□□□□ 0.48
PDLIM1P1-201ENST00000604187 GJD4Q96KN9 370 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms