RNA–Protein interactions for RNA: ENST00000604103.1

FOCAD-212, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-212ENST00000604103 METTL3Q86U44 580 aaKnown RBP9.42□□□□□ -0.9
FOCAD-212ENST00000604103 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
FOCAD-212ENST00000604103 TJAP1Q5JTD0 557 aa9.4□□□□□ -0.9
FOCAD-212ENST00000604103 NLRP7Q8WX94 980 aa9.4□□□□□ -0.9
FOCAD-212ENST00000604103 MTRQ99707 1265 aa9.4□□□□□ -0.9
FOCAD-212ENST00000604103 NECTIN2Q92692 538 aa9.39□□□□□ -0.91
FOCAD-212ENST00000604103 COPS2P61201 443 aa9.37□□□□□ -0.91
FOCAD-212ENST00000604103 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.37□□□□□ -0.91
FOCAD-212ENST00000604103 ZNF516Q92618 1163 aa9.37□□□□□ -0.91
FOCAD-212ENST00000604103 IL21Q9HBE4 155 aa9.37□□□□□ -0.91
FOCAD-212ENST00000604103 SLC10A3P09131 477 aa9.36□□□□□ -0.91
FOCAD-212ENST00000604103 PHOX2BQ99453 314 aa9.36□□□□□ -0.91
FOCAD-212ENST00000604103 CFHP08603 1231 aa9.35□□□□□ -0.91
FOCAD-212ENST00000604103 LMOD2Q6P5Q4 547 aa9.34□□□□□ -0.91
FOCAD-212ENST00000604103 MAP2K5Q13163 448 aa9.33□□□□□ -0.92
FOCAD-212ENST00000604103 PRR14Q9BWN1 585 aa9.33□□□□□ -0.92
FOCAD-212ENST00000604103 PCDHB3Q9Y5E6 796 aa9.33□□□□□ -0.92
FOCAD-212ENST00000604103 KMT5BQ4FZB7 885 aa9.32□□□□□ -0.92
FOCAD-212ENST00000604103 DAXXQ9UER7 740 aaPredicted RBP9.32□□□□□ -0.92
FOCAD-212ENST00000604103 BLOC1S3Q6QNY0 202 aa9.31□□□□□ -0.92
FOCAD-212ENST00000604103 NKX2-3Q8TAU0 364 aa9.31□□□□□ -0.92
FOCAD-212ENST00000604103 DDX11L8A8MPP1 907 aa9.3□□□□□ -0.92
FOCAD-212ENST00000604103 ACTN4O43707 911 aaKnown RBP9.3□□□□□ -0.92
FOCAD-212ENST00000604103 RDH13Q8NBN7 331 aa9.3□□□□□ -0.92
FOCAD-212ENST00000604103 IRF6O14896 467 aa9.29□□□□□ -0.92
FOCAD-212ENST00000604103 ZPR1O75312 459 aa9.28□□□□□ -0.92
FOCAD-212ENST00000604103 CCDC102AQ96A19 550 aa9.28□□□□□ -0.92
FOCAD-212ENST00000604103 MINK1Q8N4C8 1332 aaPredicted RBP9.28□□□□□ -0.92
FOCAD-212ENST00000604103 RGS20O76081 388 aa9.27□□□□□ -0.93
FOCAD-212ENST00000604103 RSPH4AQ5TD94 716 aa9.27□□□□□ -0.93
FOCAD-212ENST00000604103 TLL1O43897 1013 aa9.26□□□□□ -0.93
FOCAD-212ENST00000604103 PPP1R18Q6NYC8 613 aa9.26□□□□□ -0.93
FOCAD-212ENST00000604103 MDM2Q00987 491 aaPredicted RBP9.25□□□□□ -0.93
FOCAD-212ENST00000604103 PUS10Q3MIT2 529 aaKnown RBP9.25□□□□□ -0.93
FOCAD-212ENST00000604103 SULF1Q8IWU6 871 aa9.23□□□□□ -0.93
FOCAD-212ENST00000604103 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
FOCAD-212ENST00000604103 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
FOCAD-212ENST00000604103 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.22□□□□□ -0.93
FOCAD-212ENST00000604103 SLC24A1O60721 1099 aa9.21□□□□□ -0.94
FOCAD-212ENST00000604103 GCGRP47871 477 aa9.21□□□□□ -0.94
FOCAD-212ENST00000604103 FUT2Q10981 343 aa9.21□□□□□ -0.94
FOCAD-212ENST00000604103 NR1I2O75469 434 aa9.2□□□□□ -0.94
FOCAD-212ENST00000604103 ZMYND10O75800 440 aa9.2□□□□□ -0.94
FOCAD-212ENST00000604103 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
FOCAD-212ENST00000604103 SCUBE3Q8IX30 993 aa9.19□□□□□ -0.94
FOCAD-212ENST00000604103 CD46P15529 392 aa9.18□□□□□ -0.94
FOCAD-212ENST00000604103 GGCXP38435 758 aa9.18□□□□□ -0.94
FOCAD-212ENST00000604103 PRKD2Q9BZL6 878 aa9.18□□□□□ -0.94
FOCAD-212ENST00000604103 ADH1BP00325 375 aa9.17□□□□□ -0.94
FOCAD-212ENST00000604103 ATP6V1AP38606 617 aa9.17□□□□□ -0.94
FOCAD-212ENST00000604103 MORN1Q5T089 497 aa9.17□□□□□ -0.94
FOCAD-212ENST00000604103 S1PR4O95977 384 aa9.16□□□□□ -0.94
FOCAD-212ENST00000604103 IRX2Q9BZI1 471 aaPredicted RBP9.16□□□□□ -0.94
FOCAD-212ENST00000604103 GPCPD1Q9NPB8 672 aa9.16□□□□□ -0.94
FOCAD-212ENST00000604103 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
FOCAD-212ENST00000604103 PPEF1O14829 653 aaPredicted RBP9.15□□□□□ -0.94
FOCAD-212ENST00000604103 CLCN1P35523 988 aa9.15□□□□□ -0.94
FOCAD-212ENST00000604103 REPIN1Q9BWE0 567 aaKnown RBP9.15□□□□□ -0.94
FOCAD-212ENST00000604103 SLC27A5Q9Y2P5 690 aa9.15□□□□□ -0.94
FOCAD-212ENST00000604103 TMUB1Q9BVT8 246 aa9.14□□□□□ -0.95
FOCAD-212ENST00000604103 SPSB2Q99619 263 aa9.13□□□□□ -0.95
FOCAD-212ENST00000604103 FAM217BQ9NTX9 383 aaPredicted RBP9.13□□□□□ -0.95
FOCAD-212ENST00000604103 KDM4AO75164 1064 aa9.12□□□□□ -0.95
FOCAD-212ENST00000604103 SLC6A16Q9GZN6 736 aa9.12□□□□□ -0.95
FOCAD-212ENST00000604103 TTLL12Q14166 644 aaPredicted RBP9.11□□□□□ -0.95
FOCAD-212ENST00000604103 THAP11Q96EK4 314 aa9.11□□□□□ -0.95
FOCAD-212ENST00000604103 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
FOCAD-212ENST00000604103 HLA-CQ95604 372 aa9.1□□□□□ -0.95
FOCAD-212ENST00000604103 V9GY48 417 aaPredicted RBP9.1□□□□□ -0.95
FOCAD-212ENST00000604103 FMNL1O95466 1100 aaPredicted RBP9.09□□□□□ -0.95
FOCAD-212ENST00000604103 RNF19BQ6ZMZ0 732 aa9.09□□□□□ -0.95
FOCAD-212ENST00000604103 ANKLE1Q8NAG6 615 aa9.09□□□□□ -0.95
FOCAD-212ENST00000604103 EMID1Q96A84 441 aaPredicted RBP9.09□□□□□ -0.95
FOCAD-212ENST00000604103 SSTR3P32745 418 aaPredicted RBP9.08□□□□□ -0.96
FOCAD-212ENST00000604103 AMHR2Q16671 573 aa9.08□□□□□ -0.96
FOCAD-212ENST00000604103 BRICD5Q6PL45 260 aa9.08□□□□□ -0.96
FOCAD-212ENST00000604103 TRIM66O15016 1216 aa9.07□□□□□ -0.96
FOCAD-212ENST00000604103 HOXA2O43364 376 aa9.07□□□□□ -0.96
FOCAD-212ENST00000604103 GUCA2AQ02747 115 aa9.07□□□□□ -0.96
FOCAD-212ENST00000604103 FAM160A2Q8N612 972 aaPredicted RBP9.07□□□□□ -0.96
FOCAD-212ENST00000604103 PRDM9Q9NQV7 894 aa9.07□□□□□ -0.96
FOCAD-212ENST00000604103 SLC19A1P41440 591 aa9.06□□□□□ -0.96
FOCAD-212ENST00000604103 USP46P62068 366 aa9.06□□□□□ -0.96
FOCAD-212ENST00000604103 PLA2G2CQ5R387 149 aa9.06□□□□□ -0.96
FOCAD-212ENST00000604103 GIGYF2Q6Y7W6 1299 aaKnown RBP9.06□□□□□ -0.96
FOCAD-212ENST00000604103 AK7Q96M32 723 aa9.06□□□□□ -0.96
FOCAD-212ENST00000604103 LIAT1Q6ZQX7 453 aa9.05□□□□□ -0.96
FOCAD-212ENST00000604103 NUTM1Q86Y26 1132 aa9.05□□□□□ -0.96
FOCAD-212ENST00000604103 BCANQ96GW7 911 aa9.05□□□□□ -0.96
FOCAD-212ENST00000604103 SALL2Q9Y467 1007 aaPredicted RBP9.05□□□□□ -0.96
FOCAD-212ENST00000604103 GFRA3O60609 400 aa9.04□□□□□ -0.96
FOCAD-212ENST00000604103 Q3C1V9 767 aa9.04□□□□□ -0.96
FOCAD-212ENST00000604103 PARP9Q8IXQ6 854 aa9.04□□□□□ -0.96
FOCAD-212ENST00000604103 SLC24A3Q9HC58 644 aa9.04□□□□□ -0.96
FOCAD-212ENST00000604103 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
FOCAD-212ENST00000604103 MSS51Q4VC12 460 aa9.02□□□□□ -0.97
FOCAD-212ENST00000604103 SPRYD7Q5W111 196 aa9.01□□□□□ -0.97
FOCAD-212ENST00000604103 Q6ZNB5 142 aa9.01□□□□□ -0.97
FOCAD-212ENST00000604103 SPIRE2Q8WWL2 714 aa9.01□□□□□ -0.97
FOCAD-212ENST00000604103 SYMPKQ92797 1274 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms