RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 PRR20EP86478 221 aa4.4□□□□□ -1.7
CEP290-208ENST00000604024 PRR20CP86479 221 aa4.4□□□□□ -1.7
CEP290-208ENST00000604024 PRR20DP86480 221 aa4.4□□□□□ -1.7
CEP290-208ENST00000604024 PRR20BP86481 221 aa4.4□□□□□ -1.7
CEP290-208ENST00000604024 PRR20AP86496 221 aa4.4□□□□□ -1.7
CEP290-208ENST00000604024 P3H3Q8IVL6 736 aa4.4□□□□□ -1.71
CEP290-208ENST00000604024 CDHR5Q9HBB8 845 aa4.4□□□□□ -1.71
CEP290-208ENST00000604024 ANKLE1Q8NAG6 615 aa4.39□□□□□ -1.71
CEP290-208ENST00000604024 NR1I2O75469 434 aa4.39□□□□□ -1.71
CEP290-208ENST00000604024 FCHSD2O94868 740 aa4.39□□□□□ -1.71
CEP290-208ENST00000604024 OATP04181 439 aa4.39□□□□□ -1.71
CEP290-208ENST00000604024 CFAP44Q96MT7 982 aa4.38□□□□□ -1.71
CEP290-208ENST00000604024 PCDHB3Q9Y5E6 796 aa4.38□□□□□ -1.71
CEP290-208ENST00000604024 C3orf80F5H4A9 247 aa4.38□□□□□ -1.71
CEP290-208ENST00000604024 SMAPO00193 183 aa4.38□□□□□ -1.71
CEP290-208ENST00000604024 TMEM134Q9H6X4 195 aa4.38□□□□□ -1.71
CEP290-208ENST00000604024 ADGRG1Q9Y653 693 aa4.38□□□□□ -1.71
CEP290-208ENST00000604024 PTGDRQ13258 359 aa4.37□□□□□ -1.71
CEP290-208ENST00000604024 SMYD5Q6GMV2 418 aa4.37□□□□□ -1.71
CEP290-208ENST00000604024 RPIAP49247 311 aa4.37□□□□□ -1.71
CEP290-208ENST00000604024 ZNF598Q86UK7 904 aaKnown RBP4.37□□□□□ -1.71
CEP290-208ENST00000604024 ADH1BP00325 375 aa4.37□□□□□ -1.71
CEP290-208ENST00000604024 ZNF516Q92618 1163 aa4.37□□□□□ -1.71
CEP290-208ENST00000604024 SLC19A1P41440 591 aa4.36□□□□□ -1.71
CEP290-208ENST00000604024 KRTAP1-3Q8IUG1 177 aa4.36□□□□□ -1.71
CEP290-208ENST00000604024 PDZRN3Q9UPQ7 1066 aa4.36□□□□□ -1.71
CEP290-208ENST00000604024 ZNF787Q6DD87 383 aa4.35□□□□□ -1.71
CEP290-208ENST00000604024 SPRYD7Q5W111 196 aa4.34□□□□□ -1.71
CEP290-208ENST00000604024 SALL2Q9Y467 1007 aaPredicted RBP4.34□□□□□ -1.71
CEP290-208ENST00000604024 RCCD1A6NED2 376 aa4.34□□□□□ -1.72
CEP290-208ENST00000604024 HIC1Q14526 733 aa4.33□□□□□ -1.72
CEP290-208ENST00000604024 BLOC1S3Q6QNY0 202 aa4.33□□□□□ -1.72
CEP290-208ENST00000604024 RNF223E7ERA6 249 aa4.32□□□□□ -1.72
CEP290-208ENST00000604024 LCE2BO14633 110 aa4.32□□□□□ -1.72
CEP290-208ENST00000604024 NKX2-3Q8TAU0 364 aa4.32□□□□□ -1.72
CEP290-208ENST00000604024 PXYLP1Q8TE99 480 aa4.32□□□□□ -1.72
CEP290-208ENST00000604024 SLC6A16Q9GZN6 736 aa4.32□□□□□ -1.72
CEP290-208ENST00000604024 DAXXQ9UER7 740 aaPredicted RBP4.32□□□□□ -1.72
CEP290-208ENST00000604024 RNF40O75150 1001 aa4.31□□□□□ -1.72
CEP290-208ENST00000604024 CFHP08603 1231 aa4.31□□□□□ -1.72
CEP290-208ENST00000604024 COPS2P61201 443 aa4.31□□□□□ -1.72
CEP290-208ENST00000604024 CRIPAKQ8N1N5 446 aa4.31□□□□□ -1.72
CEP290-208ENST00000604024 GDF9O60383 454 aa4.3□□□□□ -1.72
CEP290-208ENST00000604024 MLLT3P42568 568 aaPredicted RBP4.3□□□□□ -1.72
CEP290-208ENST00000604024 SMCPP49901 116 aaPredicted RBP4.3□□□□□ -1.72
CEP290-208ENST00000604024 TESPA1A2RU30 521 aaPredicted RBP4.3□□□□□ -1.72
CEP290-208ENST00000604024 MYT1Q01538 1121 aa4.3□□□□□ -1.72
CEP290-208ENST00000604024 KCNV2Q8TDN2 545 aa4.3□□□□□ -1.72
CEP290-208ENST00000604024 NUTM2FA1L443 756 aa4.3□□□□□ -1.72
CEP290-208ENST00000604024 PKDCCQ504Y2 493 aa4.3□□□□□ -1.72
CEP290-208ENST00000604024 AVPP01185 164 aa4.29□□□□□ -1.72
CEP290-208ENST00000604024 CTC1Q2NKJ3 1217 aa4.29□□□□□ -1.72
CEP290-208ENST00000604024 GRIPAP1Q4V328 841 aa4.29□□□□□ -1.72
CEP290-208ENST00000604024 MSS51Q4VC12 460 aa4.29□□□□□ -1.72
CEP290-208ENST00000604024 LIAT1Q6ZQX7 453 aa4.29□□□□□ -1.72
CEP290-208ENST00000604024 SULF1Q8IWU6 871 aa4.29□□□□□ -1.72
CEP290-208ENST00000604024 EMID1Q96A84 441 aaPredicted RBP4.29□□□□□ -1.72
CEP290-208ENST00000604024 FMNL1O95466 1100 aaPredicted RBP4.29□□□□□ -1.72
CEP290-208ENST00000604024 ZNF697Q5TEC3 545 aa4.29□□□□□ -1.72
CEP290-208ENST00000604024 TRIM67Q6ZTA4 783 aa4.29□□□□□ -1.72
CEP290-208ENST00000604024 TSHZ2Q9NRE2 1034 aa4.29□□□□□ -1.72
CEP290-208ENST00000604024 CD2BP2O95400 341 aaKnown RBP4.28□□□□□ -1.72
CEP290-208ENST00000604024 SLC10A3P09131 477 aa4.28□□□□□ -1.72
CEP290-208ENST00000604024 GNPATO15228 680 aa4.28□□□□□ -1.72
CEP290-208ENST00000604024 Q3C1V9 767 aa4.28□□□□□ -1.72
CEP290-208ENST00000604024 RTN4Q9NQC3 1192 aaKnown RBP4.28□□□□□ -1.72
CEP290-208ENST00000604024 ATP6V1AP38606 617 aa4.27□□□□□ -1.73
CEP290-208ENST00000604024 MORN1Q5T089 497 aa4.27□□□□□ -1.73
CEP290-208ENST00000604024 S1PR4O95977 384 aa4.27□□□□□ -1.73
CEP290-208ENST00000604024 GCGRP47871 477 aa4.27□□□□□ -1.73
CEP290-208ENST00000604024 SCUBE3Q8IX30 993 aa4.26□□□□□ -1.73
CEP290-208ENST00000604024 THAP11Q96EK4 314 aa4.26□□□□□ -1.73
CEP290-208ENST00000604024 SPSB2Q99619 263 aa4.26□□□□□ -1.73
CEP290-208ENST00000604024 METTL3Q86U44 580 aaKnown RBP4.26□□□□□ -1.73
CEP290-208ENST00000604024 USP46P62068 366 aa4.25□□□□□ -1.73
CEP290-208ENST00000604024 TREML4Q6UXN2 200 aa4.25□□□□□ -1.73
CEP290-208ENST00000604024 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
CEP290-208ENST00000604024 PKD2L1Q9P0L9 805 aa4.25□□□□□ -1.73
CEP290-208ENST00000604024 BRICD5Q6PL45 260 aa4.25□□□□□ -1.73
CEP290-208ENST00000604024 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.24□□□□□ -1.73
CEP290-208ENST00000604024 TOR4AQ9NXH8 423 aa4.24□□□□□ -1.73
CEP290-208ENST00000604024 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
CEP290-208ENST00000604024 ZNF775Q96BV0 537 aaPredicted RBP4.24□□□□□ -1.73
CEP290-208ENST00000604024 FAM187AA6NFU0 413 aa4.23□□□□□ -1.73
CEP290-208ENST00000604024 GPR37O15354 613 aa4.23□□□□□ -1.73
CEP290-208ENST00000604024 TLL1O43897 1013 aa4.23□□□□□ -1.73
CEP290-208ENST00000604024 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
CEP290-208ENST00000604024 MMP16P51512 607 aa4.23□□□□□ -1.73
CEP290-208ENST00000604024 PSMG3-AS1Q96PY0 264 aa4.23□□□□□ -1.73
CEP290-208ENST00000604024 WNT7AO00755 349 aa4.23□□□□□ -1.73
CEP290-208ENST00000604024 CYP4X1Q8N118 509 aa4.23□□□□□ -1.73
CEP290-208ENST00000604024 KIFC2Q96AC6 838 aa4.23□□□□□ -1.73
CEP290-208ENST00000604024 AAASQ9NRG9 546 aa4.23□□□□□ -1.73
CEP290-208ENST00000604024 SNIP1Q8TAD8 396 aaKnown RBP4.22□□□□□ -1.73
CEP290-208ENST00000604024 SENP2Q9HC62 589 aa4.22□□□□□ -1.73
CEP290-208ENST00000604024 FAM160A2Q8N612 972 aaPredicted RBP4.22□□□□□ -1.73
CEP290-208ENST00000604024 RDH13Q8NBN7 331 aa4.22□□□□□ -1.73
CEP290-208ENST00000604024 REPIN1Q9BWE0 567 aaKnown RBP4.22□□□□□ -1.73
CEP290-208ENST00000604024 PPEF1O14829 653 aaPredicted RBP4.21□□□□□ -1.74
CEP290-208ENST00000604024 ZBTB24O43167 697 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms