RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
TUBE1-205ENST00000603651 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
TUBE1-205ENST00000603651 MTRQ99707 1265 aa13.03□□□□□ -0.32
TUBE1-205ENST00000603651 COPS2P61201 443 aa13.01□□□□□ -0.33
TUBE1-205ENST00000603651 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
TUBE1-205ENST00000603651 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
TUBE1-205ENST00000603651 A0A0G2JS52 829 aa13□□□□□ -0.33
TUBE1-205ENST00000603651 TJAP1Q5JTD0 557 aa12.99□□□□□ -0.33
TUBE1-205ENST00000603651 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
TUBE1-205ENST00000603651 CFHP08603 1231 aa12.98□□□□□ -0.33
TUBE1-205ENST00000603651 ZNF516Q92618 1163 aa12.98□□□□□ -0.33
TUBE1-205ENST00000603651 IL21Q9HBE4 155 aa12.98□□□□□ -0.33
TUBE1-205ENST00000603651 SLC10A3P09131 477 aa12.96□□□□□ -0.33
TUBE1-205ENST00000603651 RDH13Q8NBN7 331 aa12.96□□□□□ -0.33
TUBE1-205ENST00000603651 PHOX2BQ99453 314 aa12.96□□□□□ -0.33
TUBE1-205ENST00000603651 PCDHB3Q9Y5E6 796 aa12.96□□□□□ -0.33
TUBE1-205ENST00000603651 DDX11L8A8MPP1 907 aa12.95□□□□□ -0.34
TUBE1-205ENST00000603651 KMT5BQ4FZB7 885 aa12.95□□□□□ -0.34
TUBE1-205ENST00000603651 MAP2K5Q13163 448 aa12.94□□□□□ -0.34
TUBE1-205ENST00000603651 PRR14Q9BWN1 585 aa12.94□□□□□ -0.34
TUBE1-205ENST00000603651 RSPH4AQ5TD94 716 aa12.92□□□□□ -0.34
TUBE1-205ENST00000603651 BLOC1S3Q6QNY0 202 aa12.92□□□□□ -0.34
TUBE1-205ENST00000603651 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
TUBE1-205ENST00000603651 KRI1Q8N9T8 703 aaKnown RBP12.91□□□□□ -0.34
TUBE1-205ENST00000603651 IRF6O14896 467 aa12.9□□□□□ -0.34
TUBE1-205ENST00000603651 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
TUBE1-205ENST00000603651 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
TUBE1-205ENST00000603651 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
TUBE1-205ENST00000603651 ACTN4O43707 911 aaKnown RBP12.87□□□□□ -0.35
TUBE1-205ENST00000603651 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
TUBE1-205ENST00000603651 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
TUBE1-205ENST00000603651 ZPR1O75312 459 aa12.85□□□□□ -0.35
TUBE1-205ENST00000603651 PUS10Q3MIT2 529 aaKnown RBP12.85□□□□□ -0.35
TUBE1-205ENST00000603651 TLL1O43897 1013 aa12.84□□□□□ -0.35
TUBE1-205ENST00000603651 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
TUBE1-205ENST00000603651 PPP1R18Q6NYC8 613 aa12.82□□□□□ -0.36
TUBE1-205ENST00000603651 SULF1Q8IWU6 871 aa12.82□□□□□ -0.36
TUBE1-205ENST00000603651 NR1I2O75469 434 aa12.78□□□□□ -0.36
TUBE1-205ENST00000603651 FUT2Q10981 343 aa12.78□□□□□ -0.36
TUBE1-205ENST00000603651 BARGINQ6ZT62 677 aa12.78□□□□□ -0.36
TUBE1-205ENST00000603651 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.78□□□□□ -0.36
TUBE1-205ENST00000603651 ZMYND10O75800 440 aa12.77□□□□□ -0.37
TUBE1-205ENST00000603651 RGS20O76081 388 aa12.77□□□□□ -0.37
TUBE1-205ENST00000603651 GCGRP47871 477 aa12.76□□□□□ -0.37
TUBE1-205ENST00000603651 GGCXP38435 758 aa12.75□□□□□ -0.37
TUBE1-205ENST00000603651 SCUBE3Q8IX30 993 aa12.74□□□□□ -0.37
TUBE1-205ENST00000603651 CLCN1P35523 988 aa12.73□□□□□ -0.37
TUBE1-205ENST00000603651 GPCPD1Q9NPB8 672 aa12.73□□□□□ -0.37
TUBE1-205ENST00000603651 S1PR4O95977 384 aa12.72□□□□□ -0.37
TUBE1-205ENST00000603651 ATP6V1AP38606 617 aa12.72□□□□□ -0.37
TUBE1-205ENST00000603651 TTLL12Q14166 644 aaPredicted RBP12.72□□□□□ -0.37
TUBE1-205ENST00000603651 PRKD2Q9BZL6 878 aa12.72□□□□□ -0.37
TUBE1-205ENST00000603651 CD46P15529 392 aa12.71□□□□□ -0.37
TUBE1-205ENST00000603651 PPEF1O14829 653 aaPredicted RBP12.7□□□□□ -0.38
TUBE1-205ENST00000603651 ADH1BP00325 375 aa12.7□□□□□ -0.38
TUBE1-205ENST00000603651 MORN1Q5T089 497 aa12.7□□□□□ -0.38
TUBE1-205ENST00000603651 REPIN1Q9BWE0 567 aaKnown RBP12.69□□□□□ -0.38
TUBE1-205ENST00000603651 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
TUBE1-205ENST00000603651 SPSB2Q99619 263 aa12.68□□□□□ -0.38
TUBE1-205ENST00000603651 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
TUBE1-205ENST00000603651 BCANQ96GW7 911 aa12.67□□□□□ -0.38
TUBE1-205ENST00000603651 SLC6A16Q9GZN6 736 aa12.67□□□□□ -0.38
TUBE1-205ENST00000603651 FAM217BQ9NTX9 383 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-205ENST00000603651 RNF223E7ERA6 249 aa12.66□□□□□ -0.38
TUBE1-205ENST00000603651 KDM4AO75164 1064 aa12.66□□□□□ -0.38
TUBE1-205ENST00000603651 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
TUBE1-205ENST00000603651 HLA-CQ95604 372 aa12.64□□□□□ -0.39
TUBE1-205ENST00000603651 FMNL1O95466 1100 aaPredicted RBP12.63□□□□□ -0.39
TUBE1-205ENST00000603651 SSTR3P32745 418 aaPredicted RBP12.63□□□□□ -0.39
TUBE1-205ENST00000603651 NUTM1Q86Y26 1132 aa12.63□□□□□ -0.39
TUBE1-205ENST00000603651 TMUB1Q9BVT8 246 aa12.63□□□□□ -0.39
TUBE1-205ENST00000603651 AK7Q96M32 723 aa12.62□□□□□ -0.39
TUBE1-205ENST00000603651 TRIM66O15016 1216 aa12.61□□□□□ -0.39
TUBE1-205ENST00000603651 RNF19BQ6ZMZ0 732 aa12.61□□□□□ -0.39
TUBE1-205ENST00000603651 SLC24A3Q9HC58 644 aa12.61□□□□□ -0.39
TUBE1-205ENST00000603651 GUCA2AQ02747 115 aa12.6□□□□□ -0.39
TUBE1-205ENST00000603651 GIGYF2Q6Y7W6 1299 aaKnown RBP12.6□□□□□ -0.39
TUBE1-205ENST00000603651 AMHR2Q16671 573 aa12.58□□□□□ -0.4
TUBE1-205ENST00000603651 ANKLE1Q8NAG6 615 aa12.58□□□□□ -0.4
TUBE1-205ENST00000603651 THAP11Q96EK4 314 aa12.58□□□□□ -0.4
TUBE1-205ENST00000603651 PRDM9Q9NQV7 894 aa12.58□□□□□ -0.4
TUBE1-205ENST00000603651 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
TUBE1-205ENST00000603651 HOXA2O43364 376 aa12.57□□□□□ -0.4
TUBE1-205ENST00000603651 SLC19A1P41440 591 aa12.57□□□□□ -0.4
TUBE1-205ENST00000603651 BRICD5Q6PL45 260 aa12.57□□□□□ -0.4
TUBE1-205ENST00000603651 USP46P62068 366 aa12.56□□□□□ -0.4
TUBE1-205ENST00000603651 Q3C1V9 767 aa12.56□□□□□ -0.4
TUBE1-205ENST00000603651 FAM160A2Q8N612 972 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-205ENST00000603651 PARP9Q8IXQ6 854 aa12.55□□□□□ -0.4
TUBE1-205ENST00000603651 GFRA3O60609 400 aa12.54□□□□□ -0.4
TUBE1-205ENST00000603651 PLA2G2CQ5R387 149 aa12.53□□□□□ -0.4
TUBE1-205ENST00000603651 EMID1Q96A84 441 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-205ENST00000603651 BEGAINQ9BUH8 593 aa12.53□□□□□ -0.4
TUBE1-205ENST00000603651 FCF1Q9Y324 198 aaKnown RBP12.53□□□□□ -0.4
TUBE1-205ENST00000603651 LIAT1Q6ZQX7 453 aa12.52□□□□□ -0.41
TUBE1-205ENST00000603651 SYMPKQ92797 1274 aaKnown RBP12.52□□□□□ -0.41
TUBE1-205ENST00000603651 PDE4DQ08499 809 aa12.51□□□□□ -0.41
TUBE1-205ENST00000603651 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
TUBE1-205ENST00000603651 NDUFV2P19404 249 aa12.5□□□□□ -0.41
TUBE1-205ENST00000603651 Q6ZNB5 142 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms