RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SIRT1Q96EB6 747 aa6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 EMILIN3Q9NT22 766 aa6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 LAS1LQ9Y4W2 734 aaKnown RBP6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 TARBP1Q13395 1621 aaKnown RBP6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 ZMYND10O75800 440 aa6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 DDX27Q96GQ7 796 aaKnown RBP6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 PPP1R1BQ9UD71 204 aaPredicted RBP6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 DPYSL4O14531 572 aa6.79□□□□□ -1.32
SPTBN1-206ENST00000602898 CRISPLD2Q9H0B8 497 aa6.79□□□□□ -1.32
SPTBN1-206ENST00000602898 SHROOM2Q13796 1616 aa6.79□□□□□ -1.32
SPTBN1-206ENST00000602898 C2orf72A6NCS6 295 aa6.79□□□□□ -1.32
SPTBN1-206ENST00000602898 IRX5P78411 483 aaPredicted RBP6.79□□□□□ -1.32
SPTBN1-206ENST00000602898 EXOC8Q8IYI6 725 aa6.79□□□□□ -1.32
SPTBN1-206ENST00000602898 DCBLD2Q96PD2 775 aa6.79□□□□□ -1.32
SPTBN1-206ENST00000602898 ONECUT3O60422 494 aaPredicted RBP6.78□□□□□ -1.32
SPTBN1-206ENST00000602898 SLC52A1Q9NWF4 448 aa6.78□□□□□ -1.32
SPTBN1-206ENST00000602898 FANCD2Q9BXW9 1451 aa6.78□□□□□ -1.32
SPTBN1-206ENST00000602898 URB2Q14146 1524 aaKnown RBP6.77□□□□□ -1.32
SPTBN1-206ENST00000602898 TMTC2Q8N394 836 aa6.77□□□□□ -1.33
SPTBN1-206ENST00000602898 SPATA32Q96LK8 384 aa6.77□□□□□ -1.33
SPTBN1-206ENST00000602898 ASTLQ6HA08 431 aaPredicted RBP6.77□□□□□ -1.33
SPTBN1-206ENST00000602898 POM121Q96HA1 1249 aa6.77□□□□□ -1.33
SPTBN1-206ENST00000602898 RBM27Q9P2N5 1060 aaKnown RBP6.77□□□□□ -1.33
SPTBN1-206ENST00000602898 MAPKBP1O60336 1514 aa6.77□□□□□ -1.33
SPTBN1-206ENST00000602898 FANCIQ9NVI1 1328 aa6.77□□□□□ -1.33
SPTBN1-206ENST00000602898 RBM19Q9Y4C8 960 aaKnown RBP6.77□□□□□ -1.33
SPTBN1-206ENST00000602898 DNMBPQ6XZF7 1577 aa6.76□□□□□ -1.33
SPTBN1-206ENST00000602898 SEC24BO95487 1268 aa6.76□□□□□ -1.33
SPTBN1-206ENST00000602898 RBM26Q5T8P6 1007 aaKnown RBP6.76□□□□□ -1.33
SPTBN1-206ENST00000602898 IGSF5Q9NSI5 407 aa6.76□□□□□ -1.33
SPTBN1-206ENST00000602898 PPME1Q9Y570 386 aa6.76□□□□□ -1.33
SPTBN1-206ENST00000602898 MAGI1Q96QZ7 1491 aaPredicted RBP6.75□□□□□ -1.33
SPTBN1-206ENST00000602898 MAFGO15525 162 aa6.75□□□□□ -1.33
SPTBN1-206ENST00000602898 PPP1R15BQ5SWA1 713 aa6.75□□□□□ -1.33
SPTBN1-206ENST00000602898 PEX14O75381 377 aa6.75□□□□□ -1.33
SPTBN1-206ENST00000602898 SETQ01105 290 aaPredicted RBP6.75□□□□□ -1.33
SPTBN1-206ENST00000602898 ANKRD62A6NC57 917 aa6.74□□□□□ -1.33
SPTBN1-206ENST00000602898 PLEKHD1A6NEE1 506 aa6.74□□□□□ -1.33
SPTBN1-206ENST00000602898 EVI5LQ96CN4 794 aa6.74□□□□□ -1.33
SPTBN1-206ENST00000602898 CCDC97Q96F63 343 aaPredicted RBP6.74□□□□□ -1.33
SPTBN1-206ENST00000602898 DNAJC2Q99543 621 aaKnown RBP6.74□□□□□ -1.33
SPTBN1-206ENST00000602898 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
SPTBN1-206ENST00000602898 ARIH1Q9Y4X5 557 aaPredicted RBP6.74□□□□□ -1.33
SPTBN1-206ENST00000602898 MICAL1Q8TDZ2 1067 aa6.74□□□□□ -1.33
SPTBN1-206ENST00000602898 CHMP4BQ9H444 224 aaKnown RBP6.74□□□□□ -1.33
SPTBN1-206ENST00000602898 BOLA1Q9Y3E2 137 aa6.74□□□□□ -1.33
SPTBN1-206ENST00000602898 ANKRD13AQ8IZ07 590 aa6.73□□□□□ -1.33
SPTBN1-206ENST00000602898 METRNQ9UJH8 293 aa6.73□□□□□ -1.33
SPTBN1-206ENST00000602898 TOP2BQ02880 1626 aa6.73□□□□□ -1.33
SPTBN1-206ENST00000602898 PLCG2P16885 1265 aa6.73□□□□□ -1.33
SPTBN1-206ENST00000602898 HSP90AB4PQ58FF6 505 aa6.73□□□□□ -1.33
SPTBN1-206ENST00000602898 ILDR1Q86SU0 546 aaPredicted RBP6.73□□□□□ -1.33
SPTBN1-206ENST00000602898 APBB1IPQ7Z5R6 666 aaPredicted RBP6.73□□□□□ -1.33
SPTBN1-206ENST00000602898 OCEL1Q9H607 264 aa6.73□□□□□ -1.33
SPTBN1-206ENST00000602898 PDE4AP27815 886 aa6.72□□□□□ -1.33
SPTBN1-206ENST00000602898 GRIPAP1Q4V328 841 aa6.72□□□□□ -1.33
SPTBN1-206ENST00000602898 GIMAP6Q6P9H5 292 aa6.72□□□□□ -1.33
SPTBN1-206ENST00000602898 GPHNQ9NQX3 736 aaPredicted RBP6.72□□□□□ -1.33
SPTBN1-206ENST00000602898 SUGT1Q9Y2Z0 365 aa6.72□□□□□ -1.33
SPTBN1-206ENST00000602898 POTEB2H3BUK9 544 aa6.71□□□□□ -1.33
SPTBN1-206ENST00000602898 RAB11FIP3O75154 756 aa6.71□□□□□ -1.33
SPTBN1-206ENST00000602898 KAT6BQ8WYB5 2073 aa6.71□□□□□ -1.33
SPTBN1-206ENST00000602898 PLEKHG3A1L390 1219 aa6.71□□□□□ -1.34
SPTBN1-206ENST00000602898 TPD52L2O43399 206 aaKnown RBP6.71□□□□□ -1.34
SPTBN1-206ENST00000602898 PLPP6Q8IY26 295 aa6.71□□□□□ -1.34
SPTBN1-206ENST00000602898 GLI2P10070 1586 aa6.71□□□□□ -1.34
SPTBN1-206ENST00000602898 MYH16Q9H6N6 1097 aa6.7□□□□□ -1.34
SPTBN1-206ENST00000602898 GRXCR2A6NFK2 248 aa6.7□□□□□ -1.34
SPTBN1-206ENST00000602898 SPTY2D1Q68D10 685 aaPredicted RBP6.7□□□□□ -1.34
SPTBN1-206ENST00000602898 DDX12PQ92771 950 aa6.7□□□□□ -1.34
SPTBN1-206ENST00000602898 VTI1AQ96AJ9 217 aa6.7□□□□□ -1.34
SPTBN1-206ENST00000602898 POTEJP0CG39 1038 aa6.69□□□□□ -1.34
SPTBN1-206ENST00000602898 FLIIQ13045 1269 aa6.69□□□□□ -1.34
SPTBN1-206ENST00000602898 YTHDC1Q96MU7 727 aaKnown RBP6.69□□□□□ -1.34
SPTBN1-206ENST00000602898 KDM6BO15054 1643 aa6.69□□□□□ -1.34
SPTBN1-206ENST00000602898 A6NJR5 290 aa6.69□□□□□ -1.34
SPTBN1-206ENST00000602898 PATL2C9JE40 543 aaKnown RBP6.69□□□□□ -1.34
SPTBN1-206ENST00000602898 TMC2Q8TDI7 906 aa6.69□□□□□ -1.34
SPTBN1-206ENST00000602898 HIRIP3Q9BW71 556 aaPredicted RBP6.68□□□□□ -1.34
SPTBN1-206ENST00000602898 AMOTL2Q9Y2J4 779 aa6.68□□□□□ -1.34
SPTBN1-206ENST00000602898 MFSD10Q14728 455 aa6.68□□□□□ -1.34
SPTBN1-206ENST00000602898 MRRFQ96E11 262 aaKnown RBP6.67□□□□□ -1.34
SPTBN1-206ENST00000602898 KLHL42Q9P2K6 505 aa6.67□□□□□ -1.34
SPTBN1-206ENST00000602898 MCCP23508 829 aa6.67□□□□□ -1.34
SPTBN1-206ENST00000602898 PDE4DQ08499 809 aa6.67□□□□□ -1.34
SPTBN1-206ENST00000602898 PROSER2Q86WR7 435 aaPredicted RBP6.67□□□□□ -1.34
SPTBN1-206ENST00000602898 SP7Q8TDD2 431 aaPredicted RBP6.67□□□□□ -1.34
SPTBN1-206ENST00000602898 HECW2Q9P2P5 1572 aa6.67□□□□□ -1.34
SPTBN1-206ENST00000602898 DIP2BQ9P265 1576 aa6.67□□□□□ -1.34
SPTBN1-206ENST00000602898 MAP4K4O95819 1239 aaPredicted RBP6.66□□□□□ -1.34
SPTBN1-206ENST00000602898 FBXO41Q8TF61 875 aa6.66□□□□□ -1.34
SPTBN1-206ENST00000602898 ARHGEF1Q92888 912 aaKnown RBP6.66□□□□□ -1.34
SPTBN1-206ENST00000602898 IVNS1ABPQ9Y6Y0 642 aa6.66□□□□□ -1.34
SPTBN1-206ENST00000602898 C11orf95C9JLR9 678 aaPredicted RBP6.66□□□□□ -1.34
SPTBN1-206ENST00000602898 KHSRPQ92945 711 aaKnown RBP eCLIP6.66□□□□□ -1.34
SPTBN1-206ENST00000602898 PRIM1P49642 420 aaKnown RBP6.66□□□□□ -1.34
SPTBN1-206ENST00000602898 MCM6Q14566 821 aa6.66□□□□□ -1.34
SPTBN1-206ENST00000602898 GORABQ5T7V8 394 aa6.66□□□□□ -1.34
SPTBN1-206ENST00000602898 PBRM1Q86U86 1689 aa6.66□□□□□ -1.34
SPTBN1-206ENST00000602898 TOPBP1Q92547 1522 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms