RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 NRXN1Q9ULB1 1477 aa31.08■■■□□ 2.57
PPFIA3-211ENST00000602848 ESF1Q9H501 851 aaKnown RBP31.06■■■□□ 2.56
PPFIA3-211ENST00000602848 CHGAP10645 457 aaKnown RBP31.04■■■□□ 2.56
PPFIA3-211ENST00000602848 PTPRMP28827 1452 aa31.04■■■□□ 2.56
PPFIA3-211ENST00000602848 C11orf95C9JLR9 678 aaPredicted RBP31.03■■■□□ 2.56
PPFIA3-211ENST00000602848 IDI1Q13907 227 aa31.03■■■□□ 2.56
PPFIA3-211ENST00000602848 PPLO60437 1756 aa31.03■■■□□ 2.56
PPFIA3-211ENST00000602848 KIF7Q2M1P5 1343 aa31.02■■■□□ 2.56
PPFIA3-211ENST00000602848 SPATA31D1Q6ZQQ2 1576 aa31.02■■■□□ 2.56
PPFIA3-211ENST00000602848 ST20-MTHFSA0A0A6YYL1 179 aa31.02■■■□□ 2.56
PPFIA3-211ENST00000602848 ADGRF5Q8IZF2 1346 aa30.97■■■□□ 2.55
PPFIA3-211ENST00000602848 FBXO31Q5XUX0 539 aaPredicted RBP30.97■■■□□ 2.55
PPFIA3-211ENST00000602848 C3P01024 1663 aa30.97■■■□□ 2.55
PPFIA3-211ENST00000602848 ZFYVE9O95405 1425 aa30.97■■■□□ 2.55
PPFIA3-211ENST00000602848 ZMYM3Q14202 1370 aa30.96■■■□□ 2.55
PPFIA3-211ENST00000602848 VGFO15240 615 aaPredicted RBP30.96■■■□□ 2.55
PPFIA3-211ENST00000602848 TMEM131LA2VDJ0 1609 aa30.95■■■□□ 2.55
PPFIA3-211ENST00000602848 SCAF11Q99590 1463 aaKnown RBP30.94■■■□□ 2.54
PPFIA3-211ENST00000602848 ANP32CO43423 234 aa30.94■■■□□ 2.54
PPFIA3-211ENST00000602848 IQGAP1P46940 1657 aa30.94■■■□□ 2.54
PPFIA3-211ENST00000602848 NEXMIFQ5QGS0 1516 aa30.92■■■□□ 2.54
PPFIA3-211ENST00000602848 PIK3C2GO75747 1445 aa30.92■■■□□ 2.54
PPFIA3-211ENST00000602848 SETBP1Q9Y6X0 1596 aa30.91■■■□□ 2.54
PPFIA3-211ENST00000602848 CEBPAP49715 358 aaPredicted RBP30.91■■■□□ 2.54
PPFIA3-211ENST00000602848 SLC24A1O60721 1099 aa30.89■■■□□ 2.54
PPFIA3-211ENST00000602848 EIF3AQ14152 1382 aaKnown RBP30.88■■■□□ 2.53
PPFIA3-211ENST00000602848 C14orf93Q9H972 538 aaKnown RBP30.88■■■□□ 2.53
PPFIA3-211ENST00000602848 CFAP70Q5T0N1 1121 aa30.87■■■□□ 2.53
PPFIA3-211ENST00000602848 TESK2Q96S53 571 aa30.85■■■□□ 2.53
PPFIA3-211ENST00000602848 CCER2I3L3R5 266 aa30.84■■■□□ 2.53
PPFIA3-211ENST00000602848 PLPPR3Q6T4P5 718 aa30.82■■■□□ 2.52
PPFIA3-211ENST00000602848 TMF1P82094 1093 aa30.81■■■□□ 2.52
PPFIA3-211ENST00000602848 STAG3Q9UJ98 1225 aa30.81■■■□□ 2.52
PPFIA3-211ENST00000602848 MYO5BQ9ULV0 1848 aa30.81■■■□□ 2.52
PPFIA3-211ENST00000602848 TNRQ92752 1358 aa30.79■■■□□ 2.52
PPFIA3-211ENST00000602848 A2ML1A8K2U0 1454 aa30.78■■■□□ 2.52
PPFIA3-211ENST00000602848 KDM5AP29375 1690 aaKnown RBP30.78■■■□□ 2.52
PPFIA3-211ENST00000602848 CDCA8Q53HL2 280 aa30.76■■■□□ 2.51
PPFIA3-211ENST00000602848 ADGRB1O14514 1584 aa30.75■■■□□ 2.51
PPFIA3-211ENST00000602848 SETD1BQ9UPS6 1966 aaKnown RBP30.74■■■□□ 2.51
PPFIA3-211ENST00000602848 MYO3AQ8NEV4 1616 aa30.71■■■□□ 2.51
PPFIA3-211ENST00000602848 SBNO2Q9Y2G9 1366 aa30.7■■■□□ 2.51
PPFIA3-211ENST00000602848 HDGFP51858 240 aaKnown RBP30.7■■■□□ 2.51
PPFIA3-211ENST00000602848 AEBP2Q6ZN18 517 aaPredicted RBP30.7■■■□□ 2.51
PPFIA3-211ENST00000602848 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.7■■■□□ 2.51
PPFIA3-211ENST00000602848 POLR3GLQ9BT43 218 aa30.7■■■□□ 2.51
PPFIA3-211ENST00000602848 NLRP1Q9C000 1473 aa30.7■■■□□ 2.5
PPFIA3-211ENST00000602848 DISP3Q9P2K9 1392 aa30.69■■■□□ 2.5
PPFIA3-211ENST00000602848 RIMS2Q9UQ26 1411 aa30.67■■■□□ 2.5
PPFIA3-211ENST00000602848 CENPBP07199 599 aaPredicted RBP30.66■■■□□ 2.5
PPFIA3-211ENST00000602848 NUTM2DQ5VT03 806 aaPredicted RBP30.64■■■□□ 2.5
PPFIA3-211ENST00000602848 PRKRIP1Q9H875 184 aaPredicted RBP30.63■■■□□ 2.49
PPFIA3-211ENST00000602848 CENPJQ9HC77 1338 aaPredicted RBP30.62■■■□□ 2.49
PPFIA3-211ENST00000602848 LMTK3Q96Q04 1460 aa30.6■■■□□ 2.49
PPFIA3-211ENST00000602848 UBR1Q8IWV7 1749 aa30.59■■■□□ 2.49
PPFIA3-211ENST00000602848 ALKQ9UM73 1620 aa30.58■■■□□ 2.49
PPFIA3-211ENST00000602848 TMEM132EQ6IEE7 984 aa30.58■■■□□ 2.49
PPFIA3-211ENST00000602848 ZNF142P52746 1687 aaPredicted RBP30.57■■■□□ 2.48
PPFIA3-211ENST00000602848 KTN1Q86UP2 1357 aaKnown RBP30.57■■■□□ 2.48
PPFIA3-211ENST00000602848 TRAK1Q9UPV9 953 aa30.56■■■□□ 2.48
PPFIA3-211ENST00000602848 TMEM2Q9UHN6 1383 aa30.55■■■□□ 2.48
PPFIA3-211ENST00000602848 CEP170BQ9Y4F5 1589 aaPredicted RBP30.54■■■□□ 2.48
PPFIA3-211ENST00000602848 YTHDC1Q96MU7 727 aaKnown RBP30.54■■■□□ 2.48
PPFIA3-211ENST00000602848 PUS7Q96PZ0 661 aaKnown RBP30.52■■■□□ 2.48
PPFIA3-211ENST00000602848 ASXL1Q8IXJ9 1541 aa30.52■■■□□ 2.48
PPFIA3-211ENST00000602848 ARHGEF28Q8N1W1 1705 aaKnown RBP30.5■■■□□ 2.47
PPFIA3-211ENST00000602848 QRICH2Q9H0J4 1663 aa30.5■■■□□ 2.47
PPFIA3-211ENST00000602848 YTHDC2Q9H6S0 1430 aaKnown RBP30.49■■■□□ 2.47
PPFIA3-211ENST00000602848 PER1O15534 1290 aaPredicted RBP30.47■■■□□ 2.47
PPFIA3-211ENST00000602848 RALBP1Q15311 655 aa30.46■■■□□ 2.47
PPFIA3-211ENST00000602848 PANK3Q9H999 370 aa30.45■■■□□ 2.47
PPFIA3-211ENST00000602848 SETD1AO15047 1707 aaKnown RBP30.43■■■□□ 2.46
PPFIA3-211ENST00000602848 SLIT1O75093 1534 aa30.43■■■□□ 2.46
PPFIA3-211ENST00000602848 DLC1Q96QB1 1528 aa30.43■■■□□ 2.46
PPFIA3-211ENST00000602848 THEMISQ8N1K5 641 aaPredicted RBP30.43■■■□□ 2.46
PPFIA3-211ENST00000602848 LRPPRCP42704 1394 aaKnown RBP30.43■■■□□ 2.46
PPFIA3-211ENST00000602848 ARHGAP23Q9P227 1491 aa30.43■■■□□ 2.46
PPFIA3-211ENST00000602848 HSPA2P54652 639 aa30.42■■■□□ 2.46
PPFIA3-211ENST00000602848 NRXN3Q9Y4C0 1643 aa30.42■■■□□ 2.46
PPFIA3-211ENST00000602848 EVC2Q86UK5 1308 aa30.4■■■□□ 2.46
PPFIA3-211ENST00000602848 ABCC11Q96J66 1382 aa30.4■■■□□ 2.46
PPFIA3-211ENST00000602848 PLEKHG1Q9ULL1 1385 aa30.4■■■□□ 2.46
PPFIA3-211ENST00000602848 EID1Q9Y6B2 187 aa30.4■■■□□ 2.46
PPFIA3-211ENST00000602848 MYOM1P52179 1685 aa30.39■■■□□ 2.46
PPFIA3-211ENST00000602848 STK26Q9P289 416 aa30.38■■■□□ 2.45
PPFIA3-211ENST00000602848 SIRT1Q96EB6 747 aa30.37■■■□□ 2.45
PPFIA3-211ENST00000602848 TXNDC2Q86VQ3 553 aa30.34■■■□□ 2.45
PPFIA3-211ENST00000602848 PARD3Q8TEW0 1356 aa30.34■■■□□ 2.45
PPFIA3-211ENST00000602848 POGKQ9P215 609 aa30.33■■■□□ 2.45
PPFIA3-211ENST00000602848 KNSTRNQ9Y448 316 aa30.33■■■□□ 2.45
PPFIA3-211ENST00000602848 NPC1L1Q9UHC9 1359 aa30.32■■■□□ 2.44
PPFIA3-211ENST00000602848 MYBBP1AQ9BQG0 1328 aaKnown RBP30.32■■■□□ 2.44
PPFIA3-211ENST00000602848 MRS2Q9HD23 443 aa30.32■■■□□ 2.44
PPFIA3-211ENST00000602848 STRCQ7RTU9 1775 aa30.31■■■□□ 2.44
PPFIA3-211ENST00000602848 PRAM1Q96QH2 718 aa30.31■■■□□ 2.44
PPFIA3-211ENST00000602848 LTKP29376 864 aa30.3■■■□□ 2.44
PPFIA3-211ENST00000602848 TECPR2O15040 1411 aa30.3■■■□□ 2.44
PPFIA3-211ENST00000602848 TULP4Q9NRJ4 1543 aa30.29■■■□□ 2.44
PPFIA3-211ENST00000602848 KNDC1Q76NI1 1749 aa30.29■■■□□ 2.44
PPFIA3-211ENST00000602848 ADAMTS13Q76LX8 1427 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms