RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 PADI6Q6TGC4 694 aa7.66□□□□□ -1.18
SGMS1-207ENST00000602619 EYA1Q99502 592 aa7.66□□□□□ -1.18
SGMS1-207ENST00000602619 ARIH1Q9Y4X5 557 aaPredicted RBP7.66□□□□□ -1.18
SGMS1-207ENST00000602619 PCDHB3Q9Y5E6 796 aa7.66□□□□□ -1.18
SGMS1-207ENST00000602619 PPEF1O14829 653 aaPredicted RBP7.65□□□□□ -1.18
SGMS1-207ENST00000602619 E2F4Q16254 413 aa7.65□□□□□ -1.18
SGMS1-207ENST00000602619 LCE2AQ5TA79 106 aaPredicted RBP7.65□□□□□ -1.18
SGMS1-207ENST00000602619 LIAT1Q6ZQX7 453 aa7.65□□□□□ -1.18
SGMS1-207ENST00000602619 TLL1O43897 1013 aa7.63□□□□□ -1.19
SGMS1-207ENST00000602619 GDF9O60383 454 aa7.63□□□□□ -1.19
SGMS1-207ENST00000602619 TREML4Q6UXN2 200 aa7.63□□□□□ -1.19
SGMS1-207ENST00000602619 ANKLE1Q8NAG6 615 aa7.63□□□□□ -1.19
SGMS1-207ENST00000602619 ZNF697Q5TEC3 545 aa7.62□□□□□ -1.19
SGMS1-207ENST00000602619 PRR14Q9BWN1 585 aa7.62□□□□□ -1.19
SGMS1-207ENST00000602619 FAM187AA6NFU0 413 aa7.61□□□□□ -1.19
SGMS1-207ENST00000602619 TNFRSF10AO00220 468 aa7.61□□□□□ -1.19
SGMS1-207ENST00000602619 S1PR4O95977 384 aa7.61□□□□□ -1.19
SGMS1-207ENST00000602619 SLC4A3P48751 1232 aa7.61□□□□□ -1.19
SGMS1-207ENST00000602619 ST8SIA5O15466 376 aa7.6□□□□□ -1.19
SGMS1-207ENST00000602619 AAASQ9NRG9 546 aa7.6□□□□□ -1.19
SGMS1-207ENST00000602619 BBXQ8WY36 941 aaPredicted RBP7.58□□□□□ -1.2
SGMS1-207ENST00000602619 PLA2G2CQ5R387 149 aa7.57□□□□□ -1.2
SGMS1-207ENST00000602619 ACTN4O43707 911 aaKnown RBP7.56□□□□□ -1.2
SGMS1-207ENST00000602619 WDR70Q9NW82 654 aa7.54□□□□□ -1.2
SGMS1-207ENST00000602619 PKD2L1Q9P0L9 805 aa7.54□□□□□ -1.2
SGMS1-207ENST00000602619 DACH1Q9UI36 760 aa7.54□□□□□ -1.2
SGMS1-207ENST00000602619 DNAJB2P25686 324 aa7.53□□□□□ -1.2
SGMS1-207ENST00000602619 TMEM134Q9H6X4 195 aa7.53□□□□□ -1.2
SGMS1-207ENST00000602619 ADH1BP00325 375 aa7.52□□□□□ -1.21
SGMS1-207ENST00000602619 KMT5BQ4FZB7 885 aa7.52□□□□□ -1.21
SGMS1-207ENST00000602619 SLC6A16Q9GZN6 736 aa7.52□□□□□ -1.21
SGMS1-207ENST00000602619 CFHP08603 1231 aa7.51□□□□□ -1.21
SGMS1-207ENST00000602619 FOXC1Q12948 553 aa7.51□□□□□ -1.21
SGMS1-207ENST00000602619 CRIPAKQ8N1N5 446 aa7.51□□□□□ -1.21
SGMS1-207ENST00000602619 SPRYD3Q8NCJ5 442 aa7.51□□□□□ -1.21
SGMS1-207ENST00000602619 WFS1O76024 890 aa7.5□□□□□ -1.21
SGMS1-207ENST00000602619 SLC10A3P09131 477 aa7.5□□□□□ -1.21
SGMS1-207ENST00000602619 PLCB2Q00722 1185 aa7.5□□□□□ -1.21
SGMS1-207ENST00000602619 SCUBE3Q8IX30 993 aa7.5□□□□□ -1.21
SGMS1-207ENST00000602619 RBM46Q8TBY0 533 aaKnown RBP7.5□□□□□ -1.21
SGMS1-207ENST00000602619 RCCD1A6NED2 376 aa7.49□□□□□ -1.21
SGMS1-207ENST00000602619 NR1I2O75469 434 aa7.49□□□□□ -1.21
SGMS1-207ENST00000602619 PTGDRQ13258 359 aa7.49□□□□□ -1.21
SGMS1-207ENST00000602619 GMPR2Q9P2T1 348 aaKnown RBP7.49□□□□□ -1.21
SGMS1-207ENST00000602619 ADGRG1Q9Y653 693 aa7.49□□□□□ -1.21
SGMS1-207ENST00000602619 AVPP01185 164 aa7.48□□□□□ -1.21
SGMS1-207ENST00000602619 FAM161AQ3B820 660 aa7.48□□□□□ -1.21
SGMS1-207ENST00000602619 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.48□□□□□ -1.21
SGMS1-207ENST00000602619 MLLT3P42568 568 aaPredicted RBP7.47□□□□□ -1.21
SGMS1-207ENST00000602619 NFX1Q12986 1120 aaKnown RBP7.47□□□□□ -1.21
SGMS1-207ENST00000602619 LMOD2Q6P5Q4 547 aa7.47□□□□□ -1.21
SGMS1-207ENST00000602619 TOR4AQ9NXH8 423 aa7.47□□□□□ -1.21
SGMS1-207ENST00000602619 C11orf95C9JLR9 678 aaPredicted RBP7.46□□□□□ -1.22
SGMS1-207ENST00000602619 AXIN1O15169 862 aa7.45□□□□□ -1.22
SGMS1-207ENST00000602619 PUS10Q3MIT2 529 aaKnown RBP7.45□□□□□ -1.22
SGMS1-207ENST00000602619 SPSB2Q99619 263 aa7.45□□□□□ -1.22
SGMS1-207ENST00000602619 STK17AQ9UEE5 414 aa7.45□□□□□ -1.22
SGMS1-207ENST00000602619 WIPF1O43516 503 aa7.44□□□□□ -1.22
SGMS1-207ENST00000602619 RPIAP49247 311 aa7.44□□□□□ -1.22
SGMS1-207ENST00000602619 CD2BP2O95400 341 aaKnown RBP7.42□□□□□ -1.22
SGMS1-207ENST00000602619 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
SGMS1-207ENST00000602619 CTC1Q2NKJ3 1217 aa7.42□□□□□ -1.22
SGMS1-207ENST00000602619 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
SGMS1-207ENST00000602619 CYP4X1Q8N118 509 aa7.42□□□□□ -1.22
SGMS1-207ENST00000602619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.4□□□□□ -1.22
SGMS1-207ENST00000602619 INSM1Q01101 510 aaPredicted RBP7.4□□□□□ -1.22
SGMS1-207ENST00000602619 PAXIP1Q6ZW49 1069 aaPredicted RBP7.4□□□□□ -1.22
SGMS1-207ENST00000602619 FCF1Q9Y324 198 aaKnown RBP7.4□□□□□ -1.22
SGMS1-207ENST00000602619 CFAP44Q96MT7 982 aa7.39□□□□□ -1.23
SGMS1-207ENST00000602619 SLC24A1O60721 1099 aa7.38□□□□□ -1.23
SGMS1-207ENST00000602619 FAM160A2Q8N612 972 aaPredicted RBP7.38□□□□□ -1.23
SGMS1-207ENST00000602619 THAP11Q96EK4 314 aa7.38□□□□□ -1.23
SGMS1-207ENST00000602619 NUTM2FA1L443 756 aa7.37□□□□□ -1.23
SGMS1-207ENST00000602619 SNRPBP14678 240 aaKnown RBP7.37□□□□□ -1.23
SGMS1-207ENST00000602619 PXYLP1Q8TE99 480 aa7.37□□□□□ -1.23
SGMS1-207ENST00000602619 ARHGEF1Q92888 912 aaKnown RBP7.37□□□□□ -1.23
SGMS1-207ENST00000602619 TTC24A2A3L6 582 aaPredicted RBP7.36□□□□□ -1.23
SGMS1-207ENST00000602619 TERTO14746 1132 aaKnown RBP7.36□□□□□ -1.23
SGMS1-207ENST00000602619 MORN1Q5T089 497 aa7.36□□□□□ -1.23
SGMS1-207ENST00000602619 OATP04181 439 aa7.35□□□□□ -1.23
SGMS1-207ENST00000602619 SMPD1P17405 629 aa7.35□□□□□ -1.23
SGMS1-207ENST00000602619 RSPH4AQ5TD94 716 aa7.35□□□□□ -1.23
SGMS1-207ENST00000602619 ATP13A2Q9NQ11 1180 aa7.35□□□□□ -1.23
SGMS1-207ENST00000602619 FUT2Q10981 343 aa7.33□□□□□ -1.24
SGMS1-207ENST00000602619 PRDM9Q9NQV7 894 aa7.33□□□□□ -1.24
SGMS1-207ENST00000602619 SLC27A5Q9Y2P5 690 aa7.33□□□□□ -1.24
SGMS1-207ENST00000602619 FCHSD2O94868 740 aa7.32□□□□□ -1.24
SGMS1-207ENST00000602619 FMNL1O95466 1100 aaPredicted RBP7.32□□□□□ -1.24
SGMS1-207ENST00000602619 METTL3Q86U44 580 aaKnown RBP7.32□□□□□ -1.24
SGMS1-207ENST00000602619 SNIP1Q8TAD8 396 aaKnown RBP7.32□□□□□ -1.24
SGMS1-207ENST00000602619 J3QL48 77 aa7.31□□□□□ -1.24
SGMS1-207ENST00000602619 WNT7AO00755 349 aa7.31□□□□□ -1.24
SGMS1-207ENST00000602619 ZBTB24O43167 697 aaPredicted RBP7.31□□□□□ -1.24
SGMS1-207ENST00000602619 ATP6V1AP38606 617 aa7.31□□□□□ -1.24
SGMS1-207ENST00000602619 KCNV2Q8TDN2 545 aa7.31□□□□□ -1.24
SGMS1-207ENST00000602619 TRIM47Q96LD4 638 aa7.31□□□□□ -1.24
SGMS1-207ENST00000602619 BRICD5Q6PL45 260 aa7.3□□□□□ -1.24
SGMS1-207ENST00000602619 TSHZ2Q9NRE2 1034 aa7.3□□□□□ -1.24
SGMS1-207ENST00000602619 SALL2Q9Y467 1007 aaPredicted RBP7.3□□□□□ -1.24
SGMS1-207ENST00000602619 RDH13Q8NBN7 331 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms