RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 EHBP1L1Q8N3D4 1523 aa23.37■■□□□ 1.33
TRIM11-205ENST00000602308 ARHGEF5Q12774 1597 aa23.35■■□□□ 1.33
TRIM11-205ENST00000602308 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
TRIM11-205ENST00000602308 EIF2AK4Q9P2K8 1649 aaKnown RBP23.35■■□□□ 1.33
TRIM11-205ENST00000602308 IDI1Q13907 227 aa23.35■■□□□ 1.33
TRIM11-205ENST00000602308 DIP2AQ14689 1571 aa23.34■■□□□ 1.33
TRIM11-205ENST00000602308 FOXD1Q16676 465 aa23.32■■□□□ 1.32
TRIM11-205ENST00000602308 BCANQ96GW7 911 aa23.31■■□□□ 1.32
TRIM11-205ENST00000602308 ATAD2Q6PL18 1390 aa23.3■■□□□ 1.32
TRIM11-205ENST00000602308 C8orf37Q96NL8 207 aa23.29■■□□□ 1.32
TRIM11-205ENST00000602308 NCOA3Q9Y6Q9 1424 aa23.28■■□□□ 1.32
TRIM11-205ENST00000602308 BRINP3Q76B58 766 aa23.27■■□□□ 1.32
TRIM11-205ENST00000602308 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
TRIM11-205ENST00000602308 CADPS2Q86UW7 1296 aa23.27■■□□□ 1.32
TRIM11-205ENST00000602308 MAST1Q9Y2H9 1570 aa23.27■■□□□ 1.32
TRIM11-205ENST00000602308 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
TRIM11-205ENST00000602308 ATF3P18847 181 aa23.24■■□□□ 1.31
TRIM11-205ENST00000602308 C19orf44Q9H6X5 657 aa23.24■■□□□ 1.31
TRIM11-205ENST00000602308 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.22■■□□□ 1.31
TRIM11-205ENST00000602308 NGLY1Q96IV0 654 aa23.22■■□□□ 1.31
TRIM11-205ENST00000602308 SETD5Q9C0A6 1442 aa23.22■■□□□ 1.31
TRIM11-205ENST00000602308 EP400Q96L91 3159 aa23.22■■□□□ 1.31
TRIM11-205ENST00000602308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.2■■□□□ 1.3
TRIM11-205ENST00000602308 DUOX2Q9NRD8 1548 aa23.18■■□□□ 1.3
TRIM11-205ENST00000602308 PLEKHG1Q9ULL1 1385 aa23.18■■□□□ 1.3
TRIM11-205ENST00000602308 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
TRIM11-205ENST00000602308 LRRC59Q96AG4 307 aaKnown RBP23.16■■□□□ 1.3
TRIM11-205ENST00000602308 TBX22Q9Y458 520 aa23.16■■□□□ 1.3
TRIM11-205ENST00000602308 ZFYVE9O95405 1425 aa23.15■■□□□ 1.3
TRIM11-205ENST00000602308 PNPLA6Q8IY17 1366 aa23.14■■□□□ 1.29
TRIM11-205ENST00000602308 CCDC125Q86Z20 511 aa23.13■■□□□ 1.29
TRIM11-205ENST00000602308 NOS1P29475 1434 aa23.13■■□□□ 1.29
TRIM11-205ENST00000602308 ASXL1Q8IXJ9 1541 aa23.13■■□□□ 1.29
TRIM11-205ENST00000602308 ADAMTS2O95450 1211 aa23.12■■□□□ 1.29
TRIM11-205ENST00000602308 DDX17Q92841 729 aaKnown RBP23.1■■□□□ 1.29
TRIM11-205ENST00000602308 SLC52A1Q9NWF4 448 aa23.1■■□□□ 1.29
TRIM11-205ENST00000602308 KIF15Q9NS87 1388 aa23.1■■□□□ 1.29
TRIM11-205ENST00000602308 PPP1R15AO75807 674 aaPredicted RBP23.09■■□□□ 1.29
TRIM11-205ENST00000602308 USP21Q9UK80 565 aa23.09■■□□□ 1.29
TRIM11-205ENST00000602308 ERBINQ96RT1 1412 aa23.08■■□□□ 1.29
TRIM11-205ENST00000602308 RIMS2Q9UQ26 1411 aa23.08■■□□□ 1.29
TRIM11-205ENST00000602308 TRPC5Q9UL62 973 aaPredicted RBP23.08■■□□□ 1.29
TRIM11-205ENST00000602308 KANK1Q14678 1352 aa23.08■■□□□ 1.29
TRIM11-205ENST00000602308 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.28
TRIM11-205ENST00000602308 RRP7BPQ9NSQ0 103 aa23.07■■□□□ 1.28
TRIM11-205ENST00000602308 LMTK2Q8IWU2 1503 aa23.07■■□□□ 1.28
TRIM11-205ENST00000602308 ADAMTS13Q76LX8 1427 aa23.07■■□□□ 1.28
TRIM11-205ENST00000602308 MST1RQ04912 1400 aa23.05■■□□□ 1.28
TRIM11-205ENST00000602308 DCCP43146 1447 aa23.03■■□□□ 1.28
TRIM11-205ENST00000602308 HDGFP51858 240 aaKnown RBP23.03■■□□□ 1.28
TRIM11-205ENST00000602308 LRP5O75197 1615 aa23.03■■□□□ 1.28
TRIM11-205ENST00000602308 ATRNO75882 1429 aa23.02■■□□□ 1.28
TRIM11-205ENST00000602308 FNBP4Q8N3X1 1017 aaPredicted RBP23.02■■□□□ 1.28
TRIM11-205ENST00000602308 AMOTL2Q9Y2J4 779 aa23.02■■□□□ 1.28
TRIM11-205ENST00000602308 PIK3R4Q99570 1358 aa23.01■■□□□ 1.27
TRIM11-205ENST00000602308 PTPRUQ92729 1446 aa23■■□□□ 1.27
TRIM11-205ENST00000602308 DEFB132Q7Z7B7 95 aa22.99■■□□□ 1.27
TRIM11-205ENST00000602308 MYO5BQ9ULV0 1848 aa22.98■■□□□ 1.27
TRIM11-205ENST00000602308 MYOM3Q5VTT5 1437 aa22.98■■□□□ 1.27
TRIM11-205ENST00000602308 BLMP54132 1417 aaPredicted RBP22.95■■□□□ 1.26
TRIM11-205ENST00000602308 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.95■■□□□ 1.26
TRIM11-205ENST00000602308 TMEM131LA2VDJ0 1609 aa22.93■■□□□ 1.26
TRIM11-205ENST00000602308 ABCC5O15440 1437 aa22.92■■□□□ 1.26
TRIM11-205ENST00000602308 GCC2Q8IWJ2 1684 aa22.92■■□□□ 1.26
TRIM11-205ENST00000602308 PTCH1Q13635 1447 aa22.91■■□□□ 1.26
TRIM11-205ENST00000602308 TRPM2O94759 1503 aa22.91■■□□□ 1.26
TRIM11-205ENST00000602308 BCL9LQ86UU0 1499 aa22.9■■□□□ 1.26
TRIM11-205ENST00000602308 PSDA5PKW4 1024 aaPredicted RBP22.88■■□□□ 1.25
TRIM11-205ENST00000602308 CHGAP10645 457 aaKnown RBP22.88■■□□□ 1.25
TRIM11-205ENST00000602308 HRCP23327 699 aa22.88■■□□□ 1.25
TRIM11-205ENST00000602308 GJD4Q96KN9 370 aaPredicted RBP22.88■■□□□ 1.25
TRIM11-205ENST00000602308 SOS2Q07890 1332 aaPredicted RBP22.86■■□□□ 1.25
TRIM11-205ENST00000602308 RPRD2Q5VT52 1461 aaKnown RBP22.85■■□□□ 1.25
TRIM11-205ENST00000602308 CROCC2H7BZ55 1655 aa22.84■■□□□ 1.25
TRIM11-205ENST00000602308 XRN1Q8IZH2 1706 aaKnown RBP22.82■■□□□ 1.24
TRIM11-205ENST00000602308 ADGRL3Q9HAR2 1447 aa22.82■■□□□ 1.24
TRIM11-205ENST00000602308 C1orf167Q5SNV9 1468 aa22.81■■□□□ 1.24
TRIM11-205ENST00000602308 SF3B2Q13435 895 aaKnown RBP22.81■■□□□ 1.24
TRIM11-205ENST00000602308 KANK4Q5T7N3 995 aaPredicted RBP22.81■■□□□ 1.24
TRIM11-205ENST00000602308 LAMC1P11047 1609 aa22.8■■□□□ 1.24
TRIM11-205ENST00000602308 YY1P25490 414 aa22.8■■□□□ 1.24
TRIM11-205ENST00000602308 CHIC2Q9UKJ5 165 aa22.8■■□□□ 1.24
TRIM11-205ENST00000602308 ORAI2Q96SN7 254 aa22.79■■□□□ 1.24
TRIM11-205ENST00000602308 DAPK1P53355 1430 aa22.79■■□□□ 1.24
TRIM11-205ENST00000602308 UNC13BO14795 1591 aa22.79■■□□□ 1.24
TRIM11-205ENST00000602308 MYOM2P54296 1465 aa22.78■■□□□ 1.24
TRIM11-205ENST00000602308 ANKRD30AQ9BXX3 1397 aa22.76■■□□□ 1.23
TRIM11-205ENST00000602308 COL22A1Q8NFW1 1626 aaPredicted RBP22.76■■□□□ 1.23
TRIM11-205ENST00000602308 RALGAPBQ86X10 1494 aa22.75■■□□□ 1.23
TRIM11-205ENST00000602308 GLI3P10071 1580 aa22.75■■□□□ 1.23
TRIM11-205ENST00000602308 METP08581 1390 aa22.75■■□□□ 1.23
TRIM11-205ENST00000602308 NRXN3Q9Y4C0 1643 aa22.73■■□□□ 1.23
TRIM11-205ENST00000602308 NALCNQ8IZF0 1738 aa22.73■■□□□ 1.23
TRIM11-205ENST00000602308 BRWD3Q6RI45 1802 aa22.71■■□□□ 1.23
TRIM11-205ENST00000602308 UNC5CLQ8IV45 518 aa22.71■■□□□ 1.23
TRIM11-205ENST00000602308 SEPT12Q8IYM1 358 aa22.7■■□□□ 1.22
TRIM11-205ENST00000602308 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
TRIM11-205ENST00000602308 SPHKAPQ2M3C7 1700 aa22.68■■□□□ 1.22
TRIM11-205ENST00000602308 BAG6P46379 1132 aa22.67■■□□□ 1.22
TRIM11-205ENST00000602308 MARF1Q9Y4F3 1742 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms