RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, humanhuman

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-211ENST00000601685 MAGI2Q86UL8 1455 aa21.6■■□□□ 1.05
CAPN12-211ENST00000601685 WDR7Q9Y4E6 1490 aa21.6■■□□□ 1.05
CAPN12-211ENST00000601685 IQGAP3Q86VI3 1631 aa21.6■■□□□ 1.05
CAPN12-211ENST00000601685 RNF17Q9BXT8 1623 aaKnown RBP21.59■■□□□ 1.05
CAPN12-211ENST00000601685 PLXNC1O60486 1568 aa21.58■■□□□ 1.05
CAPN12-211ENST00000601685 SLFN5Q08AF3 891 aa21.57■■□□□ 1.04
CAPN12-211ENST00000601685 KNSTRNQ9Y448 316 aa21.57■■□□□ 1.04
CAPN12-211ENST00000601685 ATP10AO60312 1499 aa21.56■■□□□ 1.04
CAPN12-211ENST00000601685 CHD1O14646 1710 aa21.56■■□□□ 1.04
CAPN12-211ENST00000601685 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.56■■□□□ 1.04
CAPN12-211ENST00000601685 AMER1Q5JTC6 1135 aaPredicted RBP21.55■■□□□ 1.04
CAPN12-211ENST00000601685 FRAT2O75474 233 aaPredicted RBP21.55■■□□□ 1.04
CAPN12-211ENST00000601685 RGS3P49796 1198 aa21.55■■□□□ 1.04
CAPN12-211ENST00000601685 TRMT2AQ8IZ69 625 aaKnown RBP21.55■■□□□ 1.04
CAPN12-211ENST00000601685 EIF3AQ14152 1382 aaKnown RBP21.55■■□□□ 1.04
CAPN12-211ENST00000601685 DUOX2Q9NRD8 1548 aa21.54■■□□□ 1.04
CAPN12-211ENST00000601685 PIK3C2GO75747 1445 aa21.52■■□□□ 1.04
CAPN12-211ENST00000601685 ABCC2Q92887 1545 aa21.51■■□□□ 1.03
CAPN12-211ENST00000601685 ERCC6L2Q5T890 1561 aa21.51■■□□□ 1.03
CAPN12-211ENST00000601685 SYNMO15061 1565 aa21.5■■□□□ 1.03
CAPN12-211ENST00000601685 SHROOM2Q13796 1616 aa21.5■■□□□ 1.03
CAPN12-211ENST00000601685 ASXL1Q8IXJ9 1541 aa21.49■■□□□ 1.03
CAPN12-211ENST00000601685 NKTRP30414 1462 aaKnown RBP21.49■■□□□ 1.03
CAPN12-211ENST00000601685 IQGAP1P46940 1657 aa21.49■■□□□ 1.03
CAPN12-211ENST00000601685 VIRMAQ69YN4 1812 aaKnown RBP21.47■■□□□ 1.03
CAPN12-211ENST00000601685 CDCA8Q53HL2 280 aa21.46■■□□□ 1.03
CAPN12-211ENST00000601685 PLCH2O75038 1416 aa21.46■■□□□ 1.03
CAPN12-211ENST00000601685 NPC1L1Q9UHC9 1359 aa21.46■■□□□ 1.03
CAPN12-211ENST00000601685 SPINK5Q9NQ38 1064 aaPredicted RBP21.46■■□□□ 1.03
CAPN12-211ENST00000601685 USP19O94966 1318 aa21.46■■□□□ 1.03
CAPN12-211ENST00000601685 MADDQ8WXG6 1647 aa21.45■■□□□ 1.02
CAPN12-211ENST00000601685 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
CAPN12-211ENST00000601685 CCDC146Q8IYE0 955 aa21.44■■□□□ 1.02
CAPN12-211ENST00000601685 BCAR3O75815 825 aa21.44■■□□□ 1.02
CAPN12-211ENST00000601685 IGHDP01880 384 aa21.43■■□□□ 1.02
CAPN12-211ENST00000601685 TRAPPC8Q9Y2L5 1435 aa21.43■■□□□ 1.02
CAPN12-211ENST00000601685 E9PSI1 815 aa21.43■■□□□ 1.02
CAPN12-211ENST00000601685 APAF1O14727 1248 aa21.42■■□□□ 1.02
CAPN12-211ENST00000601685 SCAF11Q99590 1463 aaKnown RBP21.41■■□□□ 1.02
CAPN12-211ENST00000601685 FAM43AQ8N2R8 423 aa21.41■■□□□ 1.02
CAPN12-211ENST00000601685 CGNL1Q0VF96 1302 aa21.4■■□□□ 1.02
CAPN12-211ENST00000601685 ABCC1P33527 1531 aa21.4■■□□□ 1.02
CAPN12-211ENST00000601685 MYOM1P52179 1685 aa21.4■■□□□ 1.02
CAPN12-211ENST00000601685 PDE3AQ14432 1141 aa21.39■■□□□ 1.01
CAPN12-211ENST00000601685 SCAPERQ9BY12 1400 aa21.38■■□□□ 1.01
CAPN12-211ENST00000601685 MAPK8IP3Q9UPT6 1336 aa21.38■■□□□ 1.01
CAPN12-211ENST00000601685 NGEFQ8N5V2 710 aa21.38■■□□□ 1.01
CAPN12-211ENST00000601685 ZCCHC11Q5TAX3 1644 aaKnown RBP21.38■■□□□ 1.01
CAPN12-211ENST00000601685 NINLQ9Y2I6 1382 aa21.37■■□□□ 1.01
CAPN12-211ENST00000601685 AFAP1Q8N556 730 aa21.37■■□□□ 1.01
CAPN12-211ENST00000601685 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
CAPN12-211ENST00000601685 BECN1Q14457 450 aa21.36■■□□□ 1.01
CAPN12-211ENST00000601685 SEC24BO95487 1268 aa21.36■■□□□ 1.01
CAPN12-211ENST00000601685 CLUAP1Q96AJ1 413 aa21.35■■□□□ 1.01
CAPN12-211ENST00000601685 SPHKAPQ2M3C7 1700 aa21.35■■□□□ 1.01
CAPN12-211ENST00000601685 STAC3Q96MF2 364 aa21.34■■□□□ 1.01
CAPN12-211ENST00000601685 DMRT2Q9Y5R5 561 aa21.34■■□□□ 1.01
CAPN12-211ENST00000601685 TRPM2O94759 1503 aa21.33■■□□□ 1.01
CAPN12-211ENST00000601685 NLRP1Q9C000 1473 aa21.33■■□□□ 1.01
CAPN12-211ENST00000601685 POGKQ9P215 609 aa21.33■■□□□ 1
CAPN12-211ENST00000601685 CENPJQ9HC77 1338 aaPredicted RBP21.32■■□□□ 1
CAPN12-211ENST00000601685 KDM5AP29375 1690 aaKnown RBP21.31■■□□□ 1
CAPN12-211ENST00000601685 RSPH6AQ9H0K4 717 aa21.31■■□□□ 1
CAPN12-211ENST00000601685 CEP152O94986 1710 aa21.3■■□□□ 1
CAPN12-211ENST00000601685 COG6Q9Y2V7 657 aa21.3■■□□□ 1
CAPN12-211ENST00000601685 CLTCL1P53675 1640 aa21.3■■□□□ 1
CAPN12-211ENST00000601685 PANK1Q8TE04 598 aa21.3■■□□□ 1
CAPN12-211ENST00000601685 PTPRTO14522 1441 aa21.29■■□□□ 1
CAPN12-211ENST00000601685 ZFYVE16Q7Z3T8 1539 aa21.29■■□□□ 1
CAPN12-211ENST00000601685 RTEL1-TNFRSF6BF6WH68 1400 aa21.28■■□□□ 1
CAPN12-211ENST00000601685 EIF5BO60841 1220 aaKnown RBP21.28■■□□□ 1
CAPN12-211ENST00000601685 CANXP27824 592 aaKnown RBP21.28■■□□□ 1
CAPN12-211ENST00000601685 ANTXR1Q9H6X2 564 aa21.28■■□□□ 1
CAPN12-211ENST00000601685 UHRF1BP1LA0JNW5 1464 aa21.27■■□□□ 1
CAPN12-211ENST00000601685 ZMYM3Q14202 1370 aa21.27■■□□□ 1
CAPN12-211ENST00000601685 WWC1Q8IX03 1113 aa21.27■□□□□ 0.99
CAPN12-211ENST00000601685 UBE2Q2Q8WVN8 375 aa21.27■□□□□ 0.99
CAPN12-211ENST00000601685 SLKQ9H2G2 1235 aaPredicted RBP21.27■□□□□ 0.99
CAPN12-211ENST00000601685 AAMPQ13685 434 aa21.25■□□□□ 0.99
CAPN12-211ENST00000601685 L1TD1Q5T7N2 865 aaKnown RBP21.25■□□□□ 0.99
CAPN12-211ENST00000601685 PMFBP1Q8TBY8 1022 aa21.25■□□□□ 0.99
CAPN12-211ENST00000601685 KIAA1210Q9ULL0 1709 aa21.25■□□□□ 0.99
CAPN12-211ENST00000601685 POLR3AO14802 1390 aaPredicted RBP21.24■□□□□ 0.99
CAPN12-211ENST00000601685 DEPDC5O75140 1603 aa21.24■□□□□ 0.99
CAPN12-211ENST00000601685 SLC24A1O60721 1099 aa21.23■□□□□ 0.99
CAPN12-211ENST00000601685 TBC1D32Q96NH3 1257 aa21.23■□□□□ 0.99
CAPN12-211ENST00000601685 CARD14Q9BXL6 1004 aa21.23■□□□□ 0.99
CAPN12-211ENST00000601685 ERVK-7P63135 1459 aa21.23■□□□□ 0.99
CAPN12-211ENST00000601685 UPF2Q9HAU5 1272 aaKnown RBP21.23■□□□□ 0.99
CAPN12-211ENST00000601685 TET3O43151 1660 aa21.22■□□□□ 0.99
CAPN12-211ENST00000601685 KIF3BO15066 747 aa21.22■□□□□ 0.99
CAPN12-211ENST00000601685 KANK1Q14678 1352 aa21.21■□□□□ 0.99
CAPN12-211ENST00000601685 RARSP54136 660 aaKnown RBP21.2■□□□□ 0.98
CAPN12-211ENST00000601685 CFAP70Q5T0N1 1121 aa21.2■□□□□ 0.98
CAPN12-211ENST00000601685 TBC1D2Q9BYX2 928 aa21.2■□□□□ 0.98
CAPN12-211ENST00000601685 PCDHB15Q9Y5E8 787 aa21.2■□□□□ 0.98
CAPN12-211ENST00000601685 ARAP3Q8WWN8 1544 aa21.2■□□□□ 0.98
CAPN12-211ENST00000601685 ATP7AQ04656 1500 aa21.19■□□□□ 0.98
CAPN12-211ENST00000601685 PDZRN3Q9UPQ7 1066 aa21.18■□□□□ 0.98
CAPN12-211ENST00000601685 RRAGDQ9NQL2 400 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms