RNA–Protein interactions for RNA: ENST00000601480.1

LINC00347-207, long intergenic non-protein coding RNA 347, humanhuman

TSL 2

Gene LINC00347, Length 1,094 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-207ENST00000601480 KCNC4Q03721 635 aa12.51□□□□□ -0.41
LINC00347-207ENST00000601480 TJAP1Q5JTD0 557 aa12.51□□□□□ -0.41
LINC00347-207ENST00000601480 NECTIN2Q92692 538 aa12.51□□□□□ -0.41
LINC00347-207ENST00000601480 SLC4A3P48751 1232 aa12.5□□□□□ -0.41
LINC00347-207ENST00000601480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00347-207ENST00000601480 MTRQ99707 1265 aa12.48□□□□□ -0.41
LINC00347-207ENST00000601480 PHOX2BQ99453 314 aa12.46□□□□□ -0.41
LINC00347-207ENST00000601480 SLC10A3P09131 477 aa12.45□□□□□ -0.42
LINC00347-207ENST00000601480 IL21Q9HBE4 155 aa12.44□□□□□ -0.42
LINC00347-207ENST00000601480 MAP2K5Q13163 448 aa12.42□□□□□ -0.42
LINC00347-207ENST00000601480 NLRP7Q8WX94 980 aa12.42□□□□□ -0.42
LINC00347-207ENST00000601480 ZNF516Q92618 1163 aa12.42□□□□□ -0.42
LINC00347-207ENST00000601480 LMOD2Q6P5Q4 547 aa12.41□□□□□ -0.42
LINC00347-207ENST00000601480 PRR14Q9BWN1 585 aa12.41□□□□□ -0.42
LINC00347-207ENST00000601480 DAXXQ9UER7 740 aaPredicted RBP12.4□□□□□ -0.42
LINC00347-207ENST00000601480 RGS20O76081 388 aa12.39□□□□□ -0.43
LINC00347-207ENST00000601480 CFHP08603 1231 aa12.39□□□□□ -0.43
LINC00347-207ENST00000601480 IRF6O14896 467 aa12.38□□□□□ -0.43
LINC00347-207ENST00000601480 ACTN4O43707 911 aaKnown RBP12.38□□□□□ -0.43
LINC00347-207ENST00000601480 COPS2P61201 443 aa12.38□□□□□ -0.43
LINC00347-207ENST00000601480 PCDHB3Q9Y5E6 796 aa12.37□□□□□ -0.43
LINC00347-207ENST00000601480 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
LINC00347-207ENST00000601480 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
LINC00347-207ENST00000601480 BLOC1S3Q6QNY0 202 aa12.35□□□□□ -0.43
LINC00347-207ENST00000601480 ZPR1O75312 459 aa12.34□□□□□ -0.43
LINC00347-207ENST00000601480 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
LINC00347-207ENST00000601480 CCDC102AQ96A19 550 aa12.32□□□□□ -0.44
LINC00347-207ENST00000601480 DDX11L8A8MPP1 907 aa12.31□□□□□ -0.44
LINC00347-207ENST00000601480 RSPH4AQ5TD94 716 aa12.31□□□□□ -0.44
LINC00347-207ENST00000601480 RDH13Q8NBN7 331 aa12.3□□□□□ -0.44
LINC00347-207ENST00000601480 PPP1R18Q6NYC8 613 aa12.29□□□□□ -0.44
LINC00347-207ENST00000601480 ZC3H15Q8WU90 426 aaKnown RBP12.29□□□□□ -0.44
LINC00347-207ENST00000601480 ZMYND10O75800 440 aa12.28□□□□□ -0.44
LINC00347-207ENST00000601480 SULF1Q8IWU6 871 aa12.28□□□□□ -0.44
LINC00347-207ENST00000601480 BARGINQ6ZT62 677 aa12.27□□□□□ -0.45
LINC00347-207ENST00000601480 GCGRP47871 477 aa12.26□□□□□ -0.45
LINC00347-207ENST00000601480 TLL1O43897 1013 aa12.25□□□□□ -0.45
LINC00347-207ENST00000601480 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.25□□□□□ -0.45
LINC00347-207ENST00000601480 MDM2Q00987 491 aaPredicted RBP12.24□□□□□ -0.45
LINC00347-207ENST00000601480 PUS10Q3MIT2 529 aaKnown RBP12.24□□□□□ -0.45
LINC00347-207ENST00000601480 NR1I2O75469 434 aa12.23□□□□□ -0.45
LINC00347-207ENST00000601480 FUT2Q10981 343 aa12.23□□□□□ -0.45
LINC00347-207ENST00000601480 CD46P15529 392 aa12.22□□□□□ -0.45
LINC00347-207ENST00000601480 SCUBE3Q8IX30 993 aa12.22□□□□□ -0.45
LINC00347-207ENST00000601480 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
LINC00347-207ENST00000601480 SLC24A1O60721 1099 aa12.2□□□□□ -0.46
LINC00347-207ENST00000601480 MORN1Q5T089 497 aa12.2□□□□□ -0.46
LINC00347-207ENST00000601480 KRI1Q8N9T8 703 aaKnown RBP12.2□□□□□ -0.46
LINC00347-207ENST00000601480 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
LINC00347-207ENST00000601480 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
LINC00347-207ENST00000601480 GGCXP38435 758 aa12.18□□□□□ -0.46
LINC00347-207ENST00000601480 ADH1BP00325 375 aa12.17□□□□□ -0.46
LINC00347-207ENST00000601480 CLCN1P35523 988 aa12.17□□□□□ -0.46
LINC00347-207ENST00000601480 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
LINC00347-207ENST00000601480 FAM217BQ9NTX9 383 aaPredicted RBP12.16□□□□□ -0.46
LINC00347-207ENST00000601480 RNF223E7ERA6 249 aa12.15□□□□□ -0.46
LINC00347-207ENST00000601480 THAP11Q96EK4 314 aa12.15□□□□□ -0.46
LINC00347-207ENST00000601480 PRKD2Q9BZL6 878 aa12.15□□□□□ -0.46
LINC00347-207ENST00000601480 SLC27A5Q9Y2P5 690 aa12.15□□□□□ -0.46
LINC00347-207ENST00000601480 S1PR4O95977 384 aa12.14□□□□□ -0.47
LINC00347-207ENST00000601480 AMHR2Q16671 573 aa12.13□□□□□ -0.47
LINC00347-207ENST00000601480 IRX2Q9BZI1 471 aaPredicted RBP12.13□□□□□ -0.47
LINC00347-207ENST00000601480 SPSB2Q99619 263 aa12.12□□□□□ -0.47
LINC00347-207ENST00000601480 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
LINC00347-207ENST00000601480 KDM4AO75164 1064 aa12.11□□□□□ -0.47
LINC00347-207ENST00000601480 SLC6A16Q9GZN6 736 aa12.11□□□□□ -0.47
LINC00347-207ENST00000601480 PPEF1O14829 653 aaPredicted RBP12.1□□□□□ -0.47
LINC00347-207ENST00000601480 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
LINC00347-207ENST00000601480 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
LINC00347-207ENST00000601480 SALL2Q9Y467 1007 aaPredicted RBP12.1□□□□□ -0.47
LINC00347-207ENST00000601480 BRICD5Q6PL45 260 aa12.09□□□□□ -0.47
LINC00347-207ENST00000601480 ANKLE1Q8NAG6 615 aa12.09□□□□□ -0.47
LINC00347-207ENST00000601480 FMNL1O95466 1100 aaPredicted RBP12.07□□□□□ -0.48
LINC00347-207ENST00000601480 RNF19BQ6ZMZ0 732 aa12.07□□□□□ -0.48
LINC00347-207ENST00000601480 FAM160A2Q8N612 972 aaPredicted RBP12.07□□□□□ -0.48
LINC00347-207ENST00000601480 TRIM66O15016 1216 aa12.06□□□□□ -0.48
LINC00347-207ENST00000601480 SSTR3P32745 418 aaPredicted RBP12.06□□□□□ -0.48
LINC00347-207ENST00000601480 USP46P62068 366 aa12.06□□□□□ -0.48
LINC00347-207ENST00000601480 TTLL12Q14166 644 aaPredicted RBP12.06□□□□□ -0.48
LINC00347-207ENST00000601480 HLA-CQ95604 372 aa12.06□□□□□ -0.48
LINC00347-207ENST00000601480 AK7Q96M32 723 aa12.06□□□□□ -0.48
LINC00347-207ENST00000601480 HOXA2O43364 376 aa12.05□□□□□ -0.48
LINC00347-207ENST00000601480 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
LINC00347-207ENST00000601480 BCANQ96GW7 911 aa12.04□□□□□ -0.48
LINC00347-207ENST00000601480 PLA2G2CQ5R387 149 aa12.03□□□□□ -0.48
LINC00347-207ENST00000601480 SLC19A1P41440 591 aa12.02□□□□□ -0.49
LINC00347-207ENST00000601480 PARP9Q8IXQ6 854 aa12.02□□□□□ -0.49
LINC00347-207ENST00000601480 Q3C1V9 767 aa12.01□□□□□ -0.49
LINC00347-207ENST00000601480 MSS51Q4VC12 460 aa12.01□□□□□ -0.49
LINC00347-207ENST00000601480 LIAT1Q6ZQX7 453 aa12.01□□□□□ -0.49
LINC00347-207ENST00000601480 PRDM9Q9NQV7 894 aa12.01□□□□□ -0.49
LINC00347-207ENST00000601480 GUCA2AQ02747 115 aa12□□□□□ -0.49
LINC00347-207ENST00000601480 NUTM1Q86Y26 1132 aa12□□□□□ -0.49
LINC00347-207ENST00000601480 SLC24A3Q9HC58 644 aa12□□□□□ -0.49
LINC00347-207ENST00000601480 SPRYD7Q5W111 196 aa11.98□□□□□ -0.49
LINC00347-207ENST00000601480 SPIRE2Q8WWL2 714 aa11.98□□□□□ -0.49
LINC00347-207ENST00000601480 GFRA3O60609 400 aa11.96□□□□□ -0.49
LINC00347-207ENST00000601480 MS4A1P11836 297 aa11.96□□□□□ -0.49
LINC00347-207ENST00000601480 USB1Q9BQ65 265 aaKnown RBP11.96□□□□□ -0.49
LINC00347-207ENST00000601480 FCF1Q9Y324 198 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms