RNA–Protein interactions for RNA: ENST00000601361.1

FARP1-234, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-234ENST00000601361 MYO5BQ9ULV0 1848 aa13.84□□□□□ -0.19
FARP1-234ENST00000601361 TXNDC2Q86VQ3 553 aa13.83□□□□□ -0.2
FARP1-234ENST00000601361 ROCK1Q13464 1354 aa13.83□□□□□ -0.2
FARP1-234ENST00000601361 UNC13BO14795 1591 aa13.82□□□□□ -0.2
FARP1-234ENST00000601361 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
FARP1-234ENST00000601361 NKTRP30414 1462 aaKnown RBP13.81□□□□□ -0.2
FARP1-234ENST00000601361 SHPRHQ149N8 1683 aa13.81□□□□□ -0.2
FARP1-234ENST00000601361 GCC2Q8IWJ2 1684 aa13.81□□□□□ -0.2
FARP1-234ENST00000601361 IDI1Q13907 227 aa13.8□□□□□ -0.2
FARP1-234ENST00000601361 RPRD2Q5VT52 1461 aaKnown RBP13.8□□□□□ -0.2
FARP1-234ENST00000601361 BCANQ96GW7 911 aa13.79□□□□□ -0.2
FARP1-234ENST00000601361 SLC52A1Q9NWF4 448 aa13.79□□□□□ -0.2
FARP1-234ENST00000601361 TMEM2Q9UHN6 1383 aa13.79□□□□□ -0.2
FARP1-234ENST00000601361 NOS1P29475 1434 aa13.79□□□□□ -0.2
FARP1-234ENST00000601361 ADGRB3O60242 1522 aa13.79□□□□□ -0.2
FARP1-234ENST00000601361 LRP6O75581 1613 aa13.78□□□□□ -0.2
FARP1-234ENST00000601361 NUP155O75694 1391 aa13.77□□□□□ -0.21
FARP1-234ENST00000601361 IQGAP3Q86VI3 1631 aa13.76□□□□□ -0.21
FARP1-234ENST00000601361 CHGAP10645 457 aaKnown RBP13.76□□□□□ -0.21
FARP1-234ENST00000601361 PPP1R15AO75807 674 aaPredicted RBP13.75□□□□□ -0.21
FARP1-234ENST00000601361 E9PCH4 1651 aa13.75□□□□□ -0.21
FARP1-234ENST00000601361 JCADQ9P266 1359 aa13.74□□□□□ -0.21
FARP1-234ENST00000601361 AHDC1Q5TGY3 1603 aaPredicted RBP13.74□□□□□ -0.21
FARP1-234ENST00000601361 RRBP1Q9P2E9 1410 aaKnown RBP13.73□□□□□ -0.21
FARP1-234ENST00000601361 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
FARP1-234ENST00000601361 KCNA6P17658 529 aa13.73□□□□□ -0.21
FARP1-234ENST00000601361 HDGFP51858 240 aaKnown RBP13.73□□□□□ -0.21
FARP1-234ENST00000601361 DIP2AQ14689 1571 aa13.72□□□□□ -0.21
FARP1-234ENST00000601361 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.21
FARP1-234ENST00000601361 SLC26A8Q96RN1 970 aa13.71□□□□□ -0.21
FARP1-234ENST00000601361 RBM33Q96EV2 1170 aaKnown RBP13.7□□□□□ -0.22
FARP1-234ENST00000601361 TMEM131LA2VDJ0 1609 aa13.7□□□□□ -0.22
FARP1-234ENST00000601361 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
FARP1-234ENST00000601361 CDK12Q9NYV4 1490 aaPredicted RBP13.69□□□□□ -0.22
FARP1-234ENST00000601361 MSH6P52701 1360 aa13.69□□□□□ -0.22
FARP1-234ENST00000601361 ADRA2BP18089 450 aa13.68□□□□□ -0.22
FARP1-234ENST00000601361 PROSER2Q86WR7 435 aaPredicted RBP13.68□□□□□ -0.22
FARP1-234ENST00000601361 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.68□□□□□ -0.22
FARP1-234ENST00000601361 TRIM52Q96A61 297 aa13.68□□□□□ -0.22
FARP1-234ENST00000601361 ZFYVE9O95405 1425 aa13.67□□□□□ -0.22
FARP1-234ENST00000601361 EP400Q96L91 3159 aa13.67□□□□□ -0.22
FARP1-234ENST00000601361 NHSL1Q5SYE7 1610 aa13.67□□□□□ -0.22
FARP1-234ENST00000601361 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
FARP1-234ENST00000601361 SPATA31A6Q5VVP1 1343 aa13.66□□□□□ -0.22
FARP1-234ENST00000601361 NAIPQ13075 1403 aa13.66□□□□□ -0.22
FARP1-234ENST00000601361 NUTM2DQ5VT03 806 aaPredicted RBP13.66□□□□□ -0.22
FARP1-234ENST00000601361 SLAIN2Q9P270 581 aa13.66□□□□□ -0.22
FARP1-234ENST00000601361 PLEKHG1Q9ULL1 1385 aa13.66□□□□□ -0.22
FARP1-234ENST00000601361 ZNF326Q5BKZ1 582 aaKnown RBP13.65□□□□□ -0.22
FARP1-234ENST00000601361 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
FARP1-234ENST00000601361 HFM1A2PYH4 1435 aa13.63□□□□□ -0.23
FARP1-234ENST00000601361 ZNF772Q68DY9 489 aaPredicted RBP13.62□□□□□ -0.23
FARP1-234ENST00000601361 C14orf37Q86TY3 774 aa13.6□□□□□ -0.23
FARP1-234ENST00000601361 XRN1Q8IZH2 1706 aaKnown RBP13.6□□□□□ -0.23
FARP1-234ENST00000601361 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
FARP1-234ENST00000601361 RGS12O14924 1447 aa13.59□□□□□ -0.23
FARP1-234ENST00000601361 TBX22Q9Y458 520 aa13.59□□□□□ -0.23
FARP1-234ENST00000601361 TRPM2O94759 1503 aa13.59□□□□□ -0.23
FARP1-234ENST00000601361 CLTCL1P53675 1640 aa13.58□□□□□ -0.24
FARP1-234ENST00000601361 KIF1BO60333 1816 aa13.58□□□□□ -0.24
FARP1-234ENST00000601361 PIAS4Q8N2W9 510 aaPredicted RBP13.58□□□□□ -0.24
FARP1-234ENST00000601361 ADAMTS13Q76LX8 1427 aa13.57□□□□□ -0.24
FARP1-234ENST00000601361 ASXL1Q8IXJ9 1541 aa13.57□□□□□ -0.24
FARP1-234ENST00000601361 LAMC1P11047 1609 aa13.57□□□□□ -0.24
FARP1-234ENST00000601361 NRXN3Q9Y4C0 1643 aa13.57□□□□□ -0.24
FARP1-234ENST00000601361 RXRBP28702 533 aa13.56□□□□□ -0.24
FARP1-234ENST00000601361 MEX3CQ5U5Q3 659 aaKnown RBP13.56□□□□□ -0.24
FARP1-234ENST00000601361 NALCNQ8IZF0 1738 aa13.55□□□□□ -0.24
FARP1-234ENST00000601361 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
FARP1-234ENST00000601361 DCCP43146 1447 aa13.55□□□□□ -0.24
FARP1-234ENST00000601361 SETD5Q9C0A6 1442 aa13.55□□□□□ -0.24
FARP1-234ENST00000601361 BRINP3Q76B58 766 aa13.52□□□□□ -0.25
FARP1-234ENST00000601361 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.25
FARP1-234ENST00000601361 AFF2P51816 1311 aa13.52□□□□□ -0.25
FARP1-234ENST00000601361 NEXMIFQ5QGS0 1516 aa13.52□□□□□ -0.25
FARP1-234ENST00000601361 SETBP1Q9Y6X0 1596 aa13.52□□□□□ -0.25
FARP1-234ENST00000601361 MARF1Q9Y4F3 1742 aaKnown RBP13.52□□□□□ -0.25
FARP1-234ENST00000601361 PTPRUQ92729 1446 aa13.51□□□□□ -0.25
FARP1-234ENST00000601361 ATF3P18847 181 aa13.51□□□□□ -0.25
FARP1-234ENST00000601361 CADPS2Q86UW7 1296 aa13.51□□□□□ -0.25
FARP1-234ENST00000601361 C19orf44Q9H6X5 657 aa13.51□□□□□ -0.25
FARP1-234ENST00000601361 MST1RQ04912 1400 aa13.5□□□□□ -0.25
FARP1-234ENST00000601361 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
FARP1-234ENST00000601361 CCDC144AA2RUR9 1427 aa13.48□□□□□ -0.25
FARP1-234ENST00000601361 ACIN1Q9UKV3 1341 aaKnown RBP13.48□□□□□ -0.25
FARP1-234ENST00000601361 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
FARP1-234ENST00000601361 PNPLA6Q8IY17 1366 aa13.47□□□□□ -0.25
FARP1-234ENST00000601361 COL22A1Q8NFW1 1626 aaPredicted RBP13.47□□□□□ -0.25
FARP1-234ENST00000601361 RPGRIP1LQ68CZ1 1315 aa13.47□□□□□ -0.25
FARP1-234ENST00000601361 METP08581 1390 aa13.46□□□□□ -0.25
FARP1-234ENST00000601361 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.25
FARP1-234ENST00000601361 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.25
FARP1-234ENST00000601361 NUTM2AQ8IVF1 878 aaPredicted RBP13.46□□□□□ -0.25
FARP1-234ENST00000601361 MSH5O43196 834 aa13.45□□□□□ -0.26
FARP1-234ENST00000601361 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
FARP1-234ENST00000601361 RGL3Q3MIN7 710 aa13.45□□□□□ -0.26
FARP1-234ENST00000601361 PPLO60437 1756 aa13.45□□□□□ -0.26
FARP1-234ENST00000601361 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.44□□□□□ -0.26
FARP1-234ENST00000601361 ATAD2Q6PL18 1390 aa13.44□□□□□ -0.26
FARP1-234ENST00000601361 BRWD3Q6RI45 1802 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms