RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 RBM33Q96EV2 1170 aaKnown RBP16.47■□□□□ 0.23
NOTCH3-206ENST00000601011 TESK2Q96S53 571 aa16.47■□□□□ 0.23
NOTCH3-206ENST00000601011 CENPJQ9HC77 1338 aaPredicted RBP16.47■□□□□ 0.23
NOTCH3-206ENST00000601011 TPRNQ4KMQ1 711 aa16.46■□□□□ 0.23
NOTCH3-206ENST00000601011 HMOX1P09601 288 aa16.46■□□□□ 0.23
NOTCH3-206ENST00000601011 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
NOTCH3-206ENST00000601011 WAPLQ7Z5K2 1190 aa16.45■□□□□ 0.22
NOTCH3-206ENST00000601011 PANK1Q8TE04 598 aa16.45■□□□□ 0.22
NOTCH3-206ENST00000601011 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
NOTCH3-206ENST00000601011 PRAM1Q96QH2 718 aa16.44■□□□□ 0.22
NOTCH3-206ENST00000601011 DNMT1P26358 1616 aaKnown RBP16.43■□□□□ 0.22
NOTCH3-206ENST00000601011 IDI1Q13907 227 aa16.43■□□□□ 0.22
NOTCH3-206ENST00000601011 DHX29Q7Z478 1369 aaKnown RBP16.43■□□□□ 0.22
NOTCH3-206ENST00000601011 ZNF428Q96B54 188 aa16.43■□□□□ 0.22
NOTCH3-206ENST00000601011 ADGRL1O94910 1474 aa16.41■□□□□ 0.22
NOTCH3-206ENST00000601011 FANCAO15360 1455 aa16.41■□□□□ 0.22
NOTCH3-206ENST00000601011 FAM135AQ9P2D6 1515 aa16.41■□□□□ 0.22
NOTCH3-206ENST00000601011 TXNDC2Q86VQ3 553 aa16.41■□□□□ 0.22
NOTCH3-206ENST00000601011 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
NOTCH3-206ENST00000601011 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
NOTCH3-206ENST00000601011 CEBPAP49715 358 aaPredicted RBP16.4■□□□□ 0.22
NOTCH3-206ENST00000601011 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
NOTCH3-206ENST00000601011 CD109Q6YHK3 1445 aa16.38■□□□□ 0.21
NOTCH3-206ENST00000601011 PER1O15534 1290 aaPredicted RBP16.38■□□□□ 0.21
NOTCH3-206ENST00000601011 SMC4Q9NTJ3 1288 aa16.38■□□□□ 0.21
NOTCH3-206ENST00000601011 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
NOTCH3-206ENST00000601011 VGFO15240 615 aaPredicted RBP16.38■□□□□ 0.21
NOTCH3-206ENST00000601011 HDGFL2Q7Z4V5 671 aaPredicted RBP16.37■□□□□ 0.21
NOTCH3-206ENST00000601011 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
NOTCH3-206ENST00000601011 SLKQ9H2G2 1235 aaPredicted RBP16.37■□□□□ 0.21
NOTCH3-206ENST00000601011 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
NOTCH3-206ENST00000601011 CABP1Q9NZU7 370 aa16.37■□□□□ 0.21
NOTCH3-206ENST00000601011 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
NOTCH3-206ENST00000601011 ASXL2Q76L83 1435 aa16.37■□□□□ 0.21
NOTCH3-206ENST00000601011 TCP11L2Q8N4U5 519 aa16.36■□□□□ 0.21
NOTCH3-206ENST00000601011 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
NOTCH3-206ENST00000601011 PLCH2O75038 1416 aa16.36■□□□□ 0.21
NOTCH3-206ENST00000601011 NCKAP5LQ9HCH0 1330 aa16.36■□□□□ 0.21
NOTCH3-206ENST00000601011 EIF3AQ14152 1382 aaKnown RBP16.36■□□□□ 0.21
NOTCH3-206ENST00000601011 THUMPD2Q9BTF0 503 aaKnown RBP16.36■□□□□ 0.21
NOTCH3-206ENST00000601011 CARD14Q9BXL6 1004 aa16.36■□□□□ 0.21
NOTCH3-206ENST00000601011 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
NOTCH3-206ENST00000601011 PRAG1Q86YV5 1406 aa16.35■□□□□ 0.21
NOTCH3-206ENST00000601011 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
NOTCH3-206ENST00000601011 SPATA31E1Q6ZUB1 1445 aa16.35■□□□□ 0.21
NOTCH3-206ENST00000601011 PRKCSHP14314 528 aaPredicted RBP16.35■□□□□ 0.21
NOTCH3-206ENST00000601011 UPF2Q9HAU5 1272 aaKnown RBP16.35■□□□□ 0.21
NOTCH3-206ENST00000601011 NOS1P29475 1434 aa16.34■□□□□ 0.21
NOTCH3-206ENST00000601011 PDE4AP27815 886 aa16.34■□□□□ 0.21
NOTCH3-206ENST00000601011 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
NOTCH3-206ENST00000601011 KDM5BQ9UGL1 1544 aa16.33■□□□□ 0.2
NOTCH3-206ENST00000601011 PMFBP1Q8TBY8 1022 aa16.33■□□□□ 0.2
NOTCH3-206ENST00000601011 TNNQ9UQP3 1299 aa16.33■□□□□ 0.2
NOTCH3-206ENST00000601011 A2MP01023 1474 aa16.33■□□□□ 0.2
NOTCH3-206ENST00000601011 IPO9Q96P70 1041 aaKnown RBP16.32■□□□□ 0.2
NOTCH3-206ENST00000601011 EVC2Q86UK5 1308 aa16.31■□□□□ 0.2
NOTCH3-206ENST00000601011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.3■□□□□ 0.2
NOTCH3-206ENST00000601011 UGGT1Q9NYU2 1555 aa16.3■□□□□ 0.2
NOTCH3-206ENST00000601011 AMER1Q5JTC6 1135 aaPredicted RBP16.3■□□□□ 0.2
NOTCH3-206ENST00000601011 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
NOTCH3-206ENST00000601011 TTC37Q6PGP7 1564 aa16.3■□□□□ 0.2
NOTCH3-206ENST00000601011 CGNL1Q0VF96 1302 aa16.3■□□□□ 0.2
NOTCH3-206ENST00000601011 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
NOTCH3-206ENST00000601011 NGDNQ8NEJ9 315 aaKnown RBP16.3■□□□□ 0.2
NOTCH3-206ENST00000601011 FANCIQ9NVI1 1328 aa16.29■□□□□ 0.2
NOTCH3-206ENST00000601011 RIPK4P57078 832 aa16.28■□□□□ 0.2
NOTCH3-206ENST00000601011 ZRANB1Q9UGI0 708 aa16.28■□□□□ 0.2
NOTCH3-206ENST00000601011 SLC4A10Q6U841 1118 aa16.28■□□□□ 0.2
NOTCH3-206ENST00000601011 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
NOTCH3-206ENST00000601011 PLA2R1Q13018 1463 aa16.28■□□□□ 0.2
NOTCH3-206ENST00000601011 ABCA8O94911 1581 aa16.27■□□□□ 0.19
NOTCH3-206ENST00000601011 SAMD9LQ8IVG5 1584 aa16.27■□□□□ 0.19
NOTCH3-206ENST00000601011 NSD3Q9BZ95 1437 aa16.27■□□□□ 0.19
NOTCH3-206ENST00000601011 CDK19Q9BWU1 502 aa16.27■□□□□ 0.19
NOTCH3-206ENST00000601011 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.19
NOTCH3-206ENST00000601011 RALGAPBQ86X10 1494 aa16.26■□□□□ 0.19
NOTCH3-206ENST00000601011 GCC2Q8IWJ2 1684 aa16.26■□□□□ 0.19
NOTCH3-206ENST00000601011 PDE3BQ13370 1112 aa16.26■□□□□ 0.19
NOTCH3-206ENST00000601011 TAOK2Q9UL54 1235 aa16.25■□□□□ 0.19
NOTCH3-206ENST00000601011 MFAP1P55081 439 aaKnown RBP16.25■□□□□ 0.19
NOTCH3-206ENST00000601011 SMG6Q86US8 1419 aaKnown RBP16.24■□□□□ 0.19
NOTCH3-206ENST00000601011 DCTN1Q14203 1278 aa16.24■□□□□ 0.19
NOTCH3-206ENST00000601011 BRPF3Q9ULD4 1205 aa16.24■□□□□ 0.19
NOTCH3-206ENST00000601011 CHD1O14646 1710 aa16.24■□□□□ 0.19
NOTCH3-206ENST00000601011 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
NOTCH3-206ENST00000601011 C1orf115Q9H7X2 142 aa16.24■□□□□ 0.19
NOTCH3-206ENST00000601011 ABCC2Q92887 1545 aa16.23■□□□□ 0.19
NOTCH3-206ENST00000601011 PLEKHH1Q9ULM0 1364 aa16.23■□□□□ 0.19
NOTCH3-206ENST00000601011 MYH16Q9H6N6 1097 aa16.22■□□□□ 0.19
NOTCH3-206ENST00000601011 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
NOTCH3-206ENST00000601011 EXOSC9Q06265 439 aaKnown RBP16.21■□□□□ 0.19
NOTCH3-206ENST00000601011 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.19
NOTCH3-206ENST00000601011 XPCQ01831 940 aaPredicted RBP16.21■□□□□ 0.19
NOTCH3-206ENST00000601011 ERICH6BQ5W0A0 696 aa16.21■□□□□ 0.19
NOTCH3-206ENST00000601011 WDR7Q9Y4E6 1490 aa16.21■□□□□ 0.18
NOTCH3-206ENST00000601011 WWC1Q8IX03 1113 aa16.2■□□□□ 0.18
NOTCH3-206ENST00000601011 E9PSI1 815 aa16.2■□□□□ 0.18
NOTCH3-206ENST00000601011 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-206ENST00000601011 BCORL1Q5H9F3 1711 aa16.2■□□□□ 0.18
NOTCH3-206ENST00000601011 PRKAR2BP31323 418 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms