RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CDCA8Q53HL2 280 aa26.77■■□□□ 1.88
SHKBP1-225ENST00000600733 MYT1LQ9UL68 1186 aa26.77■■□□□ 1.88
SHKBP1-225ENST00000600733 KANK1Q14678 1352 aa26.76■■□□□ 1.87
SHKBP1-225ENST00000600733 STAC3Q96MF2 364 aa26.76■■□□□ 1.87
SHKBP1-225ENST00000600733 IPO9Q96P70 1041 aaKnown RBP26.76■■□□□ 1.87
SHKBP1-225ENST00000600733 MYOM1P52179 1685 aa26.75■■□□□ 1.87
SHKBP1-225ENST00000600733 VWDEQ8N2E2 1590 aa26.75■■□□□ 1.87
SHKBP1-225ENST00000600733 ABCA9Q8IUA7 1624 aa26.75■■□□□ 1.87
SHKBP1-225ENST00000600733 WDR43Q15061 677 aaKnown RBP eCLIP26.74■■□□□ 1.87
SHKBP1-225ENST00000600733 CRBNQ96SW2 442 aa26.73■■□□□ 1.87
SHKBP1-225ENST00000600733 PLEKHH1Q9ULM0 1364 aa26.73■■□□□ 1.87
SHKBP1-225ENST00000600733 ASXL1Q8IXJ9 1541 aa26.73■■□□□ 1.87
SHKBP1-225ENST00000600733 UGGT1Q9NYU2 1555 aa26.73■■□□□ 1.87
SHKBP1-225ENST00000600733 TCERG1O14776 1098 aaKnown RBP26.72■■□□□ 1.87
SHKBP1-225ENST00000600733 EIF3AQ14152 1382 aaKnown RBP26.71■■□□□ 1.87
SHKBP1-225ENST00000600733 ADGRL1O94910 1474 aa26.7■■□□□ 1.86
SHKBP1-225ENST00000600733 CFAP70Q5T0N1 1121 aa26.69■■□□□ 1.86
SHKBP1-225ENST00000600733 MROH1Q8NDA8 1641 aa26.69■■□□□ 1.86
SHKBP1-225ENST00000600733 C20orf194Q5TEA3 1177 aa26.68■■□□□ 1.86
SHKBP1-225ENST00000600733 KIAA1210Q9ULL0 1709 aa26.68■■□□□ 1.86
SHKBP1-225ENST00000600733 KDM5AP29375 1690 aaKnown RBP26.67■■□□□ 1.86
SHKBP1-225ENST00000600733 ADGRF5Q8IZF2 1346 aa26.66■■□□□ 1.86
SHKBP1-225ENST00000600733 PDE4AP27815 886 aa26.66■■□□□ 1.86
SHKBP1-225ENST00000600733 NBR1Q14596 966 aa26.66■■□□□ 1.86
SHKBP1-225ENST00000600733 PIK3C2GO75747 1445 aa26.66■■□□□ 1.86
SHKBP1-225ENST00000600733 DUSP27Q5VZP5 1158 aa26.65■■□□□ 1.86
SHKBP1-225ENST00000600733 BCL11AQ9H165 835 aa26.65■■□□□ 1.86
SHKBP1-225ENST00000600733 ABCA6Q8N139 1617 aa26.65■■□□□ 1.86
SHKBP1-225ENST00000600733 MAP3K4Q9Y6R4 1608 aa26.65■■□□□ 1.86
SHKBP1-225ENST00000600733 ZNF521Q96K83 1311 aa26.65■■□□□ 1.86
SHKBP1-225ENST00000600733 NPM2Q86SE8 214 aaKnown RBP26.64■■□□□ 1.86
SHKBP1-225ENST00000600733 ZBTB47Q9UFB7 747 aaPredicted RBP26.64■■□□□ 1.86
SHKBP1-225ENST00000600733 SKAP1Q86WV1 359 aa26.64■■□□□ 1.85
SHKBP1-225ENST00000600733 NPC1L1Q9UHC9 1359 aa26.62■■□□□ 1.85
SHKBP1-225ENST00000600733 NEURL4Q96JN8 1562 aa26.62■■□□□ 1.85
SHKBP1-225ENST00000600733 MYOM2P54296 1465 aa26.61■■□□□ 1.85
SHKBP1-225ENST00000600733 ERVK-7P63135 1459 aa26.61■■□□□ 1.85
SHKBP1-225ENST00000600733 GOLGA2Q08379 1002 aa26.61■■□□□ 1.85
SHKBP1-225ENST00000600733 CCDC146Q8IYE0 955 aa26.61■■□□□ 1.85
SHKBP1-225ENST00000600733 BACH2Q9BYV9 841 aa26.61■■□□□ 1.85
SHKBP1-225ENST00000600733 KIF1BO60333 1816 aa26.61■■□□□ 1.85
SHKBP1-225ENST00000600733 MS4A1P11836 297 aa26.6■■□□□ 1.85
SHKBP1-225ENST00000600733 EFCAB6Q5THR3 1501 aa26.6■■□□□ 1.85
SHKBP1-225ENST00000600733 MROH2AA6NES4 1674 aa26.58■■□□□ 1.85
SHKBP1-225ENST00000600733 PPRC1Q5VV67 1664 aaKnown RBP26.57■■□□□ 1.84
SHKBP1-225ENST00000600733 ASXL2Q76L83 1435 aa26.57■■□□□ 1.84
SHKBP1-225ENST00000600733 KIDINS220Q9ULH0 1771 aa26.57■■□□□ 1.84
SHKBP1-225ENST00000600733 IFT172Q9UG01 1749 aa26.57■■□□□ 1.84
SHKBP1-225ENST00000600733 CARD14Q9BXL6 1004 aa26.56■■□□□ 1.84
SHKBP1-225ENST00000600733 SLFN5Q08AF3 891 aa26.54■■□□□ 1.84
SHKBP1-225ENST00000600733 APAF1O14727 1248 aa26.53■■□□□ 1.84
SHKBP1-225ENST00000600733 DEKP35659 375 aaKnown RBP26.51■■□□□ 1.84
SHKBP1-225ENST00000600733 SPINK5Q9NQ38 1064 aaPredicted RBP26.51■■□□□ 1.84
SHKBP1-225ENST00000600733 KDM2BQ8NHM5 1336 aa26.5■■□□□ 1.83
SHKBP1-225ENST00000600733 SLC24A1O60721 1099 aa26.5■■□□□ 1.83
SHKBP1-225ENST00000600733 NOS1P29475 1434 aa26.5■■□□□ 1.83
SHKBP1-225ENST00000600733 NRXN1Q9ULB1 1477 aa26.49■■□□□ 1.83
SHKBP1-225ENST00000600733 CHGAP10645 457 aaKnown RBP26.49■■□□□ 1.83
SHKBP1-225ENST00000600733 TRMT2AQ8IZ69 625 aaKnown RBP26.48■■□□□ 1.83
SHKBP1-225ENST00000600733 CFAP65Q6ZU64 1925 aaKnown RBP26.48■■□□□ 1.83
SHKBP1-225ENST00000600733 MYO3AQ8NEV4 1616 aa26.47■■□□□ 1.83
SHKBP1-225ENST00000600733 ZNF518AQ6AHZ1 1483 aa26.47■■□□□ 1.83
SHKBP1-225ENST00000600733 LMTK2Q8IWU2 1503 aa26.46■■□□□ 1.83
SHKBP1-225ENST00000600733 ADGRB3O60242 1522 aa26.46■■□□□ 1.83
SHKBP1-225ENST00000600733 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.45■■□□□ 1.83
SHKBP1-225ENST00000600733 CENPJQ9HC77 1338 aaPredicted RBP26.44■■□□□ 1.82
SHKBP1-225ENST00000600733 SBNO2Q9Y2G9 1366 aa26.44■■□□□ 1.82
SHKBP1-225ENST00000600733 CENPQQ7L2Z9 268 aaPredicted RBP26.43■■□□□ 1.82
SHKBP1-225ENST00000600733 TRAK1Q9UPV9 953 aa26.43■■□□□ 1.82
SHKBP1-225ENST00000600733 DMRT2Q9Y5R5 561 aa26.43■■□□□ 1.82
SHKBP1-225ENST00000600733 NKTRP30414 1462 aaKnown RBP26.43■■□□□ 1.82
SHKBP1-225ENST00000600733 NPATQ14207 1427 aa26.41■■□□□ 1.82
SHKBP1-225ENST00000600733 GGT6Q6P531 493 aa26.4■■□□□ 1.82
SHKBP1-225ENST00000600733 BCAR3O75815 825 aa26.4■■□□□ 1.82
SHKBP1-225ENST00000600733 SETBP1Q9Y6X0 1596 aa26.4■■□□□ 1.82
SHKBP1-225ENST00000600733 E9PSI1 815 aa26.39■■□□□ 1.81
SHKBP1-225ENST00000600733 NSD3Q9BZ95 1437 aa26.38■■□□□ 1.81
SHKBP1-225ENST00000600733 TMEM132EQ6IEE7 984 aa26.37■■□□□ 1.81
SHKBP1-225ENST00000600733 FRMPD1Q5SYB0 1578 aa26.37■■□□□ 1.81
SHKBP1-225ENST00000600733 PPLO60437 1756 aa26.37■■□□□ 1.81
SHKBP1-225ENST00000600733 RTL5Q5HYW3 569 aaPredicted RBP26.37■■□□□ 1.81
SHKBP1-225ENST00000600733 SLC12A5Q9H2X9 1139 aa26.37■■□□□ 1.81
SHKBP1-225ENST00000600733 TNNT2P45379 298 aaPredicted RBP26.36■■□□□ 1.81
SHKBP1-225ENST00000600733 POLR3AO14802 1390 aaPredicted RBP26.36■■□□□ 1.81
SHKBP1-225ENST00000600733 C14orf93Q9H972 538 aaKnown RBP26.36■■□□□ 1.81
SHKBP1-225ENST00000600733 QRICH2Q9H0J4 1663 aa26.36■■□□□ 1.81
SHKBP1-225ENST00000600733 POGZQ7Z3K3 1410 aa26.35■■□□□ 1.81
SHKBP1-225ENST00000600733 ZC3H13Q5T200 1668 aaKnown RBP26.35■■□□□ 1.81
SHKBP1-225ENST00000600733 LAS1LQ9Y4W2 734 aaKnown RBP26.34■■□□□ 1.81
SHKBP1-225ENST00000600733 ADGRB1O14514 1584 aa26.34■■□□□ 1.81
SHKBP1-225ENST00000600733 MORC1Q86VD1 984 aa26.34■■□□□ 1.81
SHKBP1-225ENST00000600733 CD109Q6YHK3 1445 aa26.33■■□□□ 1.8
SHKBP1-225ENST00000600733 NPM1P06748 294 aaKnown RBP eCLIP26.32■■□□□ 1.8
SHKBP1-225ENST00000600733 WWC1Q8IX03 1113 aa26.31■■□□□ 1.8
SHKBP1-225ENST00000600733 SHPRHQ149N8 1683 aa26.31■■□□□ 1.8
SHKBP1-225ENST00000600733 NGEFQ8N5V2 710 aa26.3■■□□□ 1.8
SHKBP1-225ENST00000600733 MLH3Q9UHC1 1453 aa26.3■■□□□ 1.8
SHKBP1-225ENST00000600733 HECW2Q9P2P5 1572 aa26.29■■□□□ 1.8
SHKBP1-225ENST00000600733 NEUROD2Q15784 382 aa26.28■■□□□ 1.8
SHKBP1-225ENST00000600733 NUTM2DQ5VT03 806 aaPredicted RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms