RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 SENP3-EIF4A1A0A087X0R7 540 aa16.06■□□□□ 0.16
MIA-RAB4B-201ENST00000600729 PIK3C2BO00750 1634 aa16.04■□□□□ 0.16
MIA-RAB4B-201ENST00000600729 AHDC1Q5TGY3 1603 aaPredicted RBP16.02■□□□□ 0.16
MIA-RAB4B-201ENST00000600729 ARHGAP23Q9P227 1491 aa16.02■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 KIF15Q9NS87 1388 aa16.01■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 SCAF11Q99590 1463 aaKnown RBP16.01■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 DAPK1P53355 1430 aa16.01■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 DIP2AQ14689 1571 aa16■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 SLIT1O75093 1534 aa16■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 CCDC125Q86Z20 511 aa16■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 QTRT2Q9H974 415 aaKnown RBP16■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 ERBINQ96RT1 1412 aa16■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 ARHGAP31Q2M1Z3 1444 aa15.99■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 SLAIN2Q9P270 581 aa15.98■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 KDM5AP29375 1690 aaKnown RBP15.98■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 LTKP29376 864 aa15.97■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 RRP7BPQ9NSQ0 103 aa15.96■□□□□ 0.15
MIA-RAB4B-201ENST00000600729 LMTK2Q8IWU2 1503 aa15.95■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 NGLY1Q96IV0 654 aa15.95■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 BCL9LQ86UU0 1499 aa15.95■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 MYO5BQ9ULV0 1848 aa15.94■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 MSH6P52701 1360 aa15.94■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 EFCAB6Q5THR3 1501 aa15.93■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 HRCP23327 699 aa15.92■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 NKTRP30414 1462 aaKnown RBP15.91■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 TET3O43151 1660 aa15.9■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 PROSER2Q86WR7 435 aaPredicted RBP15.9■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 C8orf37Q96NL8 207 aa15.9■□□□□ 0.14
MIA-RAB4B-201ENST00000600729 NOS1P29475 1434 aa15.89■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.89■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 CHIC2Q9UKJ5 165 aa15.89■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 ADGRB3O60242 1522 aa15.89■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 TMEM2Q9UHN6 1383 aa15.88■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 PSDA5PKW4 1024 aaPredicted RBP15.88■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 BLMP54132 1417 aaPredicted RBP15.87■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 GCC2Q8IWJ2 1684 aa15.87■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 TXNDC2Q86VQ3 553 aa15.87■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 DEFB132Q7Z7B7 95 aa15.86■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 ANKRD30AQ9BXX3 1397 aa15.86■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 KCNA6P17658 529 aa15.85■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 IDI1Q13907 227 aa15.85■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 UNC13BO14795 1591 aa15.83■□□□□ 0.13
MIA-RAB4B-201ENST00000600729 UTRNP46939 3433 aa15.83■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 C1QTNF8P60827 252 aa15.82■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 KANK1Q14678 1352 aa15.82■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 TMEM131LA2VDJ0 1609 aa15.82■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 E9PCH4 1651 aa15.82■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 CHD2O14647 1828 aaKnown RBP15.81■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 ZFYVE9O95405 1425 aa15.8■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 ZNF784Q8NCA9 323 aaPredicted RBP15.79■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 BRWD3Q6RI45 1802 aa15.79■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 ANKRD50Q9ULJ7 1429 aa15.78■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.78■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 APLP2Q06481 763 aa15.78■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 SLC26A8Q96RN1 970 aa15.78■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 EID1Q9Y6B2 187 aa15.77■□□□□ 0.12
MIA-RAB4B-201ENST00000600729 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 ATRNO75882 1429 aa15.77■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 TRPC5Q9UL62 973 aaPredicted RBP15.76■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 IQGAP3Q86VI3 1631 aa15.76■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 FAM50AQ14320 339 aaKnown RBP15.75■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 SPHKAPQ2M3C7 1700 aa15.74■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 CAMTA1Q9Y6Y1 1673 aa15.73■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 RIMS2Q9UQ26 1411 aa15.72■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 USP21Q9UK80 565 aa15.72■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 CHD4Q14839 1912 aa15.72■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 SF3B2Q13435 895 aaKnown RBP15.71■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 PNPLA6Q8IY17 1366 aa15.71■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 PLEKHG1Q9ULL1 1385 aa15.71■□□□□ 0.11
MIA-RAB4B-201ENST00000600729 ADAMTS13Q76LX8 1427 aa15.7■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 SLC52A1Q9NWF4 448 aa15.7■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 ASXL1Q8IXJ9 1541 aa15.69■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 NRXN3Q9Y4C0 1643 aa15.69■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 ADAMTS2O95450 1211 aa15.69■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 SLC34A2O95436 690 aa15.68■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 BRINP3Q76B58 766 aa15.68■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 ROCK1Q13464 1354 aa15.65■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 R3HDM1Q15032 1099 aaKnown RBP15.65■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 PTPRUQ92729 1446 aa15.65■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 NCOA3Q9Y6Q9 1424 aa15.65■□□□□ 0.1
MIA-RAB4B-201ENST00000600729 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 XRN1Q8IZH2 1706 aaKnown RBP15.63■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 FNBP4Q8N3X1 1017 aaPredicted RBP15.63■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 LRRC59Q96AG4 307 aaKnown RBP15.63■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 MARF1Q9Y4F3 1742 aaKnown RBP15.63■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.62■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 ATF3P18847 181 aa15.6■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 C14orf37Q86TY3 774 aa15.6■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 PPARGC1BQ86YN6 1023 aaKnown RBP15.6■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 BCANQ96GW7 911 aa15.6■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 GLI3P10071 1580 aa15.6■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 CLTCL1P53675 1640 aa15.6■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 TRPM2O94759 1503 aa15.59■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 CHGAP10645 457 aaKnown RBP15.59■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 TBX22Q9Y458 520 aa15.59■□□□□ 0.09
MIA-RAB4B-201ENST00000600729 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms