RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 RBM25P49756 843 aaKnown RBP12.24□□□□□ -0.45
NFKB1-212ENST00000600343 PSEN1P49768 467 aa12.23□□□□□ -0.45
NFKB1-212ENST00000600343 GABPB1Q06547 395 aaPredicted RBP12.23□□□□□ -0.45
NFKB1-212ENST00000600343 HFM1A2PYH4 1435 aa12.23□□□□□ -0.45
NFKB1-212ENST00000600343 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
NFKB1-212ENST00000600343 NBPF8Q3BBV2 869 aa12.23□□□□□ -0.45
NFKB1-212ENST00000600343 KIF15Q9NS87 1388 aa12.23□□□□□ -0.45
NFKB1-212ENST00000600343 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
NFKB1-212ENST00000600343 PRXQ9BXM0 1461 aa12.23□□□□□ -0.45
NFKB1-212ENST00000600343 GOLGA6L22H0YM25 854 aa12.22□□□□□ -0.45
NFKB1-212ENST00000600343 TSPYL1Q9H0U9 437 aa12.22□□□□□ -0.45
NFKB1-212ENST00000600343 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
NFKB1-212ENST00000600343 BCL2L12Q9HB09 334 aa12.22□□□□□ -0.45
NFKB1-212ENST00000600343 IGHDP01880 384 aa12.22□□□□□ -0.45
NFKB1-212ENST00000600343 CAPN2P17655 700 aa12.22□□□□□ -0.45
NFKB1-212ENST00000600343 YY1AP1Q9H869 796 aa12.22□□□□□ -0.45
NFKB1-212ENST00000600343 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
NFKB1-212ENST00000600343 RALBP1Q15311 655 aa12.21□□□□□ -0.45
NFKB1-212ENST00000600343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
NFKB1-212ENST00000600343 NINLQ9Y2I6 1382 aa12.21□□□□□ -0.45
NFKB1-212ENST00000600343 AXDND1Q5T1B0 1012 aaPredicted RBP12.21□□□□□ -0.45
NFKB1-212ENST00000600343 FEZ1Q99689 392 aa12.21□□□□□ -0.45
NFKB1-212ENST00000600343 GEMIN8Q9NWZ8 242 aaKnown RBP12.21□□□□□ -0.45
NFKB1-212ENST00000600343 FMN1Q68DA7 1419 aa12.21□□□□□ -0.45
NFKB1-212ENST00000600343 HOMEZQ8IX15 550 aa12.21□□□□□ -0.46
NFKB1-212ENST00000600343 OGFRQ9NZT2 677 aa12.21□□□□□ -0.46
NFKB1-212ENST00000600343 PTMAP06454 111 aaKnown RBP12.2□□□□□ -0.46
NFKB1-212ENST00000600343 FAM193AP78312 1265 aa12.2□□□□□ -0.46
NFKB1-212ENST00000600343 CALCOCO1Q9P1Z2 691 aa12.2□□□□□ -0.46
NFKB1-212ENST00000600343 TULP2O00295 520 aa12.2□□□□□ -0.46
NFKB1-212ENST00000600343 ZNF622Q969S3 477 aaKnown RBP eCLIP12.2□□□□□ -0.46
NFKB1-212ENST00000600343 KLHL40Q2TBA0 621 aa12.2□□□□□ -0.46
NFKB1-212ENST00000600343 C22orf23Q9BZE7 217 aa12.2□□□□□ -0.46
NFKB1-212ENST00000600343 HSP90AB1P08238 724 aaKnown RBP12.19□□□□□ -0.46
NFKB1-212ENST00000600343 RAB3GAP1Q15042 981 aa12.19□□□□□ -0.46
NFKB1-212ENST00000600343 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
NFKB1-212ENST00000600343 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
NFKB1-212ENST00000600343 ZNF445P59923 1031 aa12.19□□□□□ -0.46
NFKB1-212ENST00000600343 EIF3AQ14152 1382 aaKnown RBP12.18□□□□□ -0.46
NFKB1-212ENST00000600343 PATL2C9JE40 543 aaKnown RBP12.18□□□□□ -0.46
NFKB1-212ENST00000600343 TNNT3P45378 269 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-212ENST00000600343 SLFN14P0C7P3 912 aa12.18□□□□□ -0.46
NFKB1-212ENST00000600343 MIA2Q96PC5 1412 aa12.18□□□□□ -0.46
NFKB1-212ENST00000600343 DDIT3P35638 169 aa12.18□□□□□ -0.46
NFKB1-212ENST00000600343 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-212ENST00000600343 NLRP13Q86W25 1043 aa12.17□□□□□ -0.46
NFKB1-212ENST00000600343 SCAPERQ9BY12 1400 aa12.17□□□□□ -0.46
NFKB1-212ENST00000600343 MFAP1P55081 439 aaKnown RBP12.16□□□□□ -0.46
NFKB1-212ENST00000600343 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
NFKB1-212ENST00000600343 NAIPQ13075 1403 aa12.16□□□□□ -0.46
NFKB1-212ENST00000600343 TRERF1Q96PN7 1200 aa12.16□□□□□ -0.46
NFKB1-212ENST00000600343 NCOA3Q9Y6Q9 1424 aa12.16□□□□□ -0.46
NFKB1-212ENST00000600343 ERICH4A6NGS2 130 aa12.15□□□□□ -0.46
NFKB1-212ENST00000600343 CAVIN1Q6NZI2 390 aaKnown RBP12.15□□□□□ -0.46
NFKB1-212ENST00000600343 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
NFKB1-212ENST00000600343 EFCC1Q9HA90 598 aa12.15□□□□□ -0.46
NFKB1-212ENST00000600343 LOC102724159A0A0B4J2E5 919 aa12.15□□□□□ -0.46
NFKB1-212ENST00000600343 PWP2Q15269 919 aaKnown RBP12.15□□□□□ -0.46
NFKB1-212ENST00000600343 ZSCAN23Q3MJ62 389 aa12.15□□□□□ -0.46
NFKB1-212ENST00000600343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.15□□□□□ -0.46
NFKB1-212ENST00000600343 HSP90B1P14625 803 aaKnown RBP12.15□□□□□ -0.46
NFKB1-212ENST00000600343 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
NFKB1-212ENST00000600343 SMC5Q8IY18 1101 aa12.14□□□□□ -0.47
NFKB1-212ENST00000600343 ANKRD7Q92527 254 aa12.14□□□□□ -0.47
NFKB1-212ENST00000600343 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
NFKB1-212ENST00000600343 PRIM1P49642 420 aaKnown RBP12.14□□□□□ -0.47
NFKB1-212ENST00000600343 PTPRKQ15262 1439 aa12.13□□□□□ -0.47
NFKB1-212ENST00000600343 NOLC1Q14978 699 aaKnown RBP eCLIP12.13□□□□□ -0.47
NFKB1-212ENST00000600343 TERF2Q15554 542 aa12.13□□□□□ -0.47
NFKB1-212ENST00000600343 FEZ2Q9UHY8 353 aaPredicted RBP12.13□□□□□ -0.47
NFKB1-212ENST00000600343 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
NFKB1-212ENST00000600343 MLECQ14165 292 aa12.12□□□□□ -0.47
NFKB1-212ENST00000600343 PIBF1Q8WXW3 757 aa12.12□□□□□ -0.47
NFKB1-212ENST00000600343 USP47Q96K76 1375 aa12.12□□□□□ -0.47
NFKB1-212ENST00000600343 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
NFKB1-212ENST00000600343 RTEL1-TNFRSF6BF6WH68 1400 aa12.11□□□□□ -0.47
NFKB1-212ENST00000600343 TULP1O00294 542 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-212ENST00000600343 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-212ENST00000600343 DUSP27Q5VZP5 1158 aa12.11□□□□□ -0.47
NFKB1-212ENST00000600343 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
NFKB1-212ENST00000600343 FGD6Q6ZV73 1430 aa12.11□□□□□ -0.47
NFKB1-212ENST00000600343 SSFA2P28290 1259 aa12.11□□□□□ -0.47
NFKB1-212ENST00000600343 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
NFKB1-212ENST00000600343 CCDC144AA2RUR9 1427 aa12.11□□□□□ -0.47
NFKB1-212ENST00000600343 BLMP54132 1417 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-212ENST00000600343 CLUAP1Q96AJ1 413 aa12.1□□□□□ -0.47
NFKB1-212ENST00000600343 DIAPH3Q9NSV4 1193 aa12.1□□□□□ -0.47
NFKB1-212ENST00000600343 ZMYM3Q14202 1370 aa12.1□□□□□ -0.47
NFKB1-212ENST00000600343 LMOD3Q0VAK6 560 aa12.1□□□□□ -0.47
NFKB1-212ENST00000600343 GTF2A1P52655 376 aaPredicted RBP12.09□□□□□ -0.47
NFKB1-212ENST00000600343 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
NFKB1-212ENST00000600343 BAG4O95429 457 aaKnown RBP12.09□□□□□ -0.47
NFKB1-212ENST00000600343 CFAP43Q8NDM7 1665 aa12.09□□□□□ -0.47
NFKB1-212ENST00000600343 DENND4BO75064 1496 aaPredicted RBP12.09□□□□□ -0.47
NFKB1-212ENST00000600343 CTTNBP2Q8WZ74 1663 aa12.09□□□□□ -0.47
NFKB1-212ENST00000600343 RSPH14Q9UHP6 348 aa12.08□□□□□ -0.47
NFKB1-212ENST00000600343 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
NFKB1-212ENST00000600343 FKBP5Q13451 457 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-212ENST00000600343 EP400NLQ6ZTU2 488 aa12.08□□□□□ -0.48
NFKB1-212ENST00000600343 BANK1Q8NDB2 785 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms