RNA–Protein interactions for RNA: ENST00000599981.5

DDX49-210, Transcript of DEAD-box helicase 49, humanhuman

TSL 2

Gene DDX49, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-210ENST00000599981 PIK3C2BO00750 1634 aa24.86■■□□□ 1.57
DDX49-210ENST00000599981 COL16A1Q07092 1604 aaPredicted RBP24.86■■□□□ 1.57
DDX49-210ENST00000599981 PRDM15P57071 1507 aaPredicted RBP24.86■■□□□ 1.57
DDX49-210ENST00000599981 MSH6P52701 1360 aa24.84■■□□□ 1.57
DDX49-210ENST00000599981 TMEM2Q9UHN6 1383 aa24.83■■□□□ 1.57
DDX49-210ENST00000599981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.83■■□□□ 1.57
DDX49-210ENST00000599981 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.56
DDX49-210ENST00000599981 SLAIN2Q9P270 581 aa24.81■■□□□ 1.56
DDX49-210ENST00000599981 SPATA31A6Q5VVP1 1343 aa24.81■■□□□ 1.56
DDX49-210ENST00000599981 NWD1Q149M9 1564 aa24.8■■□□□ 1.56
DDX49-210ENST00000599981 SLC26A8Q96RN1 970 aa24.79■■□□□ 1.56
DDX49-210ENST00000599981 STAG3Q9UJ98 1225 aa24.79■■□□□ 1.56
DDX49-210ENST00000599981 RXRBP28702 533 aa24.78■■□□□ 1.56
DDX49-210ENST00000599981 TET3O43151 1660 aa24.77■■□□□ 1.56
DDX49-210ENST00000599981 KANK1Q14678 1352 aa24.77■■□□□ 1.56
DDX49-210ENST00000599981 EFCAB6Q5THR3 1501 aa24.76■■□□□ 1.55
DDX49-210ENST00000599981 KDM5AP29375 1690 aaKnown RBP24.76■■□□□ 1.55
DDX49-210ENST00000599981 ARHGAP31Q2M1Z3 1444 aa24.75■■□□□ 1.55
DDX49-210ENST00000599981 CDK12Q9NYV4 1490 aaPredicted RBP24.75■■□□□ 1.55
DDX49-210ENST00000599981 SHPRHQ149N8 1683 aa24.75■■□□□ 1.55
DDX49-210ENST00000599981 NAIPQ13075 1403 aa24.74■■□□□ 1.55
DDX49-210ENST00000599981 HFM1A2PYH4 1435 aa24.7■■□□□ 1.55
DDX49-210ENST00000599981 LMTK2Q8IWU2 1503 aa24.69■■□□□ 1.54
DDX49-210ENST00000599981 UNC13BO14795 1591 aa24.68■■□□□ 1.54
DDX49-210ENST00000599981 GCC2Q8IWJ2 1684 aa24.67■■□□□ 1.54
DDX49-210ENST00000599981 BCANQ96GW7 911 aa24.67■■□□□ 1.54
DDX49-210ENST00000599981 AHDC1Q5TGY3 1603 aaPredicted RBP24.67■■□□□ 1.54
DDX49-210ENST00000599981 CHD2O14647 1828 aaKnown RBP24.64■■□□□ 1.54
DDX49-210ENST00000599981 NUP155O75694 1391 aa24.64■■□□□ 1.53
DDX49-210ENST00000599981 IDI1Q13907 227 aa24.62■■□□□ 1.53
DDX49-210ENST00000599981 ADGRB3O60242 1522 aa24.61■■□□□ 1.53
DDX49-210ENST00000599981 NUTM2BA6NNL0 878 aaPredicted RBP24.61■■□□□ 1.53
DDX49-210ENST00000599981 NUTM2EB1AL46 878 aaPredicted RBP24.61■■□□□ 1.53
DDX49-210ENST00000599981 NUTM2AQ8IVF1 878 aaPredicted RBP24.61■■□□□ 1.53
DDX49-210ENST00000599981 RGS12O14924 1447 aa24.61■■□□□ 1.53
DDX49-210ENST00000599981 AFF2P51816 1311 aa24.61■■□□□ 1.53
DDX49-210ENST00000599981 C14orf37Q86TY3 774 aa24.6■■□□□ 1.53
DDX49-210ENST00000599981 IQGAP3Q86VI3 1631 aa24.58■■□□□ 1.53
DDX49-210ENST00000599981 DIP2AQ14689 1571 aa24.58■■□□□ 1.52
DDX49-210ENST00000599981 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.58■■□□□ 1.52
DDX49-210ENST00000599981 NCOA3Q9Y6Q9 1424 aa24.55■■□□□ 1.52
DDX49-210ENST00000599981 NUTM2DQ5VT03 806 aaPredicted RBP24.55■■□□□ 1.52
DDX49-210ENST00000599981 CADPS2Q86UW7 1296 aa24.54■■□□□ 1.52
DDX49-210ENST00000599981 SETD5Q9C0A6 1442 aa24.52■■□□□ 1.52
DDX49-210ENST00000599981 RPRD2Q5VT52 1461 aaKnown RBP24.52■■□□□ 1.52
DDX49-210ENST00000599981 ATF3P18847 181 aa24.52■■□□□ 1.52
DDX49-210ENST00000599981 NOS1P29475 1434 aa24.52■■□□□ 1.52
DDX49-210ENST00000599981 RBM6P78332 1123 aaKnown RBP24.51■■□□□ 1.51
DDX49-210ENST00000599981 FOXD1Q16676 465 aa24.51■■□□□ 1.51
DDX49-210ENST00000599981 PLEKHG1Q9ULL1 1385 aa24.5■■□□□ 1.51
DDX49-210ENST00000599981 QTRT2Q9H974 415 aaKnown RBP24.49■■□□□ 1.51
DDX49-210ENST00000599981 ZRANB1Q9UGI0 708 aa24.49■■□□□ 1.51
DDX49-210ENST00000599981 E9PCH4 1651 aa24.49■■□□□ 1.51
DDX49-210ENST00000599981 MYO5BQ9ULV0 1848 aa24.49■■□□□ 1.51
DDX49-210ENST00000599981 PPP1R15AO75807 674 aaPredicted RBP24.48■■□□□ 1.51
DDX49-210ENST00000599981 ATAD2Q6PL18 1390 aa24.47■■□□□ 1.51
DDX49-210ENST00000599981 C8orf37Q96NL8 207 aa24.47■■□□□ 1.51
DDX49-210ENST00000599981 C19orf44Q9H6X5 657 aa24.47■■□□□ 1.51
DDX49-210ENST00000599981 SETBP1Q9Y6X0 1596 aa24.46■■□□□ 1.51
DDX49-210ENST00000599981 ZFYVE9O95405 1425 aa24.46■■□□□ 1.51
DDX49-210ENST00000599981 BRINP3Q76B58 766 aa24.46■■□□□ 1.51
DDX49-210ENST00000599981 SLC52A1Q9NWF4 448 aa24.44■■□□□ 1.5
DDX49-210ENST00000599981 RAB3GAP2Q9H2M9 1393 aa24.43■■□□□ 1.5
DDX49-210ENST00000599981 SLC4A1APQ9BWU0 796 aaKnown RBP24.43■■□□□ 1.5
DDX49-210ENST00000599981 ASXL1Q8IXJ9 1541 aa24.43■■□□□ 1.5
DDX49-210ENST00000599981 RIMS2Q9UQ26 1411 aa24.43■■□□□ 1.5
DDX49-210ENST00000599981 ACIN1Q9UKV3 1341 aaKnown RBP24.42■■□□□ 1.5
DDX49-210ENST00000599981 NHSL1Q5SYE7 1610 aa24.42■■□□□ 1.5
DDX49-210ENST00000599981 TBX22Q9Y458 520 aa24.41■■□□□ 1.5
DDX49-210ENST00000599981 HDGFP51858 240 aaKnown RBP24.4■■□□□ 1.5
DDX49-210ENST00000599981 NGLY1Q96IV0 654 aa24.4■■□□□ 1.5
DDX49-210ENST00000599981 EP400Q96L91 3159 aa24.38■■□□□ 1.49
DDX49-210ENST00000599981 MPHOSPH9Q99550 1183 aa24.38■■□□□ 1.49
DDX49-210ENST00000599981 HRCP23327 699 aa24.37■■□□□ 1.49
DDX49-210ENST00000599981 LRRC59Q96AG4 307 aaKnown RBP24.36■■□□□ 1.49
DDX49-210ENST00000599981 TMEM131LA2VDJ0 1609 aa24.35■■□□□ 1.49
DDX49-210ENST00000599981 DCCP43146 1447 aa24.35■■□□□ 1.49
DDX49-210ENST00000599981 ADAMTS13Q76LX8 1427 aa24.35■■□□□ 1.49
DDX49-210ENST00000599981 PNPLA6Q8IY17 1366 aa24.33■■□□□ 1.49
DDX49-210ENST00000599981 PIK3R4Q99570 1358 aa24.33■■□□□ 1.49
DDX49-210ENST00000599981 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
DDX49-210ENST00000599981 TRPM2O94759 1503 aa24.31■■□□□ 1.48
DDX49-210ENST00000599981 MST1RQ04912 1400 aa24.3■■□□□ 1.48
DDX49-210ENST00000599981 ADAMTS2O95450 1211 aa24.3■■□□□ 1.48
DDX49-210ENST00000599981 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.3■■□□□ 1.48
DDX49-210ENST00000599981 CHGAP10645 457 aaKnown RBP24.28■■□□□ 1.48
DDX49-210ENST00000599981 AMOTL2Q9Y2J4 779 aa24.27■■□□□ 1.48
DDX49-210ENST00000599981 DDX17Q92841 729 aaKnown RBP24.26■■□□□ 1.47
DDX49-210ENST00000599981 USP21Q9UK80 565 aa24.26■■□□□ 1.47
DDX49-210ENST00000599981 TRPC5Q9UL62 973 aaPredicted RBP24.25■■□□□ 1.47
DDX49-210ENST00000599981 PTPRUQ92729 1446 aa24.25■■□□□ 1.47
DDX49-210ENST00000599981 CCDC125Q86Z20 511 aa24.24■■□□□ 1.47
DDX49-210ENST00000599981 CLTCL1P53675 1640 aa24.23■■□□□ 1.47
DDX49-210ENST00000599981 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
DDX49-210ENST00000599981 XRN1Q8IZH2 1706 aaKnown RBP24.21■■□□□ 1.47
DDX49-210ENST00000599981 ATRNO75882 1429 aa24.18■■□□□ 1.46
DDX49-210ENST00000599981 LRP5O75197 1615 aa24.18■■□□□ 1.46
DDX49-210ENST00000599981 PTCH1Q13635 1447 aa24.15■■□□□ 1.46
DDX49-210ENST00000599981 CCDC144AA2RUR9 1427 aa24.14■■□□□ 1.45
DDX49-210ENST00000599981 ZNF326Q5BKZ1 582 aaKnown RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms