RNA–Protein interactions for RNA: ENST00000599476.1

GRAMD1A-210, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-210ENST00000599476 SYNMO15061 1565 aa11.74□□□□□ -0.53
GRAMD1A-210ENST00000599476 CHGAP10645 457 aaKnown RBP11.73□□□□□ -0.53
GRAMD1A-210ENST00000599476 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.73□□□□□ -0.53
GRAMD1A-210ENST00000599476 TONSLQ96HA7 1378 aa11.73□□□□□ -0.53
GRAMD1A-210ENST00000599476 E9PCH4 1651 aa11.72□□□□□ -0.53
GRAMD1A-210ENST00000599476 SLIT1O75093 1534 aa11.72□□□□□ -0.53
GRAMD1A-210ENST00000599476 MED14O60244 1454 aa11.72□□□□□ -0.53
GRAMD1A-210ENST00000599476 ARHGAP23Q9P227 1491 aa11.72□□□□□ -0.53
GRAMD1A-210ENST00000599476 ZNF335Q9H4Z2 1342 aaPredicted RBP11.72□□□□□ -0.53
GRAMD1A-210ENST00000599476 TIMELESSQ9UNS1 1208 aa11.72□□□□□ -0.53
GRAMD1A-210ENST00000599476 NPHP4O75161 1426 aaPredicted RBP11.71□□□□□ -0.53
GRAMD1A-210ENST00000599476 FOXD1Q16676 465 aa11.71□□□□□ -0.53
GRAMD1A-210ENST00000599476 POTEAQ6S8J7 498 aa11.71□□□□□ -0.53
GRAMD1A-210ENST00000599476 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
GRAMD1A-210ENST00000599476 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.54
GRAMD1A-210ENST00000599476 KDM5AP29375 1690 aaKnown RBP11.71□□□□□ -0.54
GRAMD1A-210ENST00000599476 SCAF11Q99590 1463 aaKnown RBP11.7□□□□□ -0.54
GRAMD1A-210ENST00000599476 PIK3C2BO00750 1634 aa11.7□□□□□ -0.54
GRAMD1A-210ENST00000599476 TOM1O60784 492 aa11.68□□□□□ -0.54
GRAMD1A-210ENST00000599476 ADGRB3O60242 1522 aa11.68□□□□□ -0.54
GRAMD1A-210ENST00000599476 ANKRD30BQ9BXX2 1392 aa11.67□□□□□ -0.54
GRAMD1A-210ENST00000599476 PPP1R15AO75807 674 aaPredicted RBP11.67□□□□□ -0.54
GRAMD1A-210ENST00000599476 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
GRAMD1A-210ENST00000599476 IFFO2Q5TF58 517 aa11.67□□□□□ -0.54
GRAMD1A-210ENST00000599476 UPF1Q92900 1129 aaKnown RBP eCLIP11.67□□□□□ -0.54
GRAMD1A-210ENST00000599476 RIMS2Q9UQ26 1411 aa11.67□□□□□ -0.54
GRAMD1A-210ENST00000599476 NEURL4Q96JN8 1562 aa11.67□□□□□ -0.54
GRAMD1A-210ENST00000599476 BCANQ96GW7 911 aa11.66□□□□□ -0.54
GRAMD1A-210ENST00000599476 TMEM131LA2VDJ0 1609 aa11.66□□□□□ -0.54
GRAMD1A-210ENST00000599476 ZFYVE9O95405 1425 aa11.66□□□□□ -0.54
GRAMD1A-210ENST00000599476 SPHKAPQ2M3C7 1700 aa11.66□□□□□ -0.54
GRAMD1A-210ENST00000599476 TRPM2O94759 1503 aa11.65□□□□□ -0.54
GRAMD1A-210ENST00000599476 RPGRIP1LQ68CZ1 1315 aa11.65□□□□□ -0.54
GRAMD1A-210ENST00000599476 CCDC144AA2RUR9 1427 aa11.65□□□□□ -0.54
GRAMD1A-210ENST00000599476 PLEKHG1Q9ULL1 1385 aa11.65□□□□□ -0.55
GRAMD1A-210ENST00000599476 POLR1AO95602 1720 aaPredicted RBP11.64□□□□□ -0.55
GRAMD1A-210ENST00000599476 VGFO15240 615 aaPredicted RBP11.64□□□□□ -0.55
GRAMD1A-210ENST00000599476 TBX22Q9Y458 520 aa11.64□□□□□ -0.55
GRAMD1A-210ENST00000599476 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
GRAMD1A-210ENST00000599476 SLC26A8Q96RN1 970 aa11.63□□□□□ -0.55
GRAMD1A-210ENST00000599476 KCNA6P17658 529 aa11.62□□□□□ -0.55
GRAMD1A-210ENST00000599476 IQGAP1P46940 1657 aa11.62□□□□□ -0.55
GRAMD1A-210ENST00000599476 CLTCL1P53675 1640 aa11.6□□□□□ -0.55
GRAMD1A-210ENST00000599476 CPS1P31327 1500 aa11.6□□□□□ -0.55
GRAMD1A-210ENST00000599476 RGL3Q3MIN7 710 aa11.59□□□□□ -0.55
GRAMD1A-210ENST00000599476 PIK3R4Q99570 1358 aa11.58□□□□□ -0.56
GRAMD1A-210ENST00000599476 L3MBTL2Q969R5 705 aa11.58□□□□□ -0.56
GRAMD1A-210ENST00000599476 KIF1BO60333 1816 aa11.58□□□□□ -0.56
GRAMD1A-210ENST00000599476 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
GRAMD1A-210ENST00000599476 MYO5BQ9ULV0 1848 aa11.57□□□□□ -0.56
GRAMD1A-210ENST00000599476 SPATA31E1Q6ZUB1 1445 aa11.57□□□□□ -0.56
GRAMD1A-210ENST00000599476 ADAMTS13Q76LX8 1427 aa11.56□□□□□ -0.56
GRAMD1A-210ENST00000599476 PROSER2Q86WR7 435 aaPredicted RBP11.56□□□□□ -0.56
GRAMD1A-210ENST00000599476 AMOTL2Q9Y2J4 779 aa11.54□□□□□ -0.56
GRAMD1A-210ENST00000599476 NEXMIFQ5QGS0 1516 aa11.54□□□□□ -0.56
GRAMD1A-210ENST00000599476 DCAF11Q8TEB1 546 aa11.53□□□□□ -0.56
GRAMD1A-210ENST00000599476 KDM2AQ9Y2K7 1162 aa11.53□□□□□ -0.56
GRAMD1A-210ENST00000599476 LRRC7Q96NW7 1537 aa11.53□□□□□ -0.56
GRAMD1A-210ENST00000599476 DIP2AQ14689 1571 aa11.53□□□□□ -0.56
GRAMD1A-210ENST00000599476 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.56
GRAMD1A-210ENST00000599476 ZNF316A6NFI3 1004 aaPredicted RBP11.52□□□□□ -0.57
GRAMD1A-210ENST00000599476 SETBP1Q9Y6X0 1596 aa11.52□□□□□ -0.57
GRAMD1A-210ENST00000599476 ADGRF5Q8IZF2 1346 aa11.52□□□□□ -0.57
GRAMD1A-210ENST00000599476 TMEM94Q12767 1356 aa11.51□□□□□ -0.57
GRAMD1A-210ENST00000599476 NCOA3Q9Y6Q9 1424 aa11.51□□□□□ -0.57
GRAMD1A-210ENST00000599476 NKTRP30414 1462 aaKnown RBP11.51□□□□□ -0.57
GRAMD1A-210ENST00000599476 METP08581 1390 aa11.5□□□□□ -0.57
GRAMD1A-210ENST00000599476 C19orf44Q9H6X5 657 aa11.49□□□□□ -0.57
GRAMD1A-210ENST00000599476 C14orf93Q9H972 538 aaKnown RBP11.49□□□□□ -0.57
GRAMD1A-210ENST00000599476 STRCP1A6NGW2 1772 aa11.49□□□□□ -0.57
GRAMD1A-210ENST00000599476 PTPRUQ92729 1446 aa11.48□□□□□ -0.57
GRAMD1A-210ENST00000599476 NWD1Q149M9 1564 aa11.48□□□□□ -0.57
GRAMD1A-210ENST00000599476 CHD2O14647 1828 aaKnown RBP11.48□□□□□ -0.57
GRAMD1A-210ENST00000599476 RBM33Q96EV2 1170 aaKnown RBP11.47□□□□□ -0.57
GRAMD1A-210ENST00000599476 PPLO60437 1756 aa11.46□□□□□ -0.57
GRAMD1A-210ENST00000599476 ALKQ9UM73 1620 aa11.46□□□□□ -0.57
GRAMD1A-210ENST00000599476 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.57
GRAMD1A-210ENST00000599476 MSH6P52701 1360 aa11.46□□□□□ -0.57
GRAMD1A-210ENST00000599476 EIF4G2P78344 907 aaKnown RBP eCLIP11.46□□□□□ -0.57
GRAMD1A-210ENST00000599476 C14orf37Q86TY3 774 aa11.46□□□□□ -0.57
GRAMD1A-210ENST00000599476 MYOM2P54296 1465 aa11.45□□□□□ -0.58
GRAMD1A-210ENST00000599476 PIK3C2GO75747 1445 aa11.45□□□□□ -0.58
GRAMD1A-210ENST00000599476 CFAP70Q5T0N1 1121 aa11.45□□□□□ -0.58
GRAMD1A-210ENST00000599476 CADPS2Q86UW7 1296 aa11.45□□□□□ -0.58
GRAMD1A-210ENST00000599476 SIRT1Q96EB6 747 aa11.45□□□□□ -0.58
GRAMD1A-210ENST00000599476 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
GRAMD1A-210ENST00000599476 ABCC11Q96J66 1382 aa11.44□□□□□ -0.58
GRAMD1A-210ENST00000599476 ATF3P18847 181 aa11.44□□□□□ -0.58
GRAMD1A-210ENST00000599476 NBPF8Q3BBV2 869 aa11.44□□□□□ -0.58
GRAMD1A-210ENST00000599476 TMEM132EQ6IEE7 984 aa11.44□□□□□ -0.58
GRAMD1A-210ENST00000599476 SLAIN2Q9P270 581 aa11.44□□□□□ -0.58
GRAMD1A-210ENST00000599476 ROCK2O75116 1388 aaKnown RBP11.43□□□□□ -0.58
GRAMD1A-210ENST00000599476 LRPPRCP42704 1394 aaKnown RBP11.43□□□□□ -0.58
GRAMD1A-210ENST00000599476 CARD11Q9BXL7 1154 aa11.43□□□□□ -0.58
GRAMD1A-210ENST00000599476 PRAG1Q86YV5 1406 aa11.43□□□□□ -0.58
GRAMD1A-210ENST00000599476 STK26Q9P289 416 aa11.42□□□□□ -0.58
GRAMD1A-210ENST00000599476 RALGAPBQ86X10 1494 aa11.42□□□□□ -0.58
GRAMD1A-210ENST00000599476 FAM135BQ49AJ0 1406 aa11.42□□□□□ -0.58
GRAMD1A-210ENST00000599476 IFT172Q9UG01 1749 aa11.41□□□□□ -0.58
GRAMD1A-210ENST00000599476 KCNA4P22459 653 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms