RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 METTL3Q86U44 580 aaKnown RBP14.65□□□□□ -0.06
LINC00343-208ENST00000599264 FECHP22830 423 aa14.64□□□□□ -0.07
LINC00343-208ENST00000599264 RSPH4AQ5TD94 716 aa14.62□□□□□ -0.07
LINC00343-208ENST00000599264 APLP1P51693 650 aa14.61□□□□□ -0.07
LINC00343-208ENST00000599264 A0A0G2JS52 829 aa14.6□□□□□ -0.07
LINC00343-208ENST00000599264 IL21Q9HBE4 155 aa14.6□□□□□ -0.07
LINC00343-208ENST00000599264 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.59□□□□□ -0.07
LINC00343-208ENST00000599264 KMT5BQ4FZB7 885 aa14.58□□□□□ -0.08
LINC00343-208ENST00000599264 MTRQ99707 1265 aa14.58□□□□□ -0.08
LINC00343-208ENST00000599264 RGS20O76081 388 aa14.56□□□□□ -0.08
LINC00343-208ENST00000599264 TJAP1Q5JTD0 557 aa14.56□□□□□ -0.08
LINC00343-208ENST00000599264 MAP2K5Q13163 448 aa14.55□□□□□ -0.08
LINC00343-208ENST00000599264 LMOD2Q6P5Q4 547 aa14.54□□□□□ -0.08
LINC00343-208ENST00000599264 DAXXQ9UER7 740 aaPredicted RBP14.54□□□□□ -0.08
LINC00343-208ENST00000599264 PCDHB3Q9Y5E6 796 aa14.53□□□□□ -0.08
LINC00343-208ENST00000599264 MINK1Q8N4C8 1332 aaPredicted RBP14.51□□□□□ -0.09
LINC00343-208ENST00000599264 CFHP08603 1231 aa14.51□□□□□ -0.09
LINC00343-208ENST00000599264 ACTN4O43707 911 aaKnown RBP14.49□□□□□ -0.09
LINC00343-208ENST00000599264 COPS2P61201 443 aa14.49□□□□□ -0.09
LINC00343-208ENST00000599264 SULF1Q8IWU6 871 aa14.49□□□□□ -0.09
LINC00343-208ENST00000599264 IRF6O14896 467 aa14.48□□□□□ -0.09
LINC00343-208ENST00000599264 SLC10A3P09131 477 aa14.48□□□□□ -0.09
LINC00343-208ENST00000599264 RDH13Q8NBN7 331 aa14.46□□□□□ -0.09
LINC00343-208ENST00000599264 DDX11L8A8MPP1 907 aa14.45□□□□□ -0.1
LINC00343-208ENST00000599264 ZNF516Q92618 1163 aa14.45□□□□□ -0.1
LINC00343-208ENST00000599264 PHOX2BQ99453 314 aa14.44□□□□□ -0.1
LINC00343-208ENST00000599264 ZPR1O75312 459 aa14.43□□□□□ -0.1
LINC00343-208ENST00000599264 NLRP7Q8WX94 980 aa14.43□□□□□ -0.1
LINC00343-208ENST00000599264 KRI1Q8N9T8 703 aaKnown RBP14.42□□□□□ -0.1
LINC00343-208ENST00000599264 GGCXP38435 758 aa14.41□□□□□ -0.1
LINC00343-208ENST00000599264 BLOC1S3Q6QNY0 202 aa14.41□□□□□ -0.1
LINC00343-208ENST00000599264 CCDC102AQ96A19 550 aa14.4□□□□□ -0.1
LINC00343-208ENST00000599264 NR1I2O75469 434 aa14.39□□□□□ -0.11
LINC00343-208ENST00000599264 SLC24A1O60721 1099 aa14.37□□□□□ -0.11
LINC00343-208ENST00000599264 PPP1R18Q6NYC8 613 aa14.36□□□□□ -0.11
LINC00343-208ENST00000599264 BARGINQ6ZT62 677 aa14.35□□□□□ -0.11
LINC00343-208ENST00000599264 NKX2-3Q8TAU0 364 aa14.35□□□□□ -0.11
LINC00343-208ENST00000599264 ZC3H15Q8WU90 426 aaKnown RBP14.35□□□□□ -0.11
LINC00343-208ENST00000599264 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.35□□□□□ -0.11
LINC00343-208ENST00000599264 ZMYND10O75800 440 aa14.34□□□□□ -0.11
LINC00343-208ENST00000599264 GCGRP47871 477 aa14.34□□□□□ -0.11
LINC00343-208ENST00000599264 MDM2Q00987 491 aaPredicted RBP14.34□□□□□ -0.11
LINC00343-208ENST00000599264 CLCN1P35523 988 aa14.33□□□□□ -0.12
LINC00343-208ENST00000599264 TMUB1Q9BVT8 246 aa14.32□□□□□ -0.12
LINC00343-208ENST00000599264 ATP6V1AP38606 617 aa14.31□□□□□ -0.12
LINC00343-208ENST00000599264 GRIPAP1Q4V328 841 aa14.31□□□□□ -0.12
LINC00343-208ENST00000599264 GPCPD1Q9NPB8 672 aa14.3□□□□□ -0.12
LINC00343-208ENST00000599264 FUT2Q10981 343 aa14.29□□□□□ -0.12
LINC00343-208ENST00000599264 PUS10Q3MIT2 529 aaKnown RBP14.29□□□□□ -0.12
LINC00343-208ENST00000599264 SCUBE3Q8IX30 993 aa14.29□□□□□ -0.12
LINC00343-208ENST00000599264 CD46P15529 392 aa14.27□□□□□ -0.13
LINC00343-208ENST00000599264 TLL1O43897 1013 aa14.26□□□□□ -0.13
LINC00343-208ENST00000599264 ADH1BP00325 375 aa14.26□□□□□ -0.13
LINC00343-208ENST00000599264 MORN1Q5T089 497 aa14.25□□□□□ -0.13
LINC00343-208ENST00000599264 IRX2Q9BZI1 471 aaPredicted RBP14.25□□□□□ -0.13
LINC00343-208ENST00000599264 BCANQ96GW7 911 aa14.23□□□□□ -0.13
LINC00343-208ENST00000599264 PRKD2Q9BZL6 878 aa14.23□□□□□ -0.13
LINC00343-208ENST00000599264 SPSB2Q99619 263 aa14.22□□□□□ -0.13
LINC00343-208ENST00000599264 V9GY48 417 aaPredicted RBP14.22□□□□□ -0.13
LINC00343-208ENST00000599264 KDM4AO75164 1064 aa14.21□□□□□ -0.13
LINC00343-208ENST00000599264 USP46P62068 366 aa14.21□□□□□ -0.13
LINC00343-208ENST00000599264 SLC6A16Q9GZN6 736 aa14.21□□□□□ -0.13
LINC00343-208ENST00000599264 FAM217BQ9NTX9 383 aaPredicted RBP14.21□□□□□ -0.13
LINC00343-208ENST00000599264 TTLL12Q14166 644 aaPredicted RBP14.2□□□□□ -0.14
LINC00343-208ENST00000599264 FMNL1O95466 1100 aaPredicted RBP14.19□□□□□ -0.14
LINC00343-208ENST00000599264 S1PR4O95977 384 aa14.19□□□□□ -0.14
LINC00343-208ENST00000599264 SLC27A5Q9Y2P5 690 aa14.19□□□□□ -0.14
LINC00343-208ENST00000599264 RNF223E7ERA6 249 aa14.18□□□□□ -0.14
LINC00343-208ENST00000599264 AMHR2Q16671 573 aa14.18□□□□□ -0.14
LINC00343-208ENST00000599264 SALL2Q9Y467 1007 aaPredicted RBP14.18□□□□□ -0.14
LINC00343-208ENST00000599264 Q3C1V9 767 aa14.17□□□□□ -0.14
LINC00343-208ENST00000599264 ANKLE1Q8NAG6 615 aa14.17□□□□□ -0.14
LINC00343-208ENST00000599264 AK7Q96M32 723 aa14.17□□□□□ -0.14
LINC00343-208ENST00000599264 NUTM1Q86Y26 1132 aa14.15□□□□□ -0.14
LINC00343-208ENST00000599264 SSTR3P32745 418 aaPredicted RBP14.14□□□□□ -0.15
LINC00343-208ENST00000599264 THAP11Q96EK4 314 aa14.13□□□□□ -0.15
LINC00343-208ENST00000599264 BRICD5Q6PL45 260 aa14.11□□□□□ -0.15
LINC00343-208ENST00000599264 REPIN1Q9BWE0 567 aaKnown RBP14.11□□□□□ -0.15
LINC00343-208ENST00000599264 PPEF1O14829 653 aaPredicted RBP14.1□□□□□ -0.15
LINC00343-208ENST00000599264 TRIM66O15016 1216 aa14.1□□□□□ -0.15
LINC00343-208ENST00000599264 SLC19A1P41440 591 aa14.1□□□□□ -0.15
LINC00343-208ENST00000599264 LAPTM4AQ15012 233 aa14.1□□□□□ -0.15
LINC00343-208ENST00000599264 GIGYF2Q6Y7W6 1299 aaKnown RBP14.09□□□□□ -0.15
LINC00343-208ENST00000599264 HOXA2O43364 376 aa14.08□□□□□ -0.16
LINC00343-208ENST00000599264 MSS51Q4VC12 460 aa14.06□□□□□ -0.16
LINC00343-208ENST00000599264 RNF19BQ6ZMZ0 732 aa14.06□□□□□ -0.16
LINC00343-208ENST00000599264 FAM160A2Q8N612 972 aaPredicted RBP14.05□□□□□ -0.16
LINC00343-208ENST00000599264 GFRA3O60609 400 aa14.03□□□□□ -0.16
LINC00343-208ENST00000599264 PARP9Q8IXQ6 854 aa14.03□□□□□ -0.16
LINC00343-208ENST00000599264 USB1Q9BQ65 265 aaKnown RBP14.03□□□□□ -0.16
LINC00343-208ENST00000599264 DIXDC1Q155Q3 683 aa14.02□□□□□ -0.17
LINC00343-208ENST00000599264 SLC24A3Q9HC58 644 aa14.02□□□□□ -0.17
LINC00343-208ENST00000599264 BEGAINQ9BUH8 593 aa14.01□□□□□ -0.17
LINC00343-208ENST00000599264 SPRYD7Q5W111 196 aa14□□□□□ -0.17
LINC00343-208ENST00000599264 FCF1Q9Y324 198 aaKnown RBP14□□□□□ -0.17
LINC00343-208ENST00000599264 PDE4DQ08499 809 aa13.99□□□□□ -0.17
LINC00343-208ENST00000599264 ZNF598Q86UK7 904 aaKnown RBP13.99□□□□□ -0.17
LINC00343-208ENST00000599264 SPIRE2Q8WWL2 714 aa13.99□□□□□ -0.17
LINC00343-208ENST00000599264 HLA-CQ95604 372 aa13.99□□□□□ -0.17
LINC00343-208ENST00000599264 FDX1P10109 184 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms