RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 ARHGAP35Q9NRY4 1499 aa16.43■□□□□ 0.22
SMG9-207ENST00000598860 MLLT3P42568 568 aaPredicted RBP16.42■□□□□ 0.22
SMG9-207ENST00000598860 PTGER2P43116 358 aa16.42■□□□□ 0.22
SMG9-207ENST00000598860 ABCA8O94911 1581 aa16.42■□□□□ 0.22
SMG9-207ENST00000598860 GRXCR2A6NFK2 248 aa16.41■□□□□ 0.22
SMG9-207ENST00000598860 ZCCHC11Q5TAX3 1644 aaKnown RBP16.41■□□□□ 0.22
SMG9-207ENST00000598860 ERBB3P21860 1342 aa16.4■□□□□ 0.22
SMG9-207ENST00000598860 ZC3H15Q8WU90 426 aaKnown RBP16.38■□□□□ 0.21
SMG9-207ENST00000598860 FAM205CA6NFA0 338 aa16.37■□□□□ 0.21
SMG9-207ENST00000598860 ZNF454Q8N9F8 522 aa16.37■□□□□ 0.21
SMG9-207ENST00000598860 TSPOAP1O95153 1857 aa16.37■□□□□ 0.21
SMG9-207ENST00000598860 ARID3CA6NKF2 412 aa16.36■□□□□ 0.21
SMG9-207ENST00000598860 KCNH8Q96L42 1107 aa16.36■□□□□ 0.21
SMG9-207ENST00000598860 GLI2P10070 1586 aa16.35■□□□□ 0.21
SMG9-207ENST00000598860 PHF14O94880 888 aa16.35■□□□□ 0.21
SMG9-207ENST00000598860 FOSBP53539 338 aa16.35■□□□□ 0.21
SMG9-207ENST00000598860 SMYD5Q6GMV2 418 aa16.35■□□□□ 0.21
SMG9-207ENST00000598860 PCDHGA10Q9Y5H3 936 aa16.35■□□□□ 0.21
SMG9-207ENST00000598860 FHOD3Q2V2M9 1422 aa16.35■□□□□ 0.21
SMG9-207ENST00000598860 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
SMG9-207ENST00000598860 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
SMG9-207ENST00000598860 VARS2Q5ST30 1063 aaKnown RBP16.34■□□□□ 0.21
SMG9-207ENST00000598860 WDR7Q9Y4E6 1490 aa16.34■□□□□ 0.21
SMG9-207ENST00000598860 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
SMG9-207ENST00000598860 ATP10BO94823 1461 aa16.33■□□□□ 0.2
SMG9-207ENST00000598860 RAPGEF6Q8TEU7 1601 aa16.3■□□□□ 0.2
SMG9-207ENST00000598860 VPS8Q8N3P4 1428 aa16.3■□□□□ 0.2
SMG9-207ENST00000598860 PPP4R3BQ5MIZ7 849 aa16.3■□□□□ 0.2
SMG9-207ENST00000598860 HS3ST6Q96QI5 342 aa16.3■□□□□ 0.2
SMG9-207ENST00000598860 EPAS1Q99814 870 aa16.3■□□□□ 0.2
SMG9-207ENST00000598860 OSBPP22059 807 aa16.29■□□□□ 0.2
SMG9-207ENST00000598860 TYW1BQ6NUM6 668 aa16.29■□□□□ 0.2
SMG9-207ENST00000598860 ZDHHC16Q969W1 377 aa16.28■□□□□ 0.2
SMG9-207ENST00000598860 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
SMG9-207ENST00000598860 PCF11O94913 1555 aaKnown RBP16.27■□□□□ 0.2
SMG9-207ENST00000598860 POTEB3A0JP26 581 aa16.27■□□□□ 0.2
SMG9-207ENST00000598860 POTEBQ6S5H4 581 aa16.27■□□□□ 0.2
SMG9-207ENST00000598860 RBM33Q96EV2 1170 aaKnown RBP16.26■□□□□ 0.19
SMG9-207ENST00000598860 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
SMG9-207ENST00000598860 MAP3K4Q9Y6R4 1608 aa16.26■□□□□ 0.19
SMG9-207ENST00000598860 POTEMA6NI47 508 aa16.25■□□□□ 0.19
SMG9-207ENST00000598860 KDM6BO15054 1643 aa16.25■□□□□ 0.19
SMG9-207ENST00000598860 NUP153P49790 1475 aaKnown RBP16.24■□□□□ 0.19
SMG9-207ENST00000598860 TEX14Q8IWB6 1497 aa16.24■□□□□ 0.19
SMG9-207ENST00000598860 PLEKHD1A6NEE1 506 aa16.24■□□□□ 0.19
SMG9-207ENST00000598860 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
SMG9-207ENST00000598860 TMEM132AQ24JP5 1023 aa16.24■□□□□ 0.19
SMG9-207ENST00000598860 FBXW7Q969H0 707 aa16.24■□□□□ 0.19
SMG9-207ENST00000598860 CD109Q6YHK3 1445 aa16.24■□□□□ 0.19
SMG9-207ENST00000598860 PPRC1Q5VV67 1664 aaKnown RBP16.24■□□□□ 0.19
SMG9-207ENST00000598860 CASKIN1Q8WXD9 1431 aa16.23■□□□□ 0.19
SMG9-207ENST00000598860 ADAM33Q9BZ11 813 aa16.23■□□□□ 0.19
SMG9-207ENST00000598860 ATP1B4Q9UN42 357 aaPredicted RBP16.23■□□□□ 0.19
SMG9-207ENST00000598860 EN1Q05925 392 aaPredicted RBP16.22■□□□□ 0.19
SMG9-207ENST00000598860 POTEGQ6S5H5 508 aa16.22■□□□□ 0.19
SMG9-207ENST00000598860 RBM26Q5T8P6 1007 aaKnown RBP16.21■□□□□ 0.19
SMG9-207ENST00000598860 SLC24A3Q9HC58 644 aa16.21■□□□□ 0.19
SMG9-207ENST00000598860 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
SMG9-207ENST00000598860 MAP3K7O43318 606 aa16.2■□□□□ 0.18
SMG9-207ENST00000598860 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
SMG9-207ENST00000598860 ZMYND10O75800 440 aa16.19■□□□□ 0.18
SMG9-207ENST00000598860 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
SMG9-207ENST00000598860 ZNF687Q8N1G0 1237 aa16.19■□□□□ 0.18
SMG9-207ENST00000598860 MAGI3Q5TCQ9 1506 aa16.19■□□□□ 0.18
SMG9-207ENST00000598860 CCDC18Q5T9S5 1454 aa16.18■□□□□ 0.18
SMG9-207ENST00000598860 BCL2L12Q9HB09 334 aa16.17■□□□□ 0.18
SMG9-207ENST00000598860 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
SMG9-207ENST00000598860 TSR1Q2NL82 804 aaKnown RBP16.15■□□□□ 0.18
SMG9-207ENST00000598860 C6orf132Q5T0Z8 1188 aa16.15■□□□□ 0.18
SMG9-207ENST00000598860 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
SMG9-207ENST00000598860 COL17A1Q9UMD9 1497 aaPredicted RBP16.15■□□□□ 0.18
SMG9-207ENST00000598860 CDK11AQ9UQ88 783 aaPredicted RBP16.14■□□□□ 0.17
SMG9-207ENST00000598860 ABCA9Q8IUA7 1624 aa16.13■□□□□ 0.17
SMG9-207ENST00000598860 PTPREP23469 700 aa16.13■□□□□ 0.17
SMG9-207ENST00000598860 POTEEQ6S8J3 1075 aa16.13■□□□□ 0.17
SMG9-207ENST00000598860 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
SMG9-207ENST00000598860 NUTM2FA1L443 756 aa16.12■□□□□ 0.17
SMG9-207ENST00000598860 CDHR5Q9HBB8 845 aa16.12■□□□□ 0.17
SMG9-207ENST00000598860 AXIN2Q9Y2T1 843 aa16.12■□□□□ 0.17
SMG9-207ENST00000598860 CDK13Q14004 1512 aaKnown RBP16.12■□□□□ 0.17
SMG9-207ENST00000598860 GPIHBP1Q8IV16 184 aa16.11■□□□□ 0.17
SMG9-207ENST00000598860 KCNK17Q96T54 332 aa16.11■□□□□ 0.17
SMG9-207ENST00000598860 BARGINQ6ZT62 677 aa16.1■□□□□ 0.17
SMG9-207ENST00000598860 PHLDB1Q86UU1 1377 aa16.1■□□□□ 0.17
SMG9-207ENST00000598860 ARHGAP33O14559 1287 aa16.09■□□□□ 0.17
SMG9-207ENST00000598860 PSEN2P49810 448 aa16.09■□□□□ 0.17
SMG9-207ENST00000598860 PCDH10Q9P2E7 1040 aa16.09■□□□□ 0.17
SMG9-207ENST00000598860 NEUROD2Q15784 382 aa16.08■□□□□ 0.16
SMG9-207ENST00000598860 PBX2P40425 430 aa16.07■□□□□ 0.16
SMG9-207ENST00000598860 ARAP3Q8WWN8 1544 aa16.06■□□□□ 0.16
SMG9-207ENST00000598860 EHBP1L1Q8N3D4 1523 aa16.05■□□□□ 0.16
SMG9-207ENST00000598860 COL9A1P20849 921 aa16.05■□□□□ 0.16
SMG9-207ENST00000598860 NEO1Q92859 1461 aa16.04■□□□□ 0.16
SMG9-207ENST00000598860 CDAN1Q8IWY9 1227 aa16.04■□□□□ 0.16
SMG9-207ENST00000598860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMG9-207ENST00000598860 PPP1R3GB7ZBB8 358 aa16.03■□□□□ 0.16
SMG9-207ENST00000598860 DMRTA1Q5VZB9 504 aa16.02■□□□□ 0.16
SMG9-207ENST00000598860 NPDC1Q9NQX5 325 aaPredicted RBP16.02■□□□□ 0.16
SMG9-207ENST00000598860 TIMELESSQ9UNS1 1208 aa16.02■□□□□ 0.16
SMG9-207ENST00000598860 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms