RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 UNC13BO14795 1591 aa22.58■■□□□ 1.21
ARHGEF1-213ENST00000595897 BRPF3Q9ULD4 1205 aa22.57■■□□□ 1.2
ARHGEF1-213ENST00000595897 APAF1O14727 1248 aa22.55■■□□□ 1.2
ARHGEF1-213ENST00000595897 FRAT1Q92837 279 aaPredicted RBP22.55■■□□□ 1.2
ARHGEF1-213ENST00000595897 MYO5CQ9NQX4 1742 aa22.53■■□□□ 1.2
ARHGEF1-213ENST00000595897 BCAR3O75815 825 aa22.53■■□□□ 1.2
ARHGEF1-213ENST00000595897 IQGAP3Q86VI3 1631 aa22.52■■□□□ 1.2
ARHGEF1-213ENST00000595897 ATP10AO60312 1499 aa22.52■■□□□ 1.2
ARHGEF1-213ENST00000595897 SPINK5Q9NQ38 1064 aaPredicted RBP22.52■■□□□ 1.2
ARHGEF1-213ENST00000595897 MAST1Q9Y2H9 1570 aa22.5■■□□□ 1.19
ARHGEF1-213ENST00000595897 FRAT2O75474 233 aaPredicted RBP22.5■■□□□ 1.19
ARHGEF1-213ENST00000595897 DUOX2Q9NRD8 1548 aa22.49■■□□□ 1.19
ARHGEF1-213ENST00000595897 CANXP27824 592 aaKnown RBP22.48■■□□□ 1.19
ARHGEF1-213ENST00000595897 PIK3C2GO75747 1445 aa22.48■■□□□ 1.19
ARHGEF1-213ENST00000595897 EIF3AQ14152 1382 aaKnown RBP22.48■■□□□ 1.19
ARHGEF1-213ENST00000595897 ASXL1Q8IXJ9 1541 aa22.48■■□□□ 1.19
ARHGEF1-213ENST00000595897 E9PSI1 815 aa22.48■■□□□ 1.19
ARHGEF1-213ENST00000595897 NKTRP30414 1462 aaKnown RBP22.48■■□□□ 1.19
ARHGEF1-213ENST00000595897 TRMT2AQ8IZ69 625 aaKnown RBP22.47■■□□□ 1.19
ARHGEF1-213ENST00000595897 TTC37Q6PGP7 1564 aa22.47■■□□□ 1.19
ARHGEF1-213ENST00000595897 SCAF11Q99590 1463 aaKnown RBP22.46■■□□□ 1.19
ARHGEF1-213ENST00000595897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.45■■□□□ 1.18
ARHGEF1-213ENST00000595897 PLXNC1O60486 1568 aa22.45■■□□□ 1.18
ARHGEF1-213ENST00000595897 RNF17Q9BXT8 1623 aaKnown RBP22.44■■□□□ 1.18
ARHGEF1-213ENST00000595897 IGHDP01880 384 aa22.44■■□□□ 1.18
ARHGEF1-213ENST00000595897 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.43■■□□□ 1.18
ARHGEF1-213ENST00000595897 SYNMO15061 1565 aa22.42■■□□□ 1.18
ARHGEF1-213ENST00000595897 EFCAB2Q5VUJ9 269 aa22.42■■□□□ 1.18
ARHGEF1-213ENST00000595897 CGNL1Q0VF96 1302 aa22.41■■□□□ 1.18
ARHGEF1-213ENST00000595897 NPC1L1Q9UHC9 1359 aa22.41■■□□□ 1.18
ARHGEF1-213ENST00000595897 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
ARHGEF1-213ENST00000595897 STAC3Q96MF2 364 aa22.41■■□□□ 1.18
ARHGEF1-213ENST00000595897 DMRT2Q9Y5R5 561 aa22.41■■□□□ 1.18
ARHGEF1-213ENST00000595897 CENPJQ9HC77 1338 aaPredicted RBP22.4■■□□□ 1.18
ARHGEF1-213ENST00000595897 COG6Q9Y2V7 657 aa22.4■■□□□ 1.18
ARHGEF1-213ENST00000595897 CLUAP1Q96AJ1 413 aa22.39■■□□□ 1.17
ARHGEF1-213ENST00000595897 MADDQ8WXG6 1647 aa22.39■■□□□ 1.17
ARHGEF1-213ENST00000595897 PDE3AQ14432 1141 aa22.38■■□□□ 1.17
ARHGEF1-213ENST00000595897 PANK1Q8TE04 598 aa22.38■■□□□ 1.17
ARHGEF1-213ENST00000595897 MAPK8IP3Q9UPT6 1336 aa22.37■■□□□ 1.17
ARHGEF1-213ENST00000595897 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
ARHGEF1-213ENST00000595897 NEUROD2Q15784 382 aa22.36■■□□□ 1.17
ARHGEF1-213ENST00000595897 NGEFQ8N5V2 710 aa22.36■■□□□ 1.17
ARHGEF1-213ENST00000595897 BECN1Q14457 450 aa22.36■■□□□ 1.17
ARHGEF1-213ENST00000595897 IQGAP1P46940 1657 aa22.36■■□□□ 1.17
ARHGEF1-213ENST00000595897 SPAG9O60271 1321 aaKnown RBP22.36■■□□□ 1.17
ARHGEF1-213ENST00000595897 ABCC2Q92887 1545 aa22.36■■□□□ 1.17
ARHGEF1-213ENST00000595897 SLC24A1O60721 1099 aa22.33■■□□□ 1.17
ARHGEF1-213ENST00000595897 SEC24BO95487 1268 aa22.33■■□□□ 1.17
ARHGEF1-213ENST00000595897 CFAP70Q5T0N1 1121 aa22.33■■□□□ 1.17
ARHGEF1-213ENST00000595897 WWC1Q8IX03 1113 aa22.33■■□□□ 1.17
ARHGEF1-213ENST00000595897 SLKQ9H2G2 1235 aaPredicted RBP22.33■■□□□ 1.16
ARHGEF1-213ENST00000595897 CARD14Q9BXL6 1004 aa22.32■■□□□ 1.16
ARHGEF1-213ENST00000595897 TRAPPC8Q9Y2L5 1435 aa22.32■■□□□ 1.16
ARHGEF1-213ENST00000595897 AFAP1Q8N556 730 aa22.32■■□□□ 1.16
ARHGEF1-213ENST00000595897 USP19O94966 1318 aa22.32■■□□□ 1.16
ARHGEF1-213ENST00000595897 PLCH2O75038 1416 aa22.32■■□□□ 1.16
ARHGEF1-213ENST00000595897 TNNT2P45379 298 aaPredicted RBP22.31■■□□□ 1.16
ARHGEF1-213ENST00000595897 UPF2Q9HAU5 1272 aaKnown RBP22.3■■□□□ 1.16
ARHGEF1-213ENST00000595897 NINLQ9Y2I6 1382 aa22.29■■□□□ 1.16
ARHGEF1-213ENST00000595897 RRP7AQ9Y3A4 280 aaKnown RBP22.29■■□□□ 1.16
ARHGEF1-213ENST00000595897 TRPM2O94759 1503 aa22.29■■□□□ 1.16
ARHGEF1-213ENST00000595897 PMFBP1Q8TBY8 1022 aa22.27■■□□□ 1.16
ARHGEF1-213ENST00000595897 PTPRTO14522 1441 aa22.26■■□□□ 1.15
ARHGEF1-213ENST00000595897 KANK1Q14678 1352 aa22.26■■□□□ 1.15
ARHGEF1-213ENST00000595897 MORC1Q86VD1 984 aa22.26■■□□□ 1.15
ARHGEF1-213ENST00000595897 KDM5AP29375 1690 aaKnown RBP22.25■■□□□ 1.15
ARHGEF1-213ENST00000595897 MYOM1P52179 1685 aa22.25■■□□□ 1.15
ARHGEF1-213ENST00000595897 POGKQ9P215 609 aa22.25■■□□□ 1.15
ARHGEF1-213ENST00000595897 SPHKAPQ2M3C7 1700 aa22.25■■□□□ 1.15
ARHGEF1-213ENST00000595897 BCL2L13Q9BXK5 485 aa22.25■■□□□ 1.15
ARHGEF1-213ENST00000595897 EIF5BO60841 1220 aaKnown RBP22.24■■□□□ 1.15
ARHGEF1-213ENST00000595897 RARSP54136 660 aaKnown RBP22.24■■□□□ 1.15
ARHGEF1-213ENST00000595897 ADGRF5Q8IZF2 1346 aa22.24■■□□□ 1.15
ARHGEF1-213ENST00000595897 KIF3BO15066 747 aa22.23■■□□□ 1.15
ARHGEF1-213ENST00000595897 ERVK-7P63135 1459 aa22.23■■□□□ 1.15
ARHGEF1-213ENST00000595897 CLTCL1P53675 1640 aa22.23■■□□□ 1.15
ARHGEF1-213ENST00000595897 POLR3AO14802 1390 aaPredicted RBP22.23■■□□□ 1.15
ARHGEF1-213ENST00000595897 TCP11L2Q8N4U5 519 aa22.22■■□□□ 1.15
ARHGEF1-213ENST00000595897 RUNDC1Q96C34 613 aa22.22■■□□□ 1.15
ARHGEF1-213ENST00000595897 PCDHB15Q9Y5E8 787 aa22.21■■□□□ 1.15
ARHGEF1-213ENST00000595897 ABCC1P33527 1531 aa22.21■■□□□ 1.15
ARHGEF1-213ENST00000595897 RLBP1P12271 317 aa22.2■■□□□ 1.14
ARHGEF1-213ENST00000595897 TNNQ9UQP3 1299 aa22.19■■□□□ 1.14
ARHGEF1-213ENST00000595897 CEP152O94986 1710 aa22.19■■□□□ 1.14
ARHGEF1-213ENST00000595897 AAMPQ13685 434 aa22.19■■□□□ 1.14
ARHGEF1-213ENST00000595897 PDZRN3Q9UPQ7 1066 aa22.19■■□□□ 1.14
ARHGEF1-213ENST00000595897 RWDD1Q9H446 243 aaPredicted RBP22.18■■□□□ 1.14
ARHGEF1-213ENST00000595897 FAM43AQ8N2R8 423 aa22.17■■□□□ 1.14
ARHGEF1-213ENST00000595897 CHGAP10645 457 aaKnown RBP22.17■■□□□ 1.14
ARHGEF1-213ENST00000595897 RTEL1-TNFRSF6BF6WH68 1400 aa22.16■■□□□ 1.14
ARHGEF1-213ENST00000595897 TBC1D32Q96NH3 1257 aa22.16■■□□□ 1.14
ARHGEF1-213ENST00000595897 NSD3Q9BZ95 1437 aa22.16■■□□□ 1.14
ARHGEF1-213ENST00000595897 SLC12A5Q9H2X9 1139 aa22.16■■□□□ 1.14
ARHGEF1-213ENST00000595897 WDR63Q8IWG1 891 aa22.15■■□□□ 1.14
ARHGEF1-213ENST00000595897 TRAK1Q9UPV9 953 aa22.15■■□□□ 1.14
ARHGEF1-213ENST00000595897 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.14
ARHGEF1-213ENST00000595897 SPRYD3Q8NCJ5 442 aa22.14■■□□□ 1.13
ARHGEF1-213ENST00000595897 TBC1D2Q9BYX2 928 aa22.14■■□□□ 1.13
ARHGEF1-213ENST00000595897 CFAP53Q96M91 514 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms