RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 MAP3K9P80192 1104 aa6.7□□□□□ -1.34
LINC00649-204ENST00000593977 DPY19L2Q6NUT2 758 aa6.7□□□□□ -1.34
LINC00649-204ENST00000593977 CCDC102AQ96A19 550 aa6.7□□□□□ -1.34
LINC00649-204ENST00000593977 GNPATO15228 680 aa6.69□□□□□ -1.34
LINC00649-204ENST00000593977 SEC24BO95487 1268 aa6.69□□□□□ -1.34
LINC00649-204ENST00000593977 HIC1Q14526 733 aa6.69□□□□□ -1.34
LINC00649-204ENST00000593977 LTBP4Q8N2S1 1624 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 MAP3K4Q9Y6R4 1608 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 YEATS2Q9ULM3 1422 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 CCDC88BA6NC98 1476 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 PLEKHG3A1L390 1219 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 G3V3G9 751 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 KIF3CO14782 793 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 FCHSD2O94868 740 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 FLIIQ13045 1269 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 PARP9Q8IXQ6 854 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 SLAIN1Q8ND83 568 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 TMEM121BQ9BXQ6 578 aaPredicted RBP6.68□□□□□ -1.34
LINC00649-204ENST00000593977 GOPCQ9HD26 462 aa6.68□□□□□ -1.34
LINC00649-204ENST00000593977 EPRSP07814 1512 aaKnown RBP6.67□□□□□ -1.34
LINC00649-204ENST00000593977 C2orf72A6NCS6 295 aa6.67□□□□□ -1.34
LINC00649-204ENST00000593977 EIF5BO60841 1220 aaKnown RBP6.67□□□□□ -1.34
LINC00649-204ENST00000593977 OSBPP22059 807 aa6.67□□□□□ -1.34
LINC00649-204ENST00000593977 PTGER2P43116 358 aa6.67□□□□□ -1.34
LINC00649-204ENST00000593977 KCTD17Q8N5Z5 321 aa6.67□□□□□ -1.34
LINC00649-204ENST00000593977 PDCD7Q8N8D1 485 aaKnown RBP6.67□□□□□ -1.34
LINC00649-204ENST00000593977 BOLA1Q9Y3E2 137 aa6.67□□□□□ -1.34
LINC00649-204ENST00000593977 ABCC2Q92887 1545 aa6.66□□□□□ -1.34
LINC00649-204ENST00000593977 KIAA0586Q9BVV6 1533 aa6.66□□□□□ -1.34
LINC00649-204ENST00000593977 MADDQ8WXG6 1647 aa6.66□□□□□ -1.34
LINC00649-204ENST00000593977 UBAP1LF5GYI3 381 aa6.66□□□□□ -1.34
LINC00649-204ENST00000593977 HSPA1LP34931 641 aa6.66□□□□□ -1.34
LINC00649-204ENST00000593977 ABCA5Q8WWZ7 1642 aa6.65□□□□□ -1.34
LINC00649-204ENST00000593977 OCEL1Q9H607 264 aa6.65□□□□□ -1.34
LINC00649-204ENST00000593977 RGS17Q9UGC6 210 aaPredicted RBP6.65□□□□□ -1.34
LINC00649-204ENST00000593977 COLQQ9Y215 455 aaPredicted RBP6.65□□□□□ -1.34
LINC00649-204ENST00000593977 FHAD1B1AJZ9 1412 aa6.65□□□□□ -1.35
LINC00649-204ENST00000593977 ADAMTS12P58397 1594 aa6.65□□□□□ -1.35
LINC00649-204ENST00000593977 RAD21O60216 631 aa6.64□□□□□ -1.35
LINC00649-204ENST00000593977 IRX5P78411 483 aaPredicted RBP6.64□□□□□ -1.35
LINC00649-204ENST00000593977 TTLL12Q14166 644 aaPredicted RBP6.64□□□□□ -1.35
LINC00649-204ENST00000593977 IER5LQ5T953 404 aa6.64□□□□□ -1.35
LINC00649-204ENST00000593977 PTPRTO14522 1441 aa6.64□□□□□ -1.35
LINC00649-204ENST00000593977 BCORL1Q5H9F3 1711 aa6.64□□□□□ -1.35
LINC00649-204ENST00000593977 TBC1D12O60347 775 aa6.63□□□□□ -1.35
LINC00649-204ENST00000593977 STRCQ7RTU9 1775 aa6.63□□□□□ -1.35
LINC00649-204ENST00000593977 RGS22Q8NE09 1264 aa6.63□□□□□ -1.35
LINC00649-204ENST00000593977 OXER1Q8TDS5 423 aa6.63□□□□□ -1.35
LINC00649-204ENST00000593977 ABCA10Q8WWZ4 1543 aa6.63□□□□□ -1.35
LINC00649-204ENST00000593977 CCDC82Q8N4S0 544 aa6.62□□□□□ -1.35
LINC00649-204ENST00000593977 UPF1Q92900 1129 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC00649-204ENST00000593977 CUX1P39880 1505 aa6.61□□□□□ -1.35
LINC00649-204ENST00000593977 PTPRGP23470 1445 aa6.61□□□□□ -1.35
LINC00649-204ENST00000593977 FECHP22830 423 aa6.61□□□□□ -1.35
LINC00649-204ENST00000593977 PTGDRQ13258 359 aa6.61□□□□□ -1.35
LINC00649-204ENST00000593977 IFFO2Q5TF58 517 aa6.61□□□□□ -1.35
LINC00649-204ENST00000593977 DDX12PQ92771 950 aa6.61□□□□□ -1.35
LINC00649-204ENST00000593977 L3MBTL3Q96JM7 780 aaPredicted RBP6.61□□□□□ -1.35
LINC00649-204ENST00000593977 MAGI3Q5TCQ9 1506 aa6.6□□□□□ -1.35
LINC00649-204ENST00000593977 ARID4BQ4LE39 1312 aaPredicted RBP6.6□□□□□ -1.35
LINC00649-204ENST00000593977 MTMR7Q9Y216 660 aa6.6□□□□□ -1.35
LINC00649-204ENST00000593977 RIMS1Q86UR5 1692 aaKnown RBP6.59□□□□□ -1.35
LINC00649-204ENST00000593977 SNPHO15079 494 aa6.59□□□□□ -1.35
LINC00649-204ENST00000593977 ONECUT3O60422 494 aaPredicted RBP6.59□□□□□ -1.35
LINC00649-204ENST00000593977 GIGYF2Q6Y7W6 1299 aaKnown RBP6.59□□□□□ -1.35
LINC00649-204ENST00000593977 PCMTD1Q96MG8 357 aaPredicted RBP6.59□□□□□ -1.35
LINC00649-204ENST00000593977 TRAIPQ9BWF2 469 aa6.59□□□□□ -1.35
LINC00649-204ENST00000593977 EVI5O60447 810 aa6.58□□□□□ -1.36
LINC00649-204ENST00000593977 PLCG2P16885 1265 aa6.58□□□□□ -1.36
LINC00649-204ENST00000593977 ARAP3Q8WWN8 1544 aa6.58□□□□□ -1.36
LINC00649-204ENST00000593977 CD109Q6YHK3 1445 aa6.58□□□□□ -1.36
LINC00649-204ENST00000593977 RUSC2Q8N2Y8 1516 aa6.57□□□□□ -1.36
LINC00649-204ENST00000593977 A6NJR5 290 aa6.57□□□□□ -1.36
LINC00649-204ENST00000593977 MS4A1P11836 297 aa6.57□□□□□ -1.36
LINC00649-204ENST00000593977 ZNF428Q96B54 188 aa6.57□□□□□ -1.36
LINC00649-204ENST00000593977 UHRF1BP1LA0JNW5 1464 aa6.57□□□□□ -1.36
LINC00649-204ENST00000593977 CLCN1P35523 988 aa6.56□□□□□ -1.36
LINC00649-204ENST00000593977 SH3D19Q5HYK7 790 aa6.56□□□□□ -1.36
LINC00649-204ENST00000593977 AEBP1Q8IUX7 1158 aa6.56□□□□□ -1.36
LINC00649-204ENST00000593977 MARVELD3Q96A59 401 aa6.56□□□□□ -1.36
LINC00649-204ENST00000593977 KDM5BQ9UGL1 1544 aa6.55□□□□□ -1.36
LINC00649-204ENST00000593977 CDK11BP21127 795 aaKnown RBP6.55□□□□□ -1.36
LINC00649-204ENST00000593977 PRIM1P49642 420 aaKnown RBP6.55□□□□□ -1.36
LINC00649-204ENST00000593977 FOXD4L5Q5VV16 416 aaPredicted RBP6.55□□□□□ -1.36
LINC00649-204ENST00000593977 POTEAQ6S8J7 498 aa6.55□□□□□ -1.36
LINC00649-204ENST00000593977 TMEM92Q6UXU6 159 aa6.55□□□□□ -1.36
LINC00649-204ENST00000593977 PTCD2Q8WV60 388 aaKnown RBP6.55□□□□□ -1.36
LINC00649-204ENST00000593977 FOXD4L4Q8WXT5 416 aaPredicted RBP6.55□□□□□ -1.36
LINC00649-204ENST00000593977 ANO8Q9HCE9 1232 aaPredicted RBP6.55□□□□□ -1.36
LINC00649-204ENST00000593977 CDK11AQ9UQ88 783 aaPredicted RBP6.55□□□□□ -1.36
LINC00649-204ENST00000593977 CUL7Q14999 1698 aa6.55□□□□□ -1.36
LINC00649-204ENST00000593977 RAPGEF3O95398 923 aa6.54□□□□□ -1.36
LINC00649-204ENST00000593977 HMGB1P09429 215 aaKnown RBP6.54□□□□□ -1.36
LINC00649-204ENST00000593977 RBM25P49756 843 aaKnown RBP6.54□□□□□ -1.36
LINC00649-204ENST00000593977 EPAS1Q99814 870 aa6.54□□□□□ -1.36
LINC00649-204ENST00000593977 TMUB1Q9BVT8 246 aa6.54□□□□□ -1.36
LINC00649-204ENST00000593977 CFAP43Q8NDM7 1665 aa6.53□□□□□ -1.36
LINC00649-204ENST00000593977 TRAK2O60296 914 aa6.53□□□□□ -1.36
LINC00649-204ENST00000593977 HSP90B1P14625 803 aaKnown RBP6.53□□□□□ -1.36
LINC00649-204ENST00000593977 TMCO4Q5TGY1 634 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms