RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 ABCC5O15440 1437 aa17.23■□□□□ 0.35
RANBP3-230ENST00000593025 ZFYVE9O95405 1425 aa17.23■□□□□ 0.35
RANBP3-230ENST00000593025 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
RANBP3-230ENST00000593025 SPATA31A6Q5VVP1 1343 aa17.21■□□□□ 0.35
RANBP3-230ENST00000593025 CDK12Q9NYV4 1490 aaPredicted RBP17.21■□□□□ 0.35
RANBP3-230ENST00000593025 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.21■□□□□ 0.35
RANBP3-230ENST00000593025 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
RANBP3-230ENST00000593025 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
RANBP3-230ENST00000593025 ZNF772Q68DY9 489 aaPredicted RBP17.19■□□□□ 0.34
RANBP3-230ENST00000593025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
RANBP3-230ENST00000593025 RRP7BPQ9NSQ0 103 aa17.19■□□□□ 0.34
RANBP3-230ENST00000593025 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
RANBP3-230ENST00000593025 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
RANBP3-230ENST00000593025 NCOA3Q9Y6Q9 1424 aa17.16■□□□□ 0.34
RANBP3-230ENST00000593025 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
RANBP3-230ENST00000593025 PTPN23Q9H3S7 1636 aa17.16■□□□□ 0.34
RANBP3-230ENST00000593025 DAPK1P53355 1430 aa17.15■□□□□ 0.34
RANBP3-230ENST00000593025 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
RANBP3-230ENST00000593025 KANK1Q14678 1352 aa17.15■□□□□ 0.34
RANBP3-230ENST00000593025 ADAMTS13Q76LX8 1427 aa17.14■□□□□ 0.33
RANBP3-230ENST00000593025 MEX3CQ5U5Q3 659 aaKnown RBP17.14■□□□□ 0.33
RANBP3-230ENST00000593025 RGS12O14924 1447 aa17.13■□□□□ 0.33
RANBP3-230ENST00000593025 RXRBP28702 533 aa17.13■□□□□ 0.33
RANBP3-230ENST00000593025 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
RANBP3-230ENST00000593025 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
RANBP3-230ENST00000593025 SLC52A1Q9NWF4 448 aa17.1■□□□□ 0.33
RANBP3-230ENST00000593025 AFF2P51816 1311 aa17.1■□□□□ 0.33
RANBP3-230ENST00000593025 RPRD2Q5VT52 1461 aaKnown RBP17.1■□□□□ 0.33
RANBP3-230ENST00000593025 BRINP3Q76B58 766 aa17.09■□□□□ 0.33
RANBP3-230ENST00000593025 BCANQ96GW7 911 aa17.09■□□□□ 0.33
RANBP3-230ENST00000593025 TBX22Q9Y458 520 aa17.09■□□□□ 0.33
RANBP3-230ENST00000593025 ASXL1Q8IXJ9 1541 aa17.09■□□□□ 0.33
RANBP3-230ENST00000593025 PTPRUQ92729 1446 aa17.07■□□□□ 0.32
RANBP3-230ENST00000593025 SETD5Q9C0A6 1442 aa17.07■□□□□ 0.32
RANBP3-230ENST00000593025 NUTM2BA6NNL0 878 aaPredicted RBP17.06■□□□□ 0.32
RANBP3-230ENST00000593025 NUTM2EB1AL46 878 aaPredicted RBP17.06■□□□□ 0.32
RANBP3-230ENST00000593025 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
RANBP3-230ENST00000593025 NUTM2AQ8IVF1 878 aaPredicted RBP17.06■□□□□ 0.32
RANBP3-230ENST00000593025 C19orf44Q9H6X5 657 aa17.06■□□□□ 0.32
RANBP3-230ENST00000593025 XRN1Q8IZH2 1706 aaKnown RBP17.05■□□□□ 0.32
RANBP3-230ENST00000593025 EP400Q96L91 3159 aa17.05■□□□□ 0.32
RANBP3-230ENST00000593025 ADGRL2O95490 1459 aa17.05■□□□□ 0.32
RANBP3-230ENST00000593025 ANKRD30AQ9BXX3 1397 aa17.04■□□□□ 0.32
RANBP3-230ENST00000593025 UNC13BO14795 1591 aa17.04■□□□□ 0.32
RANBP3-230ENST00000593025 MST1RQ04912 1400 aa17.04■□□□□ 0.32
RANBP3-230ENST00000593025 PIK3R4Q99570 1358 aa17.03■□□□□ 0.32
RANBP3-230ENST00000593025 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
RANBP3-230ENST00000593025 C14orf37Q86TY3 774 aa17.03■□□□□ 0.32
RANBP3-230ENST00000593025 CHIC2Q9UKJ5 165 aa17.03■□□□□ 0.32
RANBP3-230ENST00000593025 DCCP43146 1447 aa17.03■□□□□ 0.32
RANBP3-230ENST00000593025 TRPM2O94759 1503 aa17.02■□□□□ 0.32
RANBP3-230ENST00000593025 ATF3P18847 181 aa17.02■□□□□ 0.32
RANBP3-230ENST00000593025 E9PCH4 1651 aa17.01■□□□□ 0.31
RANBP3-230ENST00000593025 PPP1R15AO75807 674 aaPredicted RBP17.01■□□□□ 0.31
RANBP3-230ENST00000593025 SETBP1Q9Y6X0 1596 aa17.01■□□□□ 0.31
RANBP3-230ENST00000593025 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
RANBP3-230ENST00000593025 PNPLA6Q8IY17 1366 aa17■□□□□ 0.31
RANBP3-230ENST00000593025 RBM6P78332 1123 aaKnown RBP16.99■□□□□ 0.31
RANBP3-230ENST00000593025 C8orf37Q96NL8 207 aa16.97■□□□□ 0.31
RANBP3-230ENST00000593025 QTRT2Q9H974 415 aaKnown RBP16.97■□□□□ 0.31
RANBP3-230ENST00000593025 AMOTL2Q9Y2J4 779 aa16.97■□□□□ 0.31
RANBP3-230ENST00000593025 LAMC1P11047 1609 aa16.96■□□□□ 0.31
RANBP3-230ENST00000593025 NALCNQ8IZF0 1738 aa16.96■□□□□ 0.31
RANBP3-230ENST00000593025 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
RANBP3-230ENST00000593025 ANKRD50Q9ULJ7 1429 aa16.96■□□□□ 0.3
RANBP3-230ENST00000593025 HDGFP51858 240 aaKnown RBP16.95■□□□□ 0.3
RANBP3-230ENST00000593025 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.95■□□□□ 0.3
RANBP3-230ENST00000593025 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
RANBP3-230ENST00000593025 LRRC59Q96AG4 307 aaKnown RBP16.92■□□□□ 0.3
RANBP3-230ENST00000593025 ADGRL3Q9HAR2 1447 aa16.91■□□□□ 0.3
RANBP3-230ENST00000593025 IQGAP3Q86VI3 1631 aa16.91■□□□□ 0.3
RANBP3-230ENST00000593025 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
RANBP3-230ENST00000593025 METP08581 1390 aa16.89■□□□□ 0.3
RANBP3-230ENST00000593025 ATRNO75882 1429 aa16.89■□□□□ 0.29
RANBP3-230ENST00000593025 ADAMTS2O95450 1211 aa16.88■□□□□ 0.29
RANBP3-230ENST00000593025 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
RANBP3-230ENST00000593025 C1orf167Q5SNV9 1468 aa16.86■□□□□ 0.29
RANBP3-230ENST00000593025 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
RANBP3-230ENST00000593025 NGLY1Q96IV0 654 aa16.86■□□□□ 0.29
RANBP3-230ENST00000593025 ZRANB1Q9UGI0 708 aa16.85■□□□□ 0.29
RANBP3-230ENST00000593025 FNBP4Q8N3X1 1017 aaPredicted RBP16.84■□□□□ 0.29
RANBP3-230ENST00000593025 SOS2Q07890 1332 aaPredicted RBP16.83■□□□□ 0.28
RANBP3-230ENST00000593025 PTCH1Q13635 1447 aa16.83■□□□□ 0.28
RANBP3-230ENST00000593025 BCL9LQ86UU0 1499 aa16.83■□□□□ 0.28
RANBP3-230ENST00000593025 USP21Q9UK80 565 aa16.83■□□□□ 0.28
RANBP3-230ENST00000593025 MARF1Q9Y4F3 1742 aaKnown RBP16.82■□□□□ 0.28
RANBP3-230ENST00000593025 MYOM2P54296 1465 aa16.82■□□□□ 0.28
RANBP3-230ENST00000593025 TRPC5Q9UL62 973 aaPredicted RBP16.81■□□□□ 0.28
RANBP3-230ENST00000593025 SPHKAPQ2M3C7 1700 aa16.81■□□□□ 0.28
RANBP3-230ENST00000593025 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
RANBP3-230ENST00000593025 LRP5O75197 1615 aa16.79■□□□□ 0.28
RANBP3-230ENST00000593025 ORAI2Q96SN7 254 aa16.78■□□□□ 0.28
RANBP3-230ENST00000593025 GLI3P10071 1580 aa16.77■□□□□ 0.28
RANBP3-230ENST00000593025 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.77■□□□□ 0.28
RANBP3-230ENST00000593025 ROBO2Q9HCK4 1378 aa16.76■□□□□ 0.27
RANBP3-230ENST00000593025 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
RANBP3-230ENST00000593025 PXDNQ92626 1479 aa16.75■□□□□ 0.27
RANBP3-230ENST00000593025 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
RANBP3-230ENST00000593025 FAM50AQ14320 339 aaKnown RBP16.75■□□□□ 0.27
RANBP3-230ENST00000593025 CCDC125Q86Z20 511 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms