RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 GPRASP1Q5JY77 1395 aa25.99■■□□□ 1.75
HDAC5-212ENST00000593013 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
HDAC5-212ENST00000593013 SLC52A1Q9NWF4 448 aa25.98■■□□□ 1.75
HDAC5-212ENST00000593013 NEURL4Q96JN8 1562 aa25.97■■□□□ 1.75
HDAC5-212ENST00000593013 IDI1Q13907 227 aa25.97■■□□□ 1.75
HDAC5-212ENST00000593013 TNRQ92752 1358 aa25.96■■□□□ 1.75
HDAC5-212ENST00000593013 CARD11Q9BXL7 1154 aa25.95■■□□□ 1.74
HDAC5-212ENST00000593013 KDM2AQ9Y2K7 1162 aa25.94■■□□□ 1.74
HDAC5-212ENST00000593013 ROCK2O75116 1388 aaKnown RBP25.93■■□□□ 1.74
HDAC5-212ENST00000593013 KIF1BO60333 1816 aa25.93■■□□□ 1.74
HDAC5-212ENST00000593013 SETD1BQ9UPS6 1966 aaKnown RBP25.9■■□□□ 1.74
HDAC5-212ENST00000593013 ADGRB3O60242 1522 aa25.89■■□□□ 1.73
HDAC5-212ENST00000593013 TMEM131LA2VDJ0 1609 aa25.87■■□□□ 1.73
HDAC5-212ENST00000593013 PRKRIP1Q9H875 184 aaPredicted RBP25.87■■□□□ 1.73
HDAC5-212ENST00000593013 NLRP1Q9C000 1473 aa25.87■■□□□ 1.73
HDAC5-212ENST00000593013 MYO3AQ8NEV4 1616 aa25.85■■□□□ 1.73
HDAC5-212ENST00000593013 RGL3Q3MIN7 710 aa25.85■■□□□ 1.73
HDAC5-212ENST00000593013 MYO5BQ9ULV0 1848 aa25.84■■□□□ 1.73
HDAC5-212ENST00000593013 STAC3Q96MF2 364 aa25.83■■□□□ 1.73
HDAC5-212ENST00000593013 KDM5AP29375 1690 aaKnown RBP25.82■■□□□ 1.72
HDAC5-212ENST00000593013 ST20-MTHFSA0A0A6YYL1 179 aa25.81■■□□□ 1.72
HDAC5-212ENST00000593013 CHGAP10645 457 aaKnown RBP25.81■■□□□ 1.72
HDAC5-212ENST00000593013 A2ML1A8K2U0 1454 aa25.81■■□□□ 1.72
HDAC5-212ENST00000593013 UBR1Q8IWV7 1749 aa25.8■■□□□ 1.72
HDAC5-212ENST00000593013 KIAA1210Q9ULL0 1709 aa25.79■■□□□ 1.72
HDAC5-212ENST00000593013 AEBP2Q6ZN18 517 aaPredicted RBP25.79■■□□□ 1.72
HDAC5-212ENST00000593013 IQGAP1P46940 1657 aa25.79■■□□□ 1.72
HDAC5-212ENST00000593013 ZNF142P52746 1687 aaPredicted RBP25.78■■□□□ 1.72
HDAC5-212ENST00000593013 IFT172Q9UG01 1749 aa25.76■■□□□ 1.71
HDAC5-212ENST00000593013 NBPF1Q3BBV0 1214 aa25.76■■□□□ 1.71
HDAC5-212ENST00000593013 STAG3Q9UJ98 1225 aa25.76■■□□□ 1.71
HDAC5-212ENST00000593013 CEP170BQ9Y4F5 1589 aaPredicted RBP25.75■■□□□ 1.71
HDAC5-212ENST00000593013 RPGRIP1LQ68CZ1 1315 aa25.74■■□□□ 1.71
HDAC5-212ENST00000593013 PPLO60437 1756 aa25.73■■□□□ 1.71
HDAC5-212ENST00000593013 NEXMIFQ5QGS0 1516 aa25.73■■□□□ 1.71
HDAC5-212ENST00000593013 MYOM2P54296 1465 aa25.73■■□□□ 1.71
HDAC5-212ENST00000593013 LMTK3Q96Q04 1460 aa25.72■■□□□ 1.71
HDAC5-212ENST00000593013 ZFYVE9O95405 1425 aa25.69■■□□□ 1.7
HDAC5-212ENST00000593013 TMEM2Q9UHN6 1383 aa25.68■■□□□ 1.7
HDAC5-212ENST00000593013 THEMISQ8N1K5 641 aaPredicted RBP25.67■■□□□ 1.7
HDAC5-212ENST00000593013 CCDC184Q52MB2 194 aa25.66■■□□□ 1.7
HDAC5-212ENST00000593013 TESK2Q96S53 571 aa25.66■■□□□ 1.7
HDAC5-212ENST00000593013 KTN1Q86UP2 1357 aaKnown RBP25.66■■□□□ 1.7
HDAC5-212ENST00000593013 RIMS2Q9UQ26 1411 aa25.66■■□□□ 1.7
HDAC5-212ENST00000593013 ARHGAP23Q9P227 1491 aa25.66■■□□□ 1.7
HDAC5-212ENST00000593013 SLIT1O75093 1534 aa25.66■■□□□ 1.7
HDAC5-212ENST00000593013 NRXN1Q9ULB1 1477 aa25.65■■□□□ 1.7
HDAC5-212ENST00000593013 ADGRF5Q8IZF2 1346 aa25.65■■□□□ 1.7
HDAC5-212ENST00000593013 SCAF11Q99590 1463 aaKnown RBP25.63■■□□□ 1.69
HDAC5-212ENST00000593013 VGFO15240 615 aaPredicted RBP25.63■■□□□ 1.69
HDAC5-212ENST00000593013 POLR3GLQ9BT43 218 aa25.63■■□□□ 1.69
HDAC5-212ENST00000593013 MRS2Q9HD23 443 aa25.63■■□□□ 1.69
HDAC5-212ENST00000593013 NUTM2DQ5VT03 806 aaPredicted RBP25.62■■□□□ 1.69
HDAC5-212ENST00000593013 DISP3Q9P2K9 1392 aa25.6■■□□□ 1.69
HDAC5-212ENST00000593013 SUPT16HQ9Y5B9 1047 aaKnown RBP25.6■■□□□ 1.69
HDAC5-212ENST00000593013 LTKP29376 864 aa25.59■■□□□ 1.69
HDAC5-212ENST00000593013 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.59■■□□□ 1.69
HDAC5-212ENST00000593013 PIK3C2GO75747 1445 aa25.59■■□□□ 1.69
HDAC5-212ENST00000593013 HNRNPUQ00839 825 aaKnown RBP eCLIP25.58■■□□□ 1.69
HDAC5-212ENST00000593013 HDGFP51858 240 aaKnown RBP25.57■■□□□ 1.68
HDAC5-212ENST00000593013 HSPA2P54652 639 aa25.56■■□□□ 1.68
HDAC5-212ENST00000593013 TXNDC2Q86VQ3 553 aa25.54■■□□□ 1.68
HDAC5-212ENST00000593013 TMF1P82094 1093 aa25.54■■□□□ 1.68
HDAC5-212ENST00000593013 RALBP1Q15311 655 aa25.53■■□□□ 1.68
HDAC5-212ENST00000593013 EID1Q9Y6B2 187 aa25.53■■□□□ 1.68
HDAC5-212ENST00000593013 SETBP1Q9Y6X0 1596 aa25.53■■□□□ 1.68
HDAC5-212ENST00000593013 EIF3AQ14152 1382 aaKnown RBP25.51■■□□□ 1.67
HDAC5-212ENST00000593013 C14orf93Q9H972 538 aaKnown RBP25.5■■□□□ 1.67
HDAC5-212ENST00000593013 PARD3Q8TEW0 1356 aa25.5■■□□□ 1.67
HDAC5-212ENST00000593013 PLEKHG1Q9ULL1 1385 aa25.5■■□□□ 1.67
HDAC5-212ENST00000593013 NRXN3Q9Y4C0 1643 aa25.49■■□□□ 1.67
HDAC5-212ENST00000593013 CFAP70Q5T0N1 1121 aa25.49■■□□□ 1.67
HDAC5-212ENST00000593013 ANKLE2Q86XL3 938 aa25.49■■□□□ 1.67
HDAC5-212ENST00000593013 ZBED9Q6R2W3 1325 aa25.48■■□□□ 1.67
HDAC5-212ENST00000593013 BRD4O60885 1362 aaPredicted RBP25.48■■□□□ 1.67
HDAC5-212ENST00000593013 PER1O15534 1290 aaPredicted RBP25.48■■□□□ 1.67
HDAC5-212ENST00000593013 MYBBP1AQ9BQG0 1328 aaKnown RBP25.48■■□□□ 1.67
HDAC5-212ENST00000593013 FAM9BQ8IZU0 186 aa25.47■■□□□ 1.67
HDAC5-212ENST00000593013 STRCQ7RTU9 1775 aa25.47■■□□□ 1.67
HDAC5-212ENST00000593013 ALKQ9UM73 1620 aa25.46■■□□□ 1.67
HDAC5-212ENST00000593013 SENP3Q9H4L4 574 aaPredicted RBP25.45■■□□□ 1.66
HDAC5-212ENST00000593013 MYOM1P52179 1685 aa25.45■■□□□ 1.66
HDAC5-212ENST00000593013 SETD1AO15047 1707 aaKnown RBP25.44■■□□□ 1.66
HDAC5-212ENST00000593013 ADAMTS13Q76LX8 1427 aa25.43■■□□□ 1.66
HDAC5-212ENST00000593013 MED14O60244 1454 aa25.43■■□□□ 1.66
HDAC5-212ENST00000593013 ADGRB1O14514 1584 aa25.42■■□□□ 1.66
HDAC5-212ENST00000593013 CDCA8Q53HL2 280 aa25.42■■□□□ 1.66
HDAC5-212ENST00000593013 LRPPRCP42704 1394 aaKnown RBP25.41■■□□□ 1.66
HDAC5-212ENST00000593013 NCKAP5LQ9HCH0 1330 aa25.41■■□□□ 1.66
HDAC5-212ENST00000593013 ASXL1Q8IXJ9 1541 aa25.4■■□□□ 1.66
HDAC5-212ENST00000593013 SLC24A1O60721 1099 aa25.4■■□□□ 1.66
HDAC5-212ENST00000593013 PNISRQ8TF01 805 aaKnown RBP25.4■■□□□ 1.66
HDAC5-212ENST00000593013 SBNO2Q9Y2G9 1366 aa25.39■■□□□ 1.66
HDAC5-212ENST00000593013 TMEM132EQ6IEE7 984 aa25.37■■□□□ 1.65
HDAC5-212ENST00000593013 NPHP4O75161 1426 aaPredicted RBP25.37■■□□□ 1.65
HDAC5-212ENST00000593013 BCANQ96GW7 911 aa25.37■■□□□ 1.65
HDAC5-212ENST00000593013 PANK3Q9H999 370 aa25.36■■□□□ 1.65
HDAC5-212ENST00000593013 NEFLP07196 543 aa25.35■■□□□ 1.65
HDAC5-212ENST00000593013 NLRP13Q86W25 1043 aa25.35■■□□□ 1.65
HDAC5-212ENST00000593013 TMC1Q8TDI8 760 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms