RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 CDK12Q9NYV4 1490 aaPredicted RBP16.1■□□□□ 0.17
SDF2-209ENST00000591903 AHDC1Q5TGY3 1603 aaPredicted RBP16.1■□□□□ 0.17
SDF2-209ENST00000591903 IDI1Q13907 227 aa16.1■□□□□ 0.17
SDF2-209ENST00000591903 TRIM52Q96A61 297 aa16.09■□□□□ 0.17
SDF2-209ENST00000591903 RXRBP28702 533 aa16.07■□□□□ 0.16
SDF2-209ENST00000591903 BCANQ96GW7 911 aa16.07■□□□□ 0.16
SDF2-209ENST00000591903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.16
SDF2-209ENST00000591903 NOS1P29475 1434 aa16.06■□□□□ 0.16
SDF2-209ENST00000591903 SLC52A1Q9NWF4 448 aa16.06■□□□□ 0.16
SDF2-209ENST00000591903 MYO5BQ9ULV0 1848 aa16.05■□□□□ 0.16
SDF2-209ENST00000591903 PLEKHG1Q9ULL1 1385 aa16.05■□□□□ 0.16
SDF2-209ENST00000591903 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.05■□□□□ 0.16
SDF2-209ENST00000591903 HDGFP51858 240 aaKnown RBP16.04■□□□□ 0.16
SDF2-209ENST00000591903 RRP7BPQ9NSQ0 103 aa16.04■□□□□ 0.16
SDF2-209ENST00000591903 CADPS2Q86UW7 1296 aa16.03■□□□□ 0.16
SDF2-209ENST00000591903 ZFYVE9O95405 1425 aa16.02■□□□□ 0.16
SDF2-209ENST00000591903 LOC105371045A0A1W2PR82 267 aa16.02■□□□□ 0.16
SDF2-209ENST00000591903 RPRD2Q5VT52 1461 aaKnown RBP16.02■□□□□ 0.15
SDF2-209ENST00000591903 ABCC5O15440 1437 aa16.02■□□□□ 0.15
SDF2-209ENST00000591903 GCC2Q8IWJ2 1684 aa16.02■□□□□ 0.15
SDF2-209ENST00000591903 DIP2AQ14689 1571 aa16.01■□□□□ 0.15
SDF2-209ENST00000591903 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
SDF2-209ENST00000591903 ATF3P18847 181 aa16■□□□□ 0.15
SDF2-209ENST00000591903 C14orf37Q86TY3 774 aa16■□□□□ 0.15
SDF2-209ENST00000591903 TBX22Q9Y458 520 aa16■□□□□ 0.15
SDF2-209ENST00000591903 VPS8Q8N3P4 1428 aa16■□□□□ 0.15
SDF2-209ENST00000591903 PPP1R15AO75807 674 aaPredicted RBP15.99■□□□□ 0.15
SDF2-209ENST00000591903 C19orf44Q9H6X5 657 aa15.99■□□□□ 0.15
SDF2-209ENST00000591903 PIK3R4Q99570 1358 aa15.99■□□□□ 0.15
SDF2-209ENST00000591903 TMEM131LA2VDJ0 1609 aa15.98■□□□□ 0.15
SDF2-209ENST00000591903 DAPK1P53355 1430 aa15.98■□□□□ 0.15
SDF2-209ENST00000591903 RIMS2Q9UQ26 1411 aa15.98■□□□□ 0.15
SDF2-209ENST00000591903 ANKRD30AQ9BXX3 1397 aa15.98■□□□□ 0.15
SDF2-209ENST00000591903 SRCAPQ6ZRS2 3230 aa15.96■□□□□ 0.15
SDF2-209ENST00000591903 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.96■□□□□ 0.15
SDF2-209ENST00000591903 AFF2P51816 1311 aa15.95■□□□□ 0.14
SDF2-209ENST00000591903 DCCP43146 1447 aa15.95■□□□□ 0.14
SDF2-209ENST00000591903 NHSL1Q5SYE7 1610 aa15.95■□□□□ 0.14
SDF2-209ENST00000591903 FOXD1Q16676 465 aa15.95■□□□□ 0.14
SDF2-209ENST00000591903 SETD5Q9C0A6 1442 aa15.94■□□□□ 0.14
SDF2-209ENST00000591903 NUTM2BA6NNL0 878 aaPredicted RBP15.94■□□□□ 0.14
SDF2-209ENST00000591903 NUTM2EB1AL46 878 aaPredicted RBP15.94■□□□□ 0.14
SDF2-209ENST00000591903 KANK4Q5T7N3 995 aaPredicted RBP15.94■□□□□ 0.14
SDF2-209ENST00000591903 NUTM2AQ8IVF1 878 aaPredicted RBP15.94■□□□□ 0.14
SDF2-209ENST00000591903 TRPM2O94759 1503 aa15.94■□□□□ 0.14
SDF2-209ENST00000591903 RGS12O14924 1447 aa15.94■□□□□ 0.14
SDF2-209ENST00000591903 RBM6P78332 1123 aaKnown RBP15.93■□□□□ 0.14
SDF2-209ENST00000591903 BRINP3Q76B58 766 aa15.93■□□□□ 0.14
SDF2-209ENST00000591903 ASXL1Q8IXJ9 1541 aa15.93■□□□□ 0.14
SDF2-209ENST00000591903 ADAMTS13Q76LX8 1427 aa15.92■□□□□ 0.14
SDF2-209ENST00000591903 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
SDF2-209ENST00000591903 QTRT2Q9H974 415 aaKnown RBP15.89■□□□□ 0.13
SDF2-209ENST00000591903 ADGRL2O95490 1459 aa15.89■□□□□ 0.13
SDF2-209ENST00000591903 ATAD2Q6PL18 1390 aa15.88■□□□□ 0.13
SDF2-209ENST00000591903 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
SDF2-209ENST00000591903 NGLY1Q96IV0 654 aa15.88■□□□□ 0.13
SDF2-209ENST00000591903 C8orf37Q96NL8 207 aa15.87■□□□□ 0.13
SDF2-209ENST00000591903 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
SDF2-209ENST00000591903 CHIC2Q9UKJ5 165 aa15.86■□□□□ 0.13
SDF2-209ENST00000591903 UNC13BO14795 1591 aa15.86■□□□□ 0.13
SDF2-209ENST00000591903 MST1RQ04912 1400 aa15.85■□□□□ 0.13
SDF2-209ENST00000591903 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
SDF2-209ENST00000591903 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
SDF2-209ENST00000591903 PNPLA6Q8IY17 1366 aa15.85■□□□□ 0.13
SDF2-209ENST00000591903 ANKRD50Q9ULJ7 1429 aa15.84■□□□□ 0.13
SDF2-209ENST00000591903 E9PCH4 1651 aa15.83■□□□□ 0.13
SDF2-209ENST00000591903 CHGAP10645 457 aaKnown RBP15.83■□□□□ 0.12
SDF2-209ENST00000591903 PTPRUQ92729 1446 aa15.83■□□□□ 0.12
SDF2-209ENST00000591903 LAMC1P11047 1609 aa15.81■□□□□ 0.12
SDF2-209ENST00000591903 IQGAP3Q86VI3 1631 aa15.8■□□□□ 0.12
SDF2-209ENST00000591903 SETBP1Q9Y6X0 1596 aa15.8■□□□□ 0.12
SDF2-209ENST00000591903 APLP2Q06481 763 aa15.8■□□□□ 0.12
SDF2-209ENST00000591903 CCDC125Q86Z20 511 aa15.8■□□□□ 0.12
SDF2-209ENST00000591903 NRXN3Q9Y4C0 1643 aa15.79■□□□□ 0.12
SDF2-209ENST00000591903 TRPC5Q9UL62 973 aaPredicted RBP15.79■□□□□ 0.12
SDF2-209ENST00000591903 EP400Q96L91 3159 aa15.79■□□□□ 0.12
SDF2-209ENST00000591903 ADGRL3Q9HAR2 1447 aa15.78■□□□□ 0.12
SDF2-209ENST00000591903 NALCNQ8IZF0 1738 aa15.78■□□□□ 0.12
SDF2-209ENST00000591903 PTCH1Q13635 1447 aa15.77■□□□□ 0.12
SDF2-209ENST00000591903 ADAMTS2O95450 1211 aa15.76■□□□□ 0.11
SDF2-209ENST00000591903 USP21Q9UK80 565 aa15.76■□□□□ 0.11
SDF2-209ENST00000591903 COL22A1Q8NFW1 1626 aaPredicted RBP15.75■□□□□ 0.11
SDF2-209ENST00000591903 ATRNO75882 1429 aa15.74■□□□□ 0.11
SDF2-209ENST00000591903 MARF1Q9Y4F3 1742 aaKnown RBP15.74■□□□□ 0.11
SDF2-209ENST00000591903 FNBP4Q8N3X1 1017 aaPredicted RBP15.73■□□□□ 0.11
SDF2-209ENST00000591903 DDX17Q92841 729 aaKnown RBP15.72■□□□□ 0.11
SDF2-209ENST00000591903 C1orf167Q5SNV9 1468 aa15.71■□□□□ 0.11
SDF2-209ENST00000591903 SOS2Q07890 1332 aaPredicted RBP15.71■□□□□ 0.11
SDF2-209ENST00000591903 SPHKAPQ2M3C7 1700 aa15.71■□□□□ 0.1
SDF2-209ENST00000591903 METP08581 1390 aa15.7■□□□□ 0.1
SDF2-209ENST00000591903 LRP5O75197 1615 aa15.69■□□□□ 0.1
SDF2-209ENST00000591903 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.68■□□□□ 0.1
SDF2-209ENST00000591903 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
SDF2-209ENST00000591903 BLMP54132 1417 aaPredicted RBP15.66■□□□□ 0.1
SDF2-209ENST00000591903 MYOM2P54296 1465 aa15.65■□□□□ 0.1
SDF2-209ENST00000591903 ZNF326Q5BKZ1 582 aaKnown RBP15.65■□□□□ 0.1
SDF2-209ENST00000591903 BCL9LQ86UU0 1499 aa15.65■□□□□ 0.1
SDF2-209ENST00000591903 ROCK1Q13464 1354 aa15.64■□□□□ 0.09
SDF2-209ENST00000591903 KIF1BO60333 1816 aa15.64■□□□□ 0.09
SDF2-209ENST00000591903 NEXMIFQ5QGS0 1516 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms