RNA–Protein interactions for RNA: ENST00000591798.5

DNMT1-225, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-225ENST00000591798 IDI1Q13907 227 aa13.75□□□□□ -0.21
DNMT1-225ENST00000591798 MEX3CQ5U5Q3 659 aaKnown RBP13.75□□□□□ -0.21
DNMT1-225ENST00000591798 CDK12Q9NYV4 1490 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-225ENST00000591798 KIF15Q9NS87 1388 aa13.74□□□□□ -0.21
DNMT1-225ENST00000591798 CROCC2H7BZ55 1655 aa13.74□□□□□ -0.21
DNMT1-225ENST00000591798 AHDC1Q5TGY3 1603 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-225ENST00000591798 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
DNMT1-225ENST00000591798 MYO5BQ9ULV0 1848 aa13.72□□□□□ -0.21
DNMT1-225ENST00000591798 RXRBP28702 533 aa13.72□□□□□ -0.21
DNMT1-225ENST00000591798 LMTK2Q8IWU2 1503 aa13.72□□□□□ -0.21
DNMT1-225ENST00000591798 KANK1Q14678 1352 aa13.71□□□□□ -0.21
DNMT1-225ENST00000591798 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-225ENST00000591798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.71□□□□□ -0.21
DNMT1-225ENST00000591798 NCOA3Q9Y6Q9 1424 aa13.71□□□□□ -0.22
DNMT1-225ENST00000591798 NOS1P29475 1434 aa13.7□□□□□ -0.22
DNMT1-225ENST00000591798 BCANQ96GW7 911 aa13.69□□□□□ -0.22
DNMT1-225ENST00000591798 DIP2AQ14689 1571 aa13.69□□□□□ -0.22
DNMT1-225ENST00000591798 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
DNMT1-225ENST00000591798 RRP7BPQ9NSQ0 103 aa13.68□□□□□ -0.22
DNMT1-225ENST00000591798 PLEKHG1Q9ULL1 1385 aa13.68□□□□□ -0.22
DNMT1-225ENST00000591798 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
DNMT1-225ENST00000591798 ABCC5O15440 1437 aa13.66□□□□□ -0.22
DNMT1-225ENST00000591798 CADPS2Q86UW7 1296 aa13.66□□□□□ -0.22
DNMT1-225ENST00000591798 SLC52A1Q9NWF4 448 aa13.66□□□□□ -0.22
DNMT1-225ENST00000591798 AFF2P51816 1311 aa13.65□□□□□ -0.22
DNMT1-225ENST00000591798 RGS12O14924 1447 aa13.64□□□□□ -0.23
DNMT1-225ENST00000591798 NUTM2BA6NNL0 878 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-225ENST00000591798 NUTM2EB1AL46 878 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-225ENST00000591798 C14orf37Q86TY3 774 aa13.64□□□□□ -0.23
DNMT1-225ENST00000591798 NUTM2AQ8IVF1 878 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-225ENST00000591798 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
DNMT1-225ENST00000591798 ATF3P18847 181 aa13.63□□□□□ -0.23
DNMT1-225ENST00000591798 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
DNMT1-225ENST00000591798 TBX22Q9Y458 520 aa13.63□□□□□ -0.23
DNMT1-225ENST00000591798 TMEM131LA2VDJ0 1609 aa13.63□□□□□ -0.23
DNMT1-225ENST00000591798 PTPN23Q9H3S7 1636 aa13.63□□□□□ -0.23
DNMT1-225ENST00000591798 PPP1R15AO75807 674 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-225ENST00000591798 KANK4Q5T7N3 995 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-225ENST00000591798 DAPK1P53355 1430 aa13.62□□□□□ -0.23
DNMT1-225ENST00000591798 RPRD2Q5VT52 1461 aaKnown RBP13.61□□□□□ -0.23
DNMT1-225ENST00000591798 NHSL1Q5SYE7 1610 aa13.61□□□□□ -0.23
DNMT1-225ENST00000591798 BRINP3Q76B58 766 aa13.61□□□□□ -0.23
DNMT1-225ENST00000591798 VPS8Q8N3P4 1428 aa13.61□□□□□ -0.23
DNMT1-225ENST00000591798 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
DNMT1-225ENST00000591798 ADAMTS13Q76LX8 1427 aa13.6□□□□□ -0.23
DNMT1-225ENST00000591798 SETD5Q9C0A6 1442 aa13.6□□□□□ -0.23
DNMT1-225ENST00000591798 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
DNMT1-225ENST00000591798 PIK3R4Q99570 1358 aa13.59□□□□□ -0.23
DNMT1-225ENST00000591798 RBM6P78332 1123 aaKnown RBP13.59□□□□□ -0.23
DNMT1-225ENST00000591798 QTRT2Q9H974 415 aaKnown RBP13.59□□□□□ -0.23
DNMT1-225ENST00000591798 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.23
DNMT1-225ENST00000591798 DCCP43146 1447 aa13.58□□□□□ -0.24
DNMT1-225ENST00000591798 NUTM2DQ5VT03 806 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-225ENST00000591798 EP400Q96L91 3159 aa13.57□□□□□ -0.24
DNMT1-225ENST00000591798 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
DNMT1-225ENST00000591798 C8orf37Q96NL8 207 aa13.57□□□□□ -0.24
DNMT1-225ENST00000591798 TRPM2O94759 1503 aa13.56□□□□□ -0.24
DNMT1-225ENST00000591798 LRRC59Q96AG4 307 aaKnown RBP13.55□□□□□ -0.24
DNMT1-225ENST00000591798 CHIC2Q9UKJ5 165 aa13.55□□□□□ -0.24
DNMT1-225ENST00000591798 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
DNMT1-225ENST00000591798 MST1RQ04912 1400 aa13.55□□□□□ -0.24
DNMT1-225ENST00000591798 PNPLA6Q8IY17 1366 aa13.54□□□□□ -0.24
DNMT1-225ENST00000591798 PTPRUQ92729 1446 aa13.54□□□□□ -0.24
DNMT1-225ENST00000591798 SETBP1Q9Y6X0 1596 aa13.54□□□□□ -0.24
DNMT1-225ENST00000591798 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
DNMT1-225ENST00000591798 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
DNMT1-225ENST00000591798 AMOTL2Q9Y2J4 779 aa13.53□□□□□ -0.24
DNMT1-225ENST00000591798 UNC13BO14795 1591 aa13.53□□□□□ -0.24
DNMT1-225ENST00000591798 NGLY1Q96IV0 654 aa13.52□□□□□ -0.25
DNMT1-225ENST00000591798 ADGRL2O95490 1459 aa13.52□□□□□ -0.25
DNMT1-225ENST00000591798 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
DNMT1-225ENST00000591798 E9PCH4 1651 aa13.5□□□□□ -0.25
DNMT1-225ENST00000591798 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
DNMT1-225ENST00000591798 ANKRD50Q9ULJ7 1429 aa13.48□□□□□ -0.25
DNMT1-225ENST00000591798 NALCNQ8IZF0 1738 aa13.48□□□□□ -0.25
DNMT1-225ENST00000591798 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
DNMT1-225ENST00000591798 DDX17Q92841 729 aaKnown RBP13.48□□□□□ -0.25
DNMT1-225ENST00000591798 LAMC1P11047 1609 aa13.48□□□□□ -0.25
DNMT1-225ENST00000591798 ADGRL3Q9HAR2 1447 aa13.47□□□□□ -0.25
DNMT1-225ENST00000591798 USP21Q9UK80 565 aa13.46□□□□□ -0.25
DNMT1-225ENST00000591798 TRPC5Q9UL62 973 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-225ENST00000591798 ATRNO75882 1429 aa13.46□□□□□ -0.26
DNMT1-225ENST00000591798 IQGAP3Q86VI3 1631 aa13.44□□□□□ -0.26
DNMT1-225ENST00000591798 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
DNMT1-225ENST00000591798 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
DNMT1-225ENST00000591798 FNBP4Q8N3X1 1017 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-225ENST00000591798 COL22A1Q8NFW1 1626 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-225ENST00000591798 C1orf167Q5SNV9 1468 aa13.42□□□□□ -0.26
DNMT1-225ENST00000591798 MARF1Q9Y4F3 1742 aaKnown RBP13.42□□□□□ -0.26
DNMT1-225ENST00000591798 METP08581 1390 aa13.42□□□□□ -0.26
DNMT1-225ENST00000591798 SOS2Q07890 1332 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-225ENST00000591798 LRP5O75197 1615 aa13.4□□□□□ -0.26
DNMT1-225ENST00000591798 BCL9LQ86UU0 1499 aa13.38□□□□□ -0.27
DNMT1-225ENST00000591798 APLP2Q06481 763 aa13.38□□□□□ -0.27
DNMT1-225ENST00000591798 MYOM2P54296 1465 aa13.37□□□□□ -0.27
DNMT1-225ENST00000591798 SPHKAPQ2M3C7 1700 aa13.37□□□□□ -0.27
DNMT1-225ENST00000591798 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.37□□□□□ -0.27
DNMT1-225ENST00000591798 BLMP54132 1417 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-225ENST00000591798 BRWD3Q6RI45 1802 aa13.36□□□□□ -0.27
DNMT1-225ENST00000591798 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms