RNA–Protein interactions for RNA: ENST00000591471.5

HKR1-223, Transcript of HKR1, GLI-Kruppel zinc finger family member, human

TSL 2 BASIC

Gene HKR1, Length 3,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HKR1-223	ENST00000591471	MYO5B	Q9ULV0	1848 aa		10.73	□□□□□ -0.69
HKR1-223	ENST00000591471	FOXD1	Q16676	465 aa		10.72	□□□□□ -0.69
HKR1-223	ENST00000591471	A2ML1	A8K2U0	1454 aa		10.72	□□□□□ -0.69
HKR1-223	ENST00000591471	SETD1A	O15047	1707 aa	Known RBP	10.71	□□□□□ -0.69
HKR1-223	ENST00000591471	L3MBTL2	Q969R5	705 aa		10.71	□□□□□ -0.69
HKR1-223	ENST00000591471	ARHGAP23	Q9P227	1491 aa		10.71	□□□□□ -0.69
HKR1-223	ENST00000591471	DIP2A	Q14689	1571 aa		10.71	□□□□□ -0.7
HKR1-223	ENST00000591471	TNR	Q92752	1358 aa		10.71	□□□□□ -0.7
HKR1-223	ENST00000591471	PIK3C2G	O75747	1445 aa		10.71	□□□□□ -0.7
HKR1-223	ENST00000591471	KNDC1	Q76NI1	1749 aa		10.69	□□□□□ -0.7
HKR1-223	ENST00000591471	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.69	□□□□□ -0.7
HKR1-223	ENST00000591471	ESF1	Q9H501	851 aa	Known RBP	10.68	□□□□□ -0.7
HKR1-223	ENST00000591471	ADGRB1	O14514	1584 aa		10.67	□□□□□ -0.7
HKR1-223	ENST00000591471	SETD1B	Q9UPS6	1966 aa	Known RBP	10.67	□□□□□ -0.7
HKR1-223	ENST00000591471	NRXN3	Q9Y4C0	1643 aa		10.67	□□□□□ -0.7
HKR1-223	ENST00000591471	PTPRM	P28827	1452 aa		10.66	□□□□□ -0.7
HKR1-223	ENST00000591471	DLC1	Q96QB1	1528 aa		10.65	□□□□□ -0.7
HKR1-223	ENST00000591471	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.65	□□□□□ -0.7
HKR1-223	ENST00000591471	CFAP65	Q6ZU64	1925 aa	Known RBP	10.64	□□□□□ -0.71
HKR1-223	ENST00000591471	IDI1	Q13907	227 aa		10.64	□□□□□ -0.71
HKR1-223	ENST00000591471	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
HKR1-223	ENST00000591471	VGF	O15240	615 aa	Predicted RBP	10.63	□□□□□ -0.71
HKR1-223	ENST00000591471	HDGF	P51858	240 aa	Known RBP	10.63	□□□□□ -0.71
HKR1-223	ENST00000591471	SLC24A1	O60721	1099 aa		10.63	□□□□□ -0.71
HKR1-223	ENST00000591471	NBPF8	Q3BBV2	869 aa		10.63	□□□□□ -0.71
HKR1-223	ENST00000591471	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.63	□□□□□ -0.71
HKR1-223	ENST00000591471	MED14	O60244	1454 aa		10.62	□□□□□ -0.71
HKR1-223	ENST00000591471	SCAF11	Q99590	1463 aa	Known RBP	10.62	□□□□□ -0.71
HKR1-223	ENST00000591471	ALK	Q9UM73	1620 aa		10.62	□□□□□ -0.71
HKR1-223	ENST00000591471	SBNO2	Q9Y2G9	1366 aa		10.62	□□□□□ -0.71
HKR1-223	ENST00000591471	TMEM2	Q9UHN6	1383 aa		10.62	□□□□□ -0.71
HKR1-223	ENST00000591471	DDX10	Q13206	875 aa	Known RBP	10.62	□□□□□ -0.71
HKR1-223	ENST00000591471	RIMS2	Q9UQ26	1411 aa		10.62	□□□□□ -0.71
HKR1-223	ENST00000591471	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.61	□□□□□ -0.71
HKR1-223	ENST00000591471	DCAF11	Q8TEB1	546 aa		10.61	□□□□□ -0.71
HKR1-223	ENST00000591471	PLEKHG1	Q9ULL1	1385 aa		10.61	□□□□□ -0.71
HKR1-223	ENST00000591471	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.6	□□□□□ -0.71
HKR1-223	ENST00000591471	C14orf93	Q9H972	538 aa	Known RBP	10.6	□□□□□ -0.71
HKR1-223	ENST00000591471	CPS1	P31327	1500 aa		10.6	□□□□□ -0.71
HKR1-223	ENST00000591471	ASXL1	Q8IXJ9	1541 aa		10.6	□□□□□ -0.71
HKR1-223	ENST00000591471	TECPR2	O15040	1411 aa		10.59	□□□□□ -0.71
HKR1-223	ENST00000591471	EIF3A	Q14152	1382 aa	Known RBP	10.59	□□□□□ -0.71
HKR1-223	ENST00000591471	ROCK2	O75116	1388 aa	Known RBP	10.58	□□□□□ -0.72
HKR1-223	ENST00000591471	SIRT1	Q96EB6	747 aa		10.58	□□□□□ -0.72
HKR1-223	ENST00000591471	PIK3R4	Q99570	1358 aa		10.58	□□□□□ -0.72
HKR1-223	ENST00000591471	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.57	□□□□□ -0.72
HKR1-223	ENST00000591471	MLEC	Q14165	292 aa		10.57	□□□□□ -0.72
HKR1-223	ENST00000591471	XRN1	Q8IZH2	1706 aa	Known RBP	10.57	□□□□□ -0.72
HKR1-223	ENST00000591471	ADGRB2	O60241	1585 aa		10.57	□□□□□ -0.72
HKR1-223	ENST00000591471	USP47	Q96K76	1375 aa		10.56	□□□□□ -0.72
HKR1-223	ENST00000591471	QRICH2	Q9H0J4	1663 aa		10.56	□□□□□ -0.72
HKR1-223	ENST00000591471	NWD1	Q149M9	1564 aa		10.56	□□□□□ -0.72
HKR1-223	ENST00000591471	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.56	□□□□□ -0.72
HKR1-223	ENST00000591471	PUS7	Q96PZ0	661 aa	Known RBP	10.56	□□□□□ -0.72
HKR1-223	ENST00000591471	ADGRF5	Q8IZF2	1346 aa		10.55	□□□□□ -0.72
HKR1-223	ENST00000591471	FAM135B	Q49AJ0	1406 aa		10.55	□□□□□ -0.72
HKR1-223	ENST00000591471	ADAMTS13	Q76LX8	1427 aa		10.53	□□□□□ -0.72
HKR1-223	ENST00000591471	RGL3	Q3MIN7	710 aa		10.53	□□□□□ -0.72
HKR1-223	ENST00000591471	CHD2	O14647	1828 aa	Known RBP	10.53	□□□□□ -0.72
HKR1-223	ENST00000591471	LRPPRC	P42704	1394 aa	Known RBP	10.53	□□□□□ -0.72
HKR1-223	ENST00000591471	ABCC11	Q96J66	1382 aa		10.53	□□□□□ -0.72
HKR1-223	ENST00000591471	PTCH1	Q13635	1447 aa		10.52	□□□□□ -0.72
HKR1-223	ENST00000591471	ZNF326	Q5BKZ1	582 aa	Known RBP	10.52	□□□□□ -0.72
HKR1-223	ENST00000591471	CARD11	Q9BXL7	1154 aa		10.52	□□□□□ -0.73
HKR1-223	ENST00000591471	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.51	□□□□□ -0.73
HKR1-223	ENST00000591471	HSPA5	P11021	654 aa	Known RBP	10.5	□□□□□ -0.73
HKR1-223	ENST00000591471	MYOM1	P52179	1685 aa		10.5	□□□□□ -0.73
HKR1-223	ENST00000591471	TBX22	Q9Y458	520 aa		10.49	□□□□□ -0.73
HKR1-223	ENST00000591471	USP32	Q8NFA0	1604 aa		10.49	□□□□□ -0.73
HKR1-223	ENST00000591471	STAG3	Q9UJ98	1225 aa		10.49	□□□□□ -0.73
HKR1-223	ENST00000591471	KDM2A	Q9Y2K7	1162 aa		10.49	□□□□□ -0.73
HKR1-223	ENST00000591471	EID1	Q9Y6B2	187 aa		10.49	□□□□□ -0.73
HKR1-223	ENST00000591471	LMTK3	Q96Q04	1460 aa		10.49	□□□□□ -0.73
HKR1-223	ENST00000591471	ANP32C	O43423	234 aa		10.49	□□□□□ -0.73
HKR1-223	ENST00000591471	CCDC7	Q96M83	1385 aa		10.48	□□□□□ -0.73
HKR1-223	ENST00000591471	NINL	Q9Y2I6	1382 aa		10.48	□□□□□ -0.73
HKR1-223	ENST00000591471	KDM4F	A0A1W2PPD8	638 aa		10.48	□□□□□ -0.73
HKR1-223	ENST00000591471	CEBPA	P49715	358 aa	Predicted RBP	10.48	□□□□□ -0.73
HKR1-223	ENST00000591471	TESK2	Q96S53	571 aa		10.48	□□□□□ -0.73
HKR1-223	ENST00000591471	NCOA3	Q9Y6Q9	1424 aa		10.47	□□□□□ -0.73
HKR1-223	ENST00000591471	NBPF1	Q3BBV0	1214 aa		10.47	□□□□□ -0.73
HKR1-223	ENST00000591471	CDCA8	Q53HL2	280 aa		10.47	□□□□□ -0.73
HKR1-223	ENST00000591471	CHGA	P10645	457 aa	Known RBP	10.46	□□□□□ -0.73
HKR1-223	ENST00000591471	CFAP70	Q5T0N1	1121 aa		10.46	□□□□□ -0.73
HKR1-223	ENST00000591471	STRC	Q7RTU9	1775 aa		10.46	□□□□□ -0.73
HKR1-223	ENST00000591471	TOPAZ1	Q8N9V7	1692 aa		10.46	□□□□□ -0.73
HKR1-223	ENST00000591471	CCER2	I3L3R5	266 aa		10.46	□□□□□ -0.73
HKR1-223	ENST00000591471	NKTR	P30414	1462 aa	Known RBP	10.46	□□□□□ -0.73
HKR1-223	ENST00000591471	NPHP4	O75161	1426 aa	Predicted RBP	10.46	□□□□□ -0.74
HKR1-223	ENST00000591471	ANKLE2	Q86XL3	938 aa		10.45	□□□□□ -0.74
HKR1-223	ENST00000591471	TULP4	Q9NRJ4	1543 aa		10.45	□□□□□ -0.74
HKR1-223	ENST00000591471	ITSN1	Q15811	1721 aa		10.44	□□□□□ -0.74
HKR1-223	ENST00000591471	WASHC2A	Q641Q2	1341 aa		10.44	□□□□□ -0.74
HKR1-223	ENST00000591471	LTK	P29376	864 aa		10.43	□□□□□ -0.74
HKR1-223	ENST00000591471	KTN1	Q86UP2	1357 aa	Known RBP	10.43	□□□□□ -0.74
HKR1-223	ENST00000591471	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.43	□□□□□ -0.74
HKR1-223	ENST00000591471	CDC42BPG	Q6DT37	1551 aa		10.43	□□□□□ -0.74
HKR1-223	ENST00000591471	TMF1	P82094	1093 aa		10.43	□□□□□ -0.74
HKR1-223	ENST00000591471	TXNDC2	Q86VQ3	553 aa		10.43	□□□□□ -0.74
HKR1-223	ENST00000591471	MET	P08581	1390 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms