RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ERBINQ96RT1 1412 aa9.67□□□□□ -0.86
VPS4B-205ENST00000591383 CEP152O94986 1710 aa9.67□□□□□ -0.86
VPS4B-205ENST00000591383 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
VPS4B-205ENST00000591383 RRP7BPQ9NSQ0 103 aa9.66□□□□□ -0.86
VPS4B-205ENST00000591383 CLTCQ00610 1675 aaKnown RBP9.66□□□□□ -0.86
VPS4B-205ENST00000591383 DEPDC5O75140 1603 aa9.66□□□□□ -0.86
VPS4B-205ENST00000591383 NCOA1Q15788 1441 aa9.65□□□□□ -0.86
VPS4B-205ENST00000591383 ROCK1Q13464 1354 aa9.65□□□□□ -0.86
VPS4B-205ENST00000591383 ZC3H13Q5T200 1668 aaKnown RBP9.65□□□□□ -0.86
VPS4B-205ENST00000591383 MROH1Q8NDA8 1641 aa9.65□□□□□ -0.86
VPS4B-205ENST00000591383 MLECQ14165 292 aa9.65□□□□□ -0.86
VPS4B-205ENST00000591383 PRDM15P57071 1507 aaPredicted RBP9.65□□□□□ -0.86
VPS4B-205ENST00000591383 DHX29Q7Z478 1369 aaKnown RBP9.64□□□□□ -0.87
VPS4B-205ENST00000591383 UNC13BO14795 1591 aa9.64□□□□□ -0.87
VPS4B-205ENST00000591383 KDM5DQ9BY66 1539 aa9.64□□□□□ -0.87
VPS4B-205ENST00000591383 ANKRD50Q9ULJ7 1429 aa9.64□□□□□ -0.87
VPS4B-205ENST00000591383 MROH2AA6NES4 1674 aa9.62□□□□□ -0.87
VPS4B-205ENST00000591383 PITPNM1O00562 1244 aa9.62□□□□□ -0.87
VPS4B-205ENST00000591383 CAMSAP1Q5T5Y3 1602 aa9.62□□□□□ -0.87
VPS4B-205ENST00000591383 HFM1A2PYH4 1435 aa9.62□□□□□ -0.87
VPS4B-205ENST00000591383 FAM135AQ9P2D6 1515 aa9.61□□□□□ -0.87
VPS4B-205ENST00000591383 KIF3BO15066 747 aa9.61□□□□□ -0.87
VPS4B-205ENST00000591383 CADPS2Q86UW7 1296 aa9.61□□□□□ -0.87
VPS4B-205ENST00000591383 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
VPS4B-205ENST00000591383 GTF3C3Q9Y5Q9 886 aa9.61□□□□□ -0.87
VPS4B-205ENST00000591383 NAIPQ13075 1403 aa9.61□□□□□ -0.87
VPS4B-205ENST00000591383 ABCC3O15438 1527 aa9.61□□□□□ -0.87
VPS4B-205ENST00000591383 C3P01024 1663 aa9.61□□□□□ -0.87
VPS4B-205ENST00000591383 TULP1O00294 542 aaPredicted RBP9.6□□□□□ -0.87
VPS4B-205ENST00000591383 IQGAP3Q86VI3 1631 aa9.6□□□□□ -0.87
VPS4B-205ENST00000591383 GGT6Q6P531 493 aa9.59□□□□□ -0.87
VPS4B-205ENST00000591383 ZNF467Q7Z7K2 595 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-205ENST00000591383 ESF1Q9H501 851 aaKnown RBP9.59□□□□□ -0.87
VPS4B-205ENST00000591383 TET3O43151 1660 aa9.58□□□□□ -0.88
VPS4B-205ENST00000591383 CNTLNQ9NXG0 1405 aa9.58□□□□□ -0.88
VPS4B-205ENST00000591383 EFCAB6Q5THR3 1501 aa9.58□□□□□ -0.88
VPS4B-205ENST00000591383 KCNV2Q8TDN2 545 aa9.58□□□□□ -0.88
VPS4B-205ENST00000591383 WDR70Q9NW82 654 aa9.58□□□□□ -0.88
VPS4B-205ENST00000591383 KANK1Q14678 1352 aa9.58□□□□□ -0.88
VPS4B-205ENST00000591383 PTPRMP28827 1452 aa9.58□□□□□ -0.88
VPS4B-205ENST00000591383 VWDEQ8N2E2 1590 aa9.57□□□□□ -0.88
VPS4B-205ENST00000591383 KDM4FA0A1W2PPD8 638 aa9.56□□□□□ -0.88
VPS4B-205ENST00000591383 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
VPS4B-205ENST00000591383 TSPYL2Q9H2G4 693 aaPredicted RBP9.56□□□□□ -0.88
VPS4B-205ENST00000591383 PREX1Q8TCU6 1659 aa9.55□□□□□ -0.88
VPS4B-205ENST00000591383 TMEM132AQ24JP5 1023 aa9.55□□□□□ -0.88
VPS4B-205ENST00000591383 MYO3AQ8NEV4 1616 aa9.55□□□□□ -0.88
VPS4B-205ENST00000591383 SETD5Q9C0A6 1442 aa9.55□□□□□ -0.88
VPS4B-205ENST00000591383 PZPP20742 1482 aa9.54□□□□□ -0.88
VPS4B-205ENST00000591383 RAB3GAP2Q9H2M9 1393 aa9.54□□□□□ -0.88
VPS4B-205ENST00000591383 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
VPS4B-205ENST00000591383 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS4B-205ENST00000591383 PCDHB8Q9UN66 801 aa9.54□□□□□ -0.88
VPS4B-205ENST00000591383 PCDHB13Q9Y5F0 798 aa9.54□□□□□ -0.88
VPS4B-205ENST00000591383 LMTK2Q8IWU2 1503 aa9.54□□□□□ -0.88
VPS4B-205ENST00000591383 E9PCH4 1651 aa9.54□□□□□ -0.88
VPS4B-205ENST00000591383 WASHC2CQ9Y4E1 1318 aa9.54□□□□□ -0.88
VPS4B-205ENST00000591383 CHADLQ6NUI6 762 aa9.53□□□□□ -0.88
VPS4B-205ENST00000591383 LMOD2Q6P5Q4 547 aa9.53□□□□□ -0.88
VPS4B-205ENST00000591383 SPHKAPQ2M3C7 1700 aa9.53□□□□□ -0.88
VPS4B-205ENST00000591383 CFAP65Q6ZU64 1925 aaKnown RBP9.52□□□□□ -0.88
VPS4B-205ENST00000591383 NUP155O75694 1391 aa9.52□□□□□ -0.88
VPS4B-205ENST00000591383 ERVK-7P63135 1459 aa9.52□□□□□ -0.89
VPS4B-205ENST00000591383 TRIM52Q96A61 297 aa9.51□□□□□ -0.89
VPS4B-205ENST00000591383 MFRPQ9BY79 579 aa9.51□□□□□ -0.89
VPS4B-205ENST00000591383 ZNF142P52746 1687 aaPredicted RBP9.51□□□□□ -0.89
VPS4B-205ENST00000591383 NPATQ14207 1427 aa9.5□□□□□ -0.89
VPS4B-205ENST00000591383 SYNMO15061 1565 aa9.5□□□□□ -0.89
VPS4B-205ENST00000591383 SPATA31D1Q6ZQQ2 1576 aa9.5□□□□□ -0.89
VPS4B-205ENST00000591383 CEBPAP49715 358 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-205ENST00000591383 PSEN1P49768 467 aa9.49□□□□□ -0.89
VPS4B-205ENST00000591383 FARP1Q9Y4F1 1045 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-205ENST00000591383 CEP170BQ9Y4F5 1589 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-205ENST00000591383 ZMYM3Q14202 1370 aa9.49□□□□□ -0.89
VPS4B-205ENST00000591383 RPRD2Q5VT52 1461 aaKnown RBP9.48□□□□□ -0.89
VPS4B-205ENST00000591383 TNRQ92752 1358 aa9.48□□□□□ -0.89
VPS4B-205ENST00000591383 ARHGAP31Q2M1Z3 1444 aa9.48□□□□□ -0.89
VPS4B-205ENST00000591383 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
VPS4B-205ENST00000591383 UGGT1Q9NYU2 1555 aa9.47□□□□□ -0.89
VPS4B-205ENST00000591383 ZNF579Q8NAF0 562 aaKnown RBP9.47□□□□□ -0.89
VPS4B-205ENST00000591383 CCDC61Q9Y6R9 512 aa9.47□□□□□ -0.89
VPS4B-205ENST00000591383 TRPM2O94759 1503 aa9.46□□□□□ -0.89
VPS4B-205ENST00000591383 PIK3C2BO00750 1634 aa9.46□□□□□ -0.89
VPS4B-205ENST00000591383 CLTCL1P53675 1640 aa9.46□□□□□ -0.89
VPS4B-205ENST00000591383 ERICH6Q7L0X2 663 aa9.46□□□□□ -0.9
VPS4B-205ENST00000591383 PCGF6Q9BYE7 350 aa9.46□□□□□ -0.9
VPS4B-205ENST00000591383 ADGRB3O60242 1522 aa9.46□□□□□ -0.9
VPS4B-205ENST00000591383 FBXO31Q5XUX0 539 aaPredicted RBP9.45□□□□□ -0.9
VPS4B-205ENST00000591383 ARHGEF1Q92888 912 aaKnown RBP9.45□□□□□ -0.9
VPS4B-205ENST00000591383 LMTK3Q96Q04 1460 aa9.45□□□□□ -0.9
VPS4B-205ENST00000591383 MYO5BQ9ULV0 1848 aa9.45□□□□□ -0.9
VPS4B-205ENST00000591383 PPP1R37O75864 691 aa9.44□□□□□ -0.9
VPS4B-205ENST00000591383 NLRP1Q9C000 1473 aa9.44□□□□□ -0.9
VPS4B-205ENST00000591383 UBR1Q8IWV7 1749 aa9.44□□□□□ -0.9
VPS4B-205ENST00000591383 A2ML1A8K2U0 1454 aa9.43□□□□□ -0.9
VPS4B-205ENST00000591383 NOS1P29475 1434 aa9.43□□□□□ -0.9
VPS4B-205ENST00000591383 SETD1BQ9UPS6 1966 aaKnown RBP9.43□□□□□ -0.9
VPS4B-205ENST00000591383 KIF1BO60333 1816 aa9.42□□□□□ -0.9
VPS4B-205ENST00000591383 POLR1AO95602 1720 aaPredicted RBP9.42□□□□□ -0.9
VPS4B-205ENST00000591383 ACIN1Q9UKV3 1341 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms