RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-222	ENST00000589727	TCOF1	Q13428	1488 aa	Known RBP	12.01	□□□□□ -0.49
ATP6V0A1-222	ENST00000589727	SETD1A	O15047	1707 aa	Known RBP	12	□□□□□ -0.49
ATP6V0A1-222	ENST00000589727	NPAT	Q14207	1427 aa		11.99	□□□□□ -0.49
ATP6V0A1-222	ENST00000589727	SHANK2	Q9UPX8	1470 aa		11.99	□□□□□ -0.49
ATP6V0A1-222	ENST00000589727	HS6ST3	Q8IZP7	471 aa		11.98	□□□□□ -0.49
ATP6V0A1-222	ENST00000589727	MYT1L	Q9UL68	1186 aa		11.98	□□□□□ -0.49
ATP6V0A1-222	ENST00000589727	ALK	Q9UM73	1620 aa		11.97	□□□□□ -0.49
ATP6V0A1-222	ENST00000589727	CNTLN	Q9NXG0	1405 aa		11.97	□□□□□ -0.49
ATP6V0A1-222	ENST00000589727	PLEKHD1	A6NEE1	506 aa		11.97	□□□□□ -0.49
ATP6V0A1-222	ENST00000589727	CHGA	P10645	457 aa	Known RBP	11.97	□□□□□ -0.49
ATP6V0A1-222	ENST00000589727	P3H3	Q8IVL6	736 aa		11.95	□□□□□ -0.5
ATP6V0A1-222	ENST00000589727	TMEM92	Q6UXU6	159 aa		11.94	□□□□□ -0.5
ATP6V0A1-222	ENST00000589727	PCDH10	Q9P2E7	1040 aa		11.93	□□□□□ -0.5
ATP6V0A1-222	ENST00000589727	AGL	P35573	1532 aa		11.91	□□□□□ -0.5
ATP6V0A1-222	ENST00000589727	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
ATP6V0A1-222	ENST00000589727	ZMYM3	Q14202	1370 aa		11.91	□□□□□ -0.5
ATP6V0A1-222	ENST00000589727	TRIM52	Q96A61	297 aa		11.9	□□□□□ -0.5
ATP6V0A1-222	ENST00000589727	HOXB3	P14651	431 aa	Predicted RBP	11.89	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	AFAP1	Q8N556	730 aa		11.89	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	MARVELD3	Q96A59	401 aa		11.89	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	EFCAB2	Q5VUJ9	269 aa		11.88	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	ZNF518A	Q6AHZ1	1483 aa		11.88	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.88	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	PLCH2	O75038	1416 aa		11.87	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	DOK7	Q18PE1	504 aa		11.87	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	ZNF710	Q8N1W2	664 aa		11.87	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	RERE	Q9P2R6	1566 aa		11.87	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	PPP1R37	O75864	691 aa		11.86	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	ZNF142	P52746	1687 aa	Predicted RBP	11.85	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	DIP2C	Q9Y2E4	1556 aa		11.85	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	NUP153	P49790	1475 aa	Known RBP	11.85	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	SUPT5H	O00267	1087 aa	Known RBP	11.85	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	CDAN1	Q8IWY9	1227 aa		11.85	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	PLSCR2	Q9NRY7	297 aa		11.85	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	RAPGEF6	Q8TEU7	1601 aa		11.85	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	EMP3	P54852	163 aa		11.84	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	MYO3A	Q8NEV4	1616 aa		11.84	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	VWDE	Q8N2E2	1590 aa		11.84	□□□□□ -0.51
ATP6V0A1-222	ENST00000589727	CTTNBP2	Q8WZ74	1663 aa		11.83	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	LRRC7	Q96NW7	1537 aa		11.82	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	IFFO2	Q5TF58	517 aa		11.82	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	ANKLE2	Q86XL3	938 aa		11.82	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.82	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	RNF17	Q9BXT8	1623 aa	Known RBP	11.82	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	KDM5C	P41229	1560 aa		11.81	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	RIMBP2	O15034	1052 aa		11.81	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	NKX1-1	Q15270	411 aa	Predicted RBP	11.81	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	ZNF772	Q68DY9	489 aa	Predicted RBP	11.81	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	A2ML1	A8K2U0	1454 aa		11.8	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	NEURL4	Q96JN8	1562 aa		11.79	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	FAM135B	Q49AJ0	1406 aa		11.79	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	MROH2A	A6NES4	1674 aa		11.79	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	MLH3	Q9UHC1	1453 aa		11.79	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	C2orf72	A6NCS6	295 aa		11.79	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	RXRB	P28702	533 aa		11.79	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	RBM33	Q96EV2	1170 aa	Known RBP	11.79	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	HOXB1	P14653	301 aa	Predicted RBP	11.78	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	ABCA6	Q8N139	1617 aa		11.78	□□□□□ -0.52
ATP6V0A1-222	ENST00000589727	KIF3C	O14782	793 aa		11.77	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	NPHP4	O75161	1426 aa	Predicted RBP	11.77	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	FAM205C	A6NFA0	338 aa		11.76	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	TMC2	Q8TDI7	906 aa		11.76	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	RYDEN	Q9NUL5	291 aa	Known RBP	11.76	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	DNMT1	P26358	1616 aa	Known RBP	11.75	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	MEX3C	Q5U5Q3	659 aa	Known RBP	11.75	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	ZSWIM6	Q9HCJ5	1215 aa		11.75	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	HS3ST6	Q96QI5	342 aa		11.74	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	POLR1A	O95602	1720 aa	Predicted RBP	11.73	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.73	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	JCAD	Q9P266	1359 aa		11.73	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	SYNM	O15061	1565 aa		11.72	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	SETBP1	Q9Y6X0	1596 aa		11.72	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.72	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	MED14	O60244	1454 aa		11.71	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	GPR153	Q6NV75	609 aa		11.71	□□□□□ -0.53
ATP6V0A1-222	ENST00000589727	POTEB3	A0JP26	581 aa		11.7	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	POTEB	Q6S5H4	581 aa		11.7	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	ARHGAP5	Q13017	1502 aa		11.7	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	ERBB3	P21860	1342 aa		11.69	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.69	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	GGT6	Q6P531	493 aa		11.69	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	CLTC	Q00610	1675 aa	Known RBP	11.68	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.68	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	NUTM2E	B1AL46	878 aa	Predicted RBP	11.68	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	ARSI	Q5FYB1	569 aa		11.68	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.68	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.68	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	CDK13	Q14004	1512 aa	Known RBP	11.68	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	TNR	Q92752	1358 aa		11.67	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	SAMD9	Q5K651	1589 aa		11.67	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	ABCC1	P33527	1531 aa		11.67	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	SPATA31A6	Q5VVP1	1343 aa		11.66	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	GTPBP6	O43824	516 aa	Predicted RBP	11.66	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	STRCP1	A6NGW2	1772 aa		11.66	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	MYO5C	Q9NQX4	1742 aa		11.65	□□□□□ -0.54
ATP6V0A1-222	ENST00000589727	DEPDC5	O75140	1603 aa		11.64	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	LRP6	O75581	1613 aa		11.64	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.64	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	GPHN	Q9NQX3	736 aa	Predicted RBP	11.64	□□□□□ -0.55

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