RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 MYO5BQ9ULV0 1848 aa10.05□□□□□ -0.8
VPS25-204ENST00000589577 ZRANB1Q9UGI0 708 aa10.04□□□□□ -0.8
VPS25-204ENST00000589577 ATAD2Q6PL18 1390 aa10.03□□□□□ -0.8
VPS25-204ENST00000589577 ADGRB3O60242 1522 aa10.03□□□□□ -0.8
VPS25-204ENST00000589577 NUTM2BA6NNL0 878 aaPredicted RBP10.03□□□□□ -0.8
VPS25-204ENST00000589577 NUTM2EB1AL46 878 aaPredicted RBP10.03□□□□□ -0.8
VPS25-204ENST00000589577 RBM6P78332 1123 aaKnown RBP10.03□□□□□ -0.8
VPS25-204ENST00000589577 NUTM2DQ5VT03 806 aaPredicted RBP10.03□□□□□ -0.8
VPS25-204ENST00000589577 NUTM2AQ8IVF1 878 aaPredicted RBP10.03□□□□□ -0.8
VPS25-204ENST00000589577 ASXL1Q8IXJ9 1541 aa10.02□□□□□ -0.81
VPS25-204ENST00000589577 SETD5Q9C0A6 1442 aa10.01□□□□□ -0.81
VPS25-204ENST00000589577 NCOA3Q9Y6Q9 1424 aa10.01□□□□□ -0.81
VPS25-204ENST00000589577 QTRT2Q9H974 415 aaKnown RBP10.01□□□□□ -0.81
VPS25-204ENST00000589577 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
VPS25-204ENST00000589577 ZFYVE9O95405 1425 aa9.99□□□□□ -0.81
VPS25-204ENST00000589577 DUOX2Q9NRD8 1548 aa9.99□□□□□ -0.81
VPS25-204ENST00000589577 IDI1Q13907 227 aa9.99□□□□□ -0.81
VPS25-204ENST00000589577 BRINP3Q76B58 766 aa9.99□□□□□ -0.81
VPS25-204ENST00000589577 C8orf37Q96NL8 207 aa9.98□□□□□ -0.81
VPS25-204ENST00000589577 GCC2Q8IWJ2 1684 aa9.98□□□□□ -0.81
VPS25-204ENST00000589577 PNPLA6Q8IY17 1366 aa9.98□□□□□ -0.81
VPS25-204ENST00000589577 PLEKHG1Q9ULL1 1385 aa9.97□□□□□ -0.81
VPS25-204ENST00000589577 NOS1P29475 1434 aa9.97□□□□□ -0.81
VPS25-204ENST00000589577 LMTK2Q8IWU2 1503 aa9.97□□□□□ -0.81
VPS25-204ENST00000589577 CROCC2H7BZ55 1655 aa9.96□□□□□ -0.81
VPS25-204ENST00000589577 TSPY4P0CV99 314 aa9.96□□□□□ -0.82
VPS25-204ENST00000589577 TSPY10P0CW01 314 aa9.96□□□□□ -0.82
VPS25-204ENST00000589577 CADPS2Q86UW7 1296 aa9.96□□□□□ -0.82
VPS25-204ENST00000589577 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.82
VPS25-204ENST00000589577 ADAMTS13Q76LX8 1427 aa9.95□□□□□ -0.82
VPS25-204ENST00000589577 TMEM131LA2VDJ0 1609 aa9.95□□□□□ -0.82
VPS25-204ENST00000589577 LAMC1P11047 1609 aa9.94□□□□□ -0.82
VPS25-204ENST00000589577 ATRNO75882 1429 aa9.94□□□□□ -0.82
VPS25-204ENST00000589577 DCCP43146 1447 aa9.94□□□□□ -0.82
VPS25-204ENST00000589577 MST1RQ04912 1400 aa9.94□□□□□ -0.82
VPS25-204ENST00000589577 ERBINQ96RT1 1412 aa9.94□□□□□ -0.82
VPS25-204ENST00000589577 FOXD1Q16676 465 aa9.94□□□□□ -0.82
VPS25-204ENST00000589577 NGLY1Q96IV0 654 aa9.94□□□□□ -0.82
VPS25-204ENST00000589577 C19orf44Q9H6X5 657 aa9.94□□□□□ -0.82
VPS25-204ENST00000589577 XRN1Q8IZH2 1706 aaKnown RBP9.93□□□□□ -0.82
VPS25-204ENST00000589577 ATF3P18847 181 aa9.93□□□□□ -0.82
VPS25-204ENST00000589577 BRWD3Q6RI45 1802 aa9.93□□□□□ -0.82
VPS25-204ENST00000589577 TRPM2O94759 1503 aa9.92□□□□□ -0.82
VPS25-204ENST00000589577 PTPRUQ92729 1446 aa9.92□□□□□ -0.82
VPS25-204ENST00000589577 C14orf37Q86TY3 774 aa9.92□□□□□ -0.82
VPS25-204ENST00000589577 DDX17Q92841 729 aaKnown RBP9.92□□□□□ -0.82
VPS25-204ENST00000589577 MARF1Q9Y4F3 1742 aaKnown RBP9.92□□□□□ -0.82
VPS25-204ENST00000589577 BCL9LQ86UU0 1499 aa9.91□□□□□ -0.82
VPS25-204ENST00000589577 RIMS2Q9UQ26 1411 aa9.91□□□□□ -0.82
VPS25-204ENST00000589577 NALCNQ8IZF0 1738 aa9.91□□□□□ -0.82
VPS25-204ENST00000589577 CCDC125Q86Z20 511 aa9.91□□□□□ -0.82
VPS25-204ENST00000589577 BCANQ96GW7 911 aa9.91□□□□□ -0.82
VPS25-204ENST00000589577 TBX22Q9Y458 520 aa9.91□□□□□ -0.82
VPS25-204ENST00000589577 COL22A1Q8NFW1 1626 aaPredicted RBP9.91□□□□□ -0.82
VPS25-204ENST00000589577 KIF15Q9NS87 1388 aa9.9□□□□□ -0.82
VPS25-204ENST00000589577 ADAMTS2O95450 1211 aa9.9□□□□□ -0.82
VPS25-204ENST00000589577 LRRC59Q96AG4 307 aaKnown RBP9.9□□□□□ -0.82
VPS25-204ENST00000589577 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.83
VPS25-204ENST00000589577 NRXN3Q9Y4C0 1643 aa9.89□□□□□ -0.83
VPS25-204ENST00000589577 UNC13BO14795 1591 aa9.89□□□□□ -0.83
VPS25-204ENST00000589577 USP21Q9UK80 565 aa9.89□□□□□ -0.83
VPS25-204ENST00000589577 TRPC5Q9UL62 973 aaPredicted RBP9.89□□□□□ -0.83
VPS25-204ENST00000589577 SPHKAPQ2M3C7 1700 aa9.89□□□□□ -0.83
VPS25-204ENST00000589577 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.89□□□□□ -0.83
VPS25-204ENST00000589577 PIK3R4Q99570 1358 aa9.88□□□□□ -0.83
VPS25-204ENST00000589577 GLI3P10071 1580 aa9.88□□□□□ -0.83
VPS25-204ENST00000589577 DEFB132Q7Z7B7 95 aa9.88□□□□□ -0.83
VPS25-204ENST00000589577 FNBP4Q8N3X1 1017 aaPredicted RBP9.88□□□□□ -0.83
VPS25-204ENST00000589577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.88□□□□□ -0.834e-8■□□□□ 10.6
VPS25-204ENST00000589577 PTCH1Q13635 1447 aa9.87□□□□□ -0.83
VPS25-204ENST00000589577 SLC52A1Q9NWF4 448 aa9.86□□□□□ -0.83
VPS25-204ENST00000589577 KANK1Q14678 1352 aa9.86□□□□□ -0.83
VPS25-204ENST00000589577 ABCC5O15440 1437 aa9.85□□□□□ -0.83
VPS25-204ENST00000589577 MYOM3Q5VTT5 1437 aa9.85□□□□□ -0.83
VPS25-204ENST00000589577 PPP1R15AO75807 674 aaPredicted RBP9.85□□□□□ -0.83
VPS25-204ENST00000589577 MYOM2P54296 1465 aa9.85□□□□□ -0.83
VPS25-204ENST00000589577 RPRD2Q5VT52 1461 aaKnown RBP9.85□□□□□ -0.83
VPS25-204ENST00000589577 HRCP23327 699 aa9.84□□□□□ -0.83
VPS25-204ENST00000589577 RRP7BPQ9NSQ0 103 aa9.84□□□□□ -0.83
VPS25-204ENST00000589577 AMOTL2Q9Y2J4 779 aa9.84□□□□□ -0.83
VPS25-204ENST00000589577 ADGRL3Q9HAR2 1447 aa9.83□□□□□ -0.84
VPS25-204ENST00000589577 PSDA5PKW4 1024 aaPredicted RBP9.83□□□□□ -0.84
VPS25-204ENST00000589577 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
VPS25-204ENST00000589577 C1orf167Q5SNV9 1468 aa9.82□□□□□ -0.84
VPS25-204ENST00000589577 RALGAPBQ86X10 1494 aa9.82□□□□□ -0.84
VPS25-204ENST00000589577 GJD4Q96KN9 370 aaPredicted RBP9.81□□□□□ -0.84
VPS25-204ENST00000589577 E9PCH4 1651 aa9.8□□□□□ -0.84
VPS25-204ENST00000589577 PTPN23Q9H3S7 1636 aa9.8□□□□□ -0.84
VPS25-204ENST00000589577 DAPK1P53355 1430 aa9.8□□□□□ -0.84
VPS25-204ENST00000589577 IQGAP3Q86VI3 1631 aa9.79□□□□□ -0.84
VPS25-204ENST00000589577 YY1P25490 414 aa9.79□□□□□ -0.84
VPS25-204ENST00000589577 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.79□□□□□ -0.84
VPS25-204ENST00000589577 UTRNP46939 3433 aa9.78□□□□□ -0.84
VPS25-204ENST00000589577 METP08581 1390 aa9.78□□□□□ -0.84
VPS25-204ENST00000589577 SLIT2O94813 1529 aa9.78□□□□□ -0.84
VPS25-204ENST00000589577 HDGFP51858 240 aaKnown RBP9.78□□□□□ -0.84
VPS25-204ENST00000589577 TNS1Q9HBL0 1735 aaKnown RBP9.78□□□□□ -0.84
VPS25-204ENST00000589577 PXDNQ92626 1479 aa9.78□□□□□ -0.84
VPS25-204ENST00000589577 IFFO2Q5TF58 517 aa9.77□□□□□ -0.85
VPS25-204ENST00000589577 ORAI2Q96SN7 254 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms