RNA–Protein interactions for RNA: ENST00000589550.1

PIK3C3-211, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-211ENST00000589550 TUSC1Q2TAM9 212 aa9.33□□□□□ -0.92
PIK3C3-211ENST00000589550 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
PIK3C3-211ENST00000589550 RBM46Q8TBY0 533 aaKnown RBP9.33□□□□□ -0.92
PIK3C3-211ENST00000589550 NLRP7Q8WX94 980 aa9.33□□□□□ -0.92
PIK3C3-211ENST00000589550 ZNF330Q9Y3S2 320 aaPredicted RBP9.33□□□□□ -0.92
PIK3C3-211ENST00000589550 POTEB3A0JP26 581 aa9.32□□□□□ -0.92
PIK3C3-211ENST00000589550 POTEBQ6S5H4 581 aa9.32□□□□□ -0.92
PIK3C3-211ENST00000589550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.31□□□□□ -0.92
PIK3C3-211ENST00000589550 KDM4FA0A1W2PPD8 638 aa9.31□□□□□ -0.92
PIK3C3-211ENST00000589550 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
PIK3C3-211ENST00000589550 PRM3Q9NNZ6 103 aa9.31□□□□□ -0.92
PIK3C3-211ENST00000589550 SNRKQ9NRH2 765 aa9.31□□□□□ -0.92
PIK3C3-211ENST00000589550 HOXB3P14651 431 aaPredicted RBP9.29□□□□□ -0.92
PIK3C3-211ENST00000589550 PRSS12P56730 875 aa9.29□□□□□ -0.92
PIK3C3-211ENST00000589550 RIC3Q7Z5B4 369 aa9.29□□□□□ -0.92
PIK3C3-211ENST00000589550 LIMD1Q9UGP4 676 aa9.29□□□□□ -0.92
PIK3C3-211ENST00000589550 HOXB1P14653 301 aaPredicted RBP9.28□□□□□ -0.92
PIK3C3-211ENST00000589550 DOK7Q18PE1 504 aa9.28□□□□□ -0.92
PIK3C3-211ENST00000589550 SPTLC1O15269 473 aa9.27□□□□□ -0.93
PIK3C3-211ENST00000589550 PPP1R15AO75807 674 aaPredicted RBP9.27□□□□□ -0.93
PIK3C3-211ENST00000589550 GJA5P36382 358 aa9.27□□□□□ -0.93
PIK3C3-211ENST00000589550 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
PIK3C3-211ENST00000589550 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
PIK3C3-211ENST00000589550 SPIRE2Q8WWL2 714 aa9.27□□□□□ -0.93
PIK3C3-211ENST00000589550 CD46P15529 392 aa9.26□□□□□ -0.93
PIK3C3-211ENST00000589550 PDE4CQ08493 712 aa9.26□□□□□ -0.93
PIK3C3-211ENST00000589550 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
PIK3C3-211ENST00000589550 MTMR14Q8NCE2 650 aa9.26□□□□□ -0.93
PIK3C3-211ENST00000589550 CDCA7LQ96GN5 454 aa9.26□□□□□ -0.93
PIK3C3-211ENST00000589550 RIMBP2O15034 1052 aa9.24□□□□□ -0.93
PIK3C3-211ENST00000589550 RSBN1LQ6PCB5 846 aaPredicted RBP9.24□□□□□ -0.93
PIK3C3-211ENST00000589550 NUTM1Q86Y26 1132 aa9.24□□□□□ -0.93
PIK3C3-211ENST00000589550 GDPD2Q9HCC8 539 aa9.24□□□□□ -0.93
PIK3C3-211ENST00000589550 RCCD1A6NED2 376 aa9.23□□□□□ -0.93
PIK3C3-211ENST00000589550 FBXO31Q5XUX0 539 aaPredicted RBP9.23□□□□□ -0.93
PIK3C3-211ENST00000589550 RETREG2Q8NC44 543 aa9.23□□□□□ -0.93
PIK3C3-211ENST00000589550 ADAM33Q9BZ11 813 aa9.23□□□□□ -0.93
PIK3C3-211ENST00000589550 CALR3Q96L12 384 aaKnown RBP9.22□□□□□ -0.93
PIK3C3-211ENST00000589550 AEBP1Q8IUX7 1158 aa9.21□□□□□ -0.94
PIK3C3-211ENST00000589550 EYA1Q99502 592 aa9.21□□□□□ -0.94
PIK3C3-211ENST00000589550 ZSWIM6Q9HCJ5 1215 aa9.21□□□□□ -0.94
PIK3C3-211ENST00000589550 ERBB3P21860 1342 aa9.21□□□□□ -0.94
PIK3C3-211ENST00000589550 LILRB3O75022 631 aa9.2□□□□□ -0.94
PIK3C3-211ENST00000589550 ABL2P42684 1182 aa9.2□□□□□ -0.94
PIK3C3-211ENST00000589550 ACIN1Q9UKV3 1341 aaKnown RBP9.2□□□□□ -0.94
PIK3C3-211ENST00000589550 DNAJB2P25686 324 aa9.19□□□□□ -0.94
PIK3C3-211ENST00000589550 GLMNQ92990 594 aa9.19□□□□□ -0.94
PIK3C3-211ENST00000589550 PATL2C9JE40 543 aaKnown RBP9.18□□□□□ -0.94
PIK3C3-211ENST00000589550 PRPF38BQ5VTL8 546 aaKnown RBP9.18□□□□□ -0.94
PIK3C3-211ENST00000589550 MOXD2PA6NHM9 499 aa9.17□□□□□ -0.94
PIK3C3-211ENST00000589550 DDX11L8A8MPP1 907 aa9.17□□□□□ -0.94
PIK3C3-211ENST00000589550 NBPF26B4DH59 902 aa9.17□□□□□ -0.94
PIK3C3-211ENST00000589550 AP1G2O75843 785 aa9.17□□□□□ -0.94
PIK3C3-211ENST00000589550 CSPP1Q1MSJ5 1256 aa9.17□□□□□ -0.94
PIK3C3-211ENST00000589550 RNF166Q96A37 237 aaPredicted RBP9.17□□□□□ -0.94
PIK3C3-211ENST00000589550 PSDA5PKW4 1024 aaPredicted RBP9.16□□□□□ -0.94
PIK3C3-211ENST00000589550 NUDT7P0C024 238 aa9.16□□□□□ -0.94
PIK3C3-211ENST00000589550 USP17L8P0C7I0 530 aa9.16□□□□□ -0.94
PIK3C3-211ENST00000589550 QPCTQ16769 361 aa9.16□□□□□ -0.94
PIK3C3-211ENST00000589550 FAM198AQ9UFP1 575 aa9.16□□□□□ -0.94
PIK3C3-211ENST00000589550 TBC1D2BQ9UPU7 963 aa9.16□□□□□ -0.94
PIK3C3-211ENST00000589550 NDUFB9Q9Y6M9 179 aa9.16□□□□□ -0.94
PIK3C3-211ENST00000589550 USP46P62068 366 aa9.15□□□□□ -0.94
PIK3C3-211ENST00000589550 TMEM134Q9H6X4 195 aa9.15□□□□□ -0.94
PIK3C3-211ENST00000589550 NUTM2BA6NNL0 878 aaPredicted RBP9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 NUTM2EB1AL46 878 aaPredicted RBP9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 PPP1R3GB7ZBB8 358 aa9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 WASHC4Q2M389 1173 aa9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 PPP4R3BQ5MIZ7 849 aa9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 TMCO4Q5TGY1 634 aa9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 NUTM2DQ5VT03 806 aaPredicted RBP9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 NUDT18Q6ZVK8 323 aa9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 NUTM2AQ8IVF1 878 aaPredicted RBP9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 ZBTB3Q9H5J0 574 aa9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 BCL2L12Q9HB09 334 aa9.14□□□□□ -0.95
PIK3C3-211ENST00000589550 POM121CA8CG34 1229 aa9.13□□□□□ -0.95
PIK3C3-211ENST00000589550 NDUFV2P19404 249 aa9.13□□□□□ -0.95
PIK3C3-211ENST00000589550 IRF5Q13568 498 aa9.13□□□□□ -0.95
PIK3C3-211ENST00000589550 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
PIK3C3-211ENST00000589550 PBXIP1Q96AQ6 731 aa9.13□□□□□ -0.95
PIK3C3-211ENST00000589550 TSKSQ9UJT2 592 aa9.13□□□□□ -0.95
PIK3C3-211ENST00000589550 KDM4AO75164 1064 aa9.12□□□□□ -0.95
PIK3C3-211ENST00000589550 COL9A1P20849 921 aa9.12□□□□□ -0.95
PIK3C3-211ENST00000589550 VARS2Q5ST30 1063 aaKnown RBP9.12□□□□□ -0.95
PIK3C3-211ENST00000589550 ZNF687Q8N1G0 1237 aa9.12□□□□□ -0.95
PIK3C3-211ENST00000589550 MYT1LQ9UL68 1186 aa9.12□□□□□ -0.95
PIK3C3-211ENST00000589550 PTPREP23469 700 aa9.11□□□□□ -0.95
PIK3C3-211ENST00000589550 ARSIQ5FYB1 569 aa9.11□□□□□ -0.95
PIK3C3-211ENST00000589550 RSPH4AQ5TD94 716 aa9.11□□□□□ -0.95
PIK3C3-211ENST00000589550 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
PIK3C3-211ENST00000589550 RDH13Q8NBN7 331 aa9.11□□□□□ -0.95
PIK3C3-211ENST00000589550 TATDN2Q93075 761 aa9.11□□□□□ -0.95
PIK3C3-211ENST00000589550 PNMA3Q9UL41 463 aa9.11□□□□□ -0.95
PIK3C3-211ENST00000589550 USTQ9Y2C2 406 aa9.11□□□□□ -0.95
PIK3C3-211ENST00000589550 PCDHB15Q9Y5E8 787 aa9.11□□□□□ -0.95
PIK3C3-211ENST00000589550 TRIM6-TRIM34B2RNG4 842 aa9.1□□□□□ -0.95
PIK3C3-211ENST00000589550 GJD4Q96KN9 370 aaPredicted RBP9.1□□□□□ -0.95
PIK3C3-211ENST00000589550 GPR153Q6NV75 609 aa9.09□□□□□ -0.95
PIK3C3-211ENST00000589550 CABLES1Q8TDN4 633 aa9.09□□□□□ -0.95
PIK3C3-211ENST00000589550 HOXA2O43364 376 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms