RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 NUP155O75694 1391 aa14.48□□□□□ -0.09
APOC1-204ENST00000589078 TET3O43151 1660 aa14.48□□□□□ -0.09
APOC1-204ENST00000589078 NKTRP30414 1462 aaKnown RBP14.47□□□□□ -0.09
APOC1-204ENST00000589078 RBM33Q96EV2 1170 aaKnown RBP14.47□□□□□ -0.09
APOC1-204ENST00000589078 ACIN1Q9UKV3 1341 aaKnown RBP14.45□□□□□ -0.1
APOC1-204ENST00000589078 COL16A1Q07092 1604 aaPredicted RBP14.45□□□□□ -0.1
APOC1-204ENST00000589078 PROSER2Q86WR7 435 aaPredicted RBP14.45□□□□□ -0.1
APOC1-204ENST00000589078 UNC13BO14795 1591 aa14.44□□□□□ -0.1
APOC1-204ENST00000589078 KCNA6P17658 529 aa14.44□□□□□ -0.1
APOC1-204ENST00000589078 SLC26A8Q96RN1 970 aa14.44□□□□□ -0.1
APOC1-204ENST00000589078 STAG3Q9UJ98 1225 aa14.44□□□□□ -0.1
APOC1-204ENST00000589078 ADGRB3O60242 1522 aa14.44□□□□□ -0.1
APOC1-204ENST00000589078 RPRD2Q5VT52 1461 aaKnown RBP14.44□□□□□ -0.1
APOC1-204ENST00000589078 TRIM52Q96A61 297 aa14.43□□□□□ -0.1
APOC1-204ENST00000589078 MSH6P52701 1360 aa14.43□□□□□ -0.1
APOC1-204ENST00000589078 JCADQ9P266 1359 aa14.43□□□□□ -0.1
APOC1-204ENST00000589078 LRP6O75581 1613 aa14.42□□□□□ -0.1
APOC1-204ENST00000589078 GCC2Q8IWJ2 1684 aa14.4□□□□□ -0.1
APOC1-204ENST00000589078 SLC52A1Q9NWF4 448 aa14.4□□□□□ -0.1
APOC1-204ENST00000589078 CHD2O14647 1828 aaKnown RBP14.4□□□□□ -0.1
APOC1-204ENST00000589078 SRCAPQ6ZRS2 3230 aa14.4□□□□□ -0.1
APOC1-204ENST00000589078 MYO5BQ9ULV0 1848 aa14.39□□□□□ -0.11
APOC1-204ENST00000589078 IDI1Q13907 227 aa14.39□□□□□ -0.11
APOC1-204ENST00000589078 IQGAP3Q86VI3 1631 aa14.39□□□□□ -0.11
APOC1-204ENST00000589078 SHPRHQ149N8 1683 aa14.39□□□□□ -0.11
APOC1-204ENST00000589078 SLAIN2Q9P270 581 aa14.38□□□□□ -0.11
APOC1-204ENST00000589078 NOS1P29475 1434 aa14.38□□□□□ -0.11
APOC1-204ENST00000589078 SETD5Q9C0A6 1442 aa14.38□□□□□ -0.11
APOC1-204ENST00000589078 UPF1Q92900 1129 aaKnown RBP eCLIP14.37□□□□□ -0.11
APOC1-204ENST00000589078 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
APOC1-204ENST00000589078 AHDC1Q5TGY3 1603 aaPredicted RBP14.36□□□□□ -0.11
APOC1-204ENST00000589078 BCANQ96GW7 911 aa14.35□□□□□ -0.11
APOC1-204ENST00000589078 MEX3CQ5U5Q3 659 aaKnown RBP14.34□□□□□ -0.11
APOC1-204ENST00000589078 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.34□□□□□ -0.11
APOC1-204ENST00000589078 SPATA31A6Q5VVP1 1343 aa14.34□□□□□ -0.11
APOC1-204ENST00000589078 ZFYVE9O95405 1425 aa14.33□□□□□ -0.11
APOC1-204ENST00000589078 PLEKHG1Q9ULL1 1385 aa14.33□□□□□ -0.12
APOC1-204ENST00000589078 ZNF772Q68DY9 489 aaPredicted RBP14.32□□□□□ -0.12
APOC1-204ENST00000589078 RAB3GAP2Q9H2M9 1393 aa14.32□□□□□ -0.12
APOC1-204ENST00000589078 DIP2AQ14689 1571 aa14.31□□□□□ -0.12
APOC1-204ENST00000589078 TMEM131LA2VDJ0 1609 aa14.31□□□□□ -0.12
APOC1-204ENST00000589078 CHGAP10645 457 aaKnown RBP14.3□□□□□ -0.12
APOC1-204ENST00000589078 HRCP23327 699 aa14.3□□□□□ -0.12
APOC1-204ENST00000589078 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
APOC1-204ENST00000589078 RIMS2Q9UQ26 1411 aa14.3□□□□□ -0.12
APOC1-204ENST00000589078 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
APOC1-204ENST00000589078 NCOA3Q9Y6Q9 1424 aa14.29□□□□□ -0.12
APOC1-204ENST00000589078 CDK12Q9NYV4 1490 aaPredicted RBP14.29□□□□□ -0.12
APOC1-204ENST00000589078 E9PCH4 1651 aa14.29□□□□□ -0.12
APOC1-204ENST00000589078 PPP1R15AO75807 674 aaPredicted RBP14.28□□□□□ -0.12
APOC1-204ENST00000589078 C14orf37Q86TY3 774 aa14.28□□□□□ -0.12
APOC1-204ENST00000589078 RXRBP28702 533 aa14.27□□□□□ -0.13
APOC1-204ENST00000589078 ADAMTS13Q76LX8 1427 aa14.25□□□□□ -0.13
APOC1-204ENST00000589078 TRIM26Q12899 539 aaPredicted RBP14.25□□□□□ -0.13
APOC1-204ENST00000589078 CADPS2Q86UW7 1296 aa14.25□□□□□ -0.13
APOC1-204ENST00000589078 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.25□□□□□ -0.13
APOC1-204ENST00000589078 NHSL1Q5SYE7 1610 aa14.25□□□□□ -0.13
APOC1-204ENST00000589078 NUTM2BA6NNL0 878 aaPredicted RBP14.24□□□□□ -0.13
APOC1-204ENST00000589078 NUTM2EB1AL46 878 aaPredicted RBP14.24□□□□□ -0.13
APOC1-204ENST00000589078 ATF3P18847 181 aa14.24□□□□□ -0.13
APOC1-204ENST00000589078 NUTM2AQ8IVF1 878 aaPredicted RBP14.24□□□□□ -0.13
APOC1-204ENST00000589078 TBX22Q9Y458 520 aa14.24□□□□□ -0.13
APOC1-204ENST00000589078 TRPM2O94759 1503 aa14.24□□□□□ -0.13
APOC1-204ENST00000589078 ASXL1Q8IXJ9 1541 aa14.24□□□□□ -0.13
APOC1-204ENST00000589078 RGS12O14924 1447 aa14.24□□□□□ -0.13
APOC1-204ENST00000589078 AFF2P51816 1311 aa14.23□□□□□ -0.13
APOC1-204ENST00000589078 ZNF326Q5BKZ1 582 aaKnown RBP14.23□□□□□ -0.13
APOC1-204ENST00000589078 FOXD1Q16676 465 aa14.22□□□□□ -0.13
APOC1-204ENST00000589078 BRINP3Q76B58 766 aa14.22□□□□□ -0.13
APOC1-204ENST00000589078 C19orf44Q9H6X5 657 aa14.22□□□□□ -0.13
APOC1-204ENST00000589078 CCDC144AA2RUR9 1427 aa14.21□□□□□ -0.13
APOC1-204ENST00000589078 SPHKAPQ2M3C7 1700 aa14.21□□□□□ -0.14
APOC1-204ENST00000589078 PIK3R4Q99570 1358 aa14.21□□□□□ -0.14
APOC1-204ENST00000589078 EP400Q96L91 3159 aa14.2□□□□□ -0.14
APOC1-204ENST00000589078 NUTM2DQ5VT03 806 aaPredicted RBP14.2□□□□□ -0.14
APOC1-204ENST00000589078 XRN1Q8IZH2 1706 aaKnown RBP14.2□□□□□ -0.14
APOC1-204ENST00000589078 DCCP43146 1447 aa14.19□□□□□ -0.14
APOC1-204ENST00000589078 PTPRUQ92729 1446 aa14.19□□□□□ -0.14
APOC1-204ENST00000589078 MST1RQ04912 1400 aa14.17□□□□□ -0.14
APOC1-204ENST00000589078 NRXN3Q9Y4C0 1643 aa14.17□□□□□ -0.14
APOC1-204ENST00000589078 RPGRIP1LQ68CZ1 1315 aa14.16□□□□□ -0.14
APOC1-204ENST00000589078 CLTCL1P53675 1640 aa14.15□□□□□ -0.14
APOC1-204ENST00000589078 NALCNQ8IZF0 1738 aa14.15□□□□□ -0.14
APOC1-204ENST00000589078 C8orf37Q96NL8 207 aa14.15□□□□□ -0.14
APOC1-204ENST00000589078 AMOTL2Q9Y2J4 779 aa14.15□□□□□ -0.14
APOC1-204ENST00000589078 PNPLA6Q8IY17 1366 aa14.14□□□□□ -0.15
APOC1-204ENST00000589078 RBM6P78332 1123 aaKnown RBP14.14□□□□□ -0.15
APOC1-204ENST00000589078 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
APOC1-204ENST00000589078 VGFO15240 615 aaPredicted RBP14.13□□□□□ -0.15
APOC1-204ENST00000589078 QTRT2Q9H974 415 aaKnown RBP14.13□□□□□ -0.15
APOC1-204ENST00000589078 ATAD2Q6PL18 1390 aa14.11□□□□□ -0.15
APOC1-204ENST00000589078 ANKRD30BQ9BXX2 1392 aa14.11□□□□□ -0.15
APOC1-204ENST00000589078 RGL3Q3MIN7 710 aa14.11□□□□□ -0.15
APOC1-204ENST00000589078 DDX17Q92841 729 aaKnown RBP14.11□□□□□ -0.15
APOC1-204ENST00000589078 LRRC59Q96AG4 307 aaKnown RBP14.11□□□□□ -0.15
APOC1-204ENST00000589078 ADGRL3Q9HAR2 1447 aa14.1□□□□□ -0.15
APOC1-204ENST00000589078 LAMC1P11047 1609 aa14.1□□□□□ -0.15
APOC1-204ENST00000589078 SPATA31E1Q6ZUB1 1445 aa14.08□□□□□ -0.15
APOC1-204ENST00000589078 ADAMTS2O95450 1211 aa14.08□□□□□ -0.16
APOC1-204ENST00000589078 KIF1BO60333 1816 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms