RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
ZNF554-202ENST00000588534 ATF3P18847 181 aa9.9□□□□□ -0.82
ZNF554-202ENST00000588534 NBPF1Q3BBV0 1214 aa9.9□□□□□ -0.82
ZNF554-202ENST00000588534 MAPK8IP3Q9UPT6 1336 aa9.9□□□□□ -0.83
ZNF554-202ENST00000588534 PANK3Q9H999 370 aa9.9□□□□□ -0.83
ZNF554-202ENST00000588534 ATAD2Q6PL18 1390 aa9.9□□□□□ -0.83
ZNF554-202ENST00000588534 CEBPAP49715 358 aaPredicted RBP9.89□□□□□ -0.83
ZNF554-202ENST00000588534 NOS1P29475 1434 aa9.89□□□□□ -0.83
ZNF554-202ENST00000588534 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.89□□□□□ -0.83
ZNF554-202ENST00000588534 ARHGAP31Q2M1Z3 1444 aa9.89□□□□□ -0.83
ZNF554-202ENST00000588534 PROSER2Q86WR7 435 aaPredicted RBP9.88□□□□□ -0.83
ZNF554-202ENST00000588534 PRAM1Q96QH2 718 aa9.88□□□□□ -0.83
ZNF554-202ENST00000588534 ZNF692Q9BU19 519 aaPredicted RBP9.88□□□□□ -0.83
ZNF554-202ENST00000588534 KIF7Q2M1P5 1343 aa9.88□□□□□ -0.83
ZNF554-202ENST00000588534 SCAF11Q99590 1463 aaKnown RBP9.88□□□□□ -0.83
ZNF554-202ENST00000588534 CDC42BPBQ9Y5S2 1711 aa9.88□□□□□ -0.83
ZNF554-202ENST00000588534 PPM1GO15355 546 aaPredicted RBP9.88□□□□□ -0.83
ZNF554-202ENST00000588534 CANXP27824 592 aaKnown RBP9.88□□□□□ -0.83
ZNF554-202ENST00000588534 RIMS2Q9UQ26 1411 aa9.87□□□□□ -0.83
ZNF554-202ENST00000588534 ADGRF5Q8IZF2 1346 aa9.87□□□□□ -0.83
ZNF554-202ENST00000588534 DIP2BQ9P265 1576 aa9.87□□□□□ -0.83
ZNF554-202ENST00000588534 KDM6BO15054 1643 aa9.87□□□□□ -0.83
ZNF554-202ENST00000588534 EIF2AK4Q9P2K8 1649 aaKnown RBP9.86□□□□□ -0.83
ZNF554-202ENST00000588534 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
ZNF554-202ENST00000588534 COG3Q96JB2 828 aa9.86□□□□□ -0.83
ZNF554-202ENST00000588534 PUS7Q96PZ0 661 aaKnown RBP9.86□□□□□ -0.83
ZNF554-202ENST00000588534 MYBBP1AQ9BQG0 1328 aaKnown RBP9.86□□□□□ -0.83
ZNF554-202ENST00000588534 NPATQ14207 1427 aa9.86□□□□□ -0.83
ZNF554-202ENST00000588534 RALGAPBQ86X10 1494 aa9.86□□□□□ -0.83
ZNF554-202ENST00000588534 SLC26A8Q96RN1 970 aa9.85□□□□□ -0.83
ZNF554-202ENST00000588534 PRAG1Q86YV5 1406 aa9.85□□□□□ -0.83
ZNF554-202ENST00000588534 ZBTB7CA1YPR0 619 aa9.85□□□□□ -0.83
ZNF554-202ENST00000588534 PTPRTO14522 1441 aa9.85□□□□□ -0.83
ZNF554-202ENST00000588534 UHRF1BP1Q6BDS2 1440 aa9.85□□□□□ -0.83
ZNF554-202ENST00000588534 TSPOAP1O95153 1857 aa9.85□□□□□ -0.83
ZNF554-202ENST00000588534 NINLQ9Y2I6 1382 aa9.85□□□□□ -0.83
ZNF554-202ENST00000588534 LRRIQ1Q96JM4 1722 aa9.85□□□□□ -0.83
ZNF554-202ENST00000588534 NGEFQ8N5V2 710 aa9.84□□□□□ -0.83
ZNF554-202ENST00000588534 TBX22Q9Y458 520 aa9.84□□□□□ -0.83
ZNF554-202ENST00000588534 AGLP35573 1532 aa9.84□□□□□ -0.83
ZNF554-202ENST00000588534 PSME1Q06323 249 aa9.84□□□□□ -0.83
ZNF554-202ENST00000588534 GPRASP1Q5JY77 1395 aa9.84□□□□□ -0.83
ZNF554-202ENST00000588534 EIF5BO60841 1220 aaKnown RBP9.84□□□□□ -0.83
ZNF554-202ENST00000588534 TNNT2P45379 298 aaPredicted RBP9.84□□□□□ -0.83
ZNF554-202ENST00000588534 U2SURPO15042 1029 aaKnown RBP9.83□□□□□ -0.84
ZNF554-202ENST00000588534 CALD1Q05682 793 aaKnown RBP9.83□□□□□ -0.84
ZNF554-202ENST00000588534 CROCC2H7BZ55 1655 aa9.83□□□□□ -0.84
ZNF554-202ENST00000588534 PRKRIP1Q9H875 184 aaPredicted RBP9.83□□□□□ -0.84
ZNF554-202ENST00000588534 CDK19Q9BWU1 502 aa9.83□□□□□ -0.84
ZNF554-202ENST00000588534 NLRP1Q9C000 1473 aa9.82□□□□□ -0.84
ZNF554-202ENST00000588534 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
ZNF554-202ENST00000588534 CHMP4AQ9BY43 222 aa9.82□□□□□ -0.84
ZNF554-202ENST00000588534 AMOTL2Q9Y2J4 779 aa9.82□□□□□ -0.84
ZNF554-202ENST00000588534 KDM5CP41229 1560 aa9.82□□□□□ -0.84
ZNF554-202ENST00000588534 TRPM2O94759 1503 aa9.82□□□□□ -0.84
ZNF554-202ENST00000588534 ABCC3O15438 1527 aa9.81□□□□□ -0.84
ZNF554-202ENST00000588534 LMTK2Q8IWU2 1503 aa9.81□□□□□ -0.84
ZNF554-202ENST00000588534 UNC13BO14795 1591 aa9.81□□□□□ -0.84
ZNF554-202ENST00000588534 CABP2Q9NPB3 220 aa9.81□□□□□ -0.84
ZNF554-202ENST00000588534 ZBTB47Q9UFB7 747 aaPredicted RBP9.81□□□□□ -0.84
ZNF554-202ENST00000588534 TET3O43151 1660 aa9.81□□□□□ -0.84
ZNF554-202ENST00000588534 INO80Q9ULG1 1556 aaPredicted RBP9.81□□□□□ -0.84
ZNF554-202ENST00000588534 IQGAP3Q86VI3 1631 aa9.81□□□□□ -0.84
ZNF554-202ENST00000588534 AMPHP49418 695 aa9.8□□□□□ -0.84
ZNF554-202ENST00000588534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.8□□□□□ -0.84
ZNF554-202ENST00000588534 SIRT1Q96EB6 747 aa9.8□□□□□ -0.84
ZNF554-202ENST00000588534 TMEM2Q9UHN6 1383 aa9.8□□□□□ -0.84
ZNF554-202ENST00000588534 ZMYM4Q5VZL5 1548 aa9.8□□□□□ -0.84
ZNF554-202ENST00000588534 NUTM2FA1L443 756 aa9.79□□□□□ -0.84
ZNF554-202ENST00000588534 ERVK-7P63135 1459 aa9.79□□□□□ -0.84
ZNF554-202ENST00000588534 EFCAB6Q5THR3 1501 aa9.79□□□□□ -0.84
ZNF554-202ENST00000588534 U2AF1L5P0DN76 240 aaPredicted RBP9.79□□□□□ -0.84
ZNF554-202ENST00000588534 U2AF1Q01081 240 aaKnown RBP eCLIP9.79□□□□□ -0.84
ZNF554-202ENST00000588534 LMOD3Q0VAK6 560 aa9.79□□□□□ -0.84
ZNF554-202ENST00000588534 PRDM15P57071 1507 aaPredicted RBP9.79□□□□□ -0.84
ZNF554-202ENST00000588534 WASLO00401 505 aaPredicted RBP9.78□□□□□ -0.84
ZNF554-202ENST00000588534 SALL2Q9Y467 1007 aaPredicted RBP9.78□□□□□ -0.84
ZNF554-202ENST00000588534 MAP3K4Q9Y6R4 1608 aa9.78□□□□□ -0.84
ZNF554-202ENST00000588534 LRPPRCP42704 1394 aaKnown RBP9.78□□□□□ -0.84
ZNF554-202ENST00000588534 DIP2CQ9Y2E4 1556 aa9.77□□□□□ -0.84
ZNF554-202ENST00000588534 PDE3BQ13370 1112 aa9.77□□□□□ -0.85
ZNF554-202ENST00000588534 NUDT16Q96DE0 195 aaKnown RBP9.77□□□□□ -0.85
ZNF554-202ENST00000588534 NPM2Q86SE8 214 aaKnown RBP9.77□□□□□ -0.85
ZNF554-202ENST00000588534 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
ZNF554-202ENST00000588534 RTF1Q92541 710 aaKnown RBP9.77□□□□□ -0.85
ZNF554-202ENST00000588534 PODXL2Q9NZ53 605 aa9.77□□□□□ -0.85
ZNF554-202ENST00000588534 BRD4O60885 1362 aaPredicted RBP9.76□□□□□ -0.85
ZNF554-202ENST00000588534 MS4A1P11836 297 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 ESCO1Q5FWF5 840 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 CADPS2Q86UW7 1296 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 ARHGEF40Q8TER5 1519 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 MYOM2P54296 1465 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 CSB-PGBD3P0DP91 1061 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 CABP1Q9NZU7 370 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 SPATA31E1Q6ZUB1 1445 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 SOX12O15370 315 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 TPRNQ4KMQ1 711 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 KLHL34Q8N239 644 aa9.76□□□□□ -0.85
ZNF554-202ENST00000588534 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
ZNF554-202ENST00000588534 ZFYVE9O95405 1425 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms