RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 DOK7Q18PE1 504 aa6.19□□□□□ -1.42
LDLRAD4-209ENST00000587440 TTC13Q8NBP0 860 aa6.19□□□□□ -1.42
LDLRAD4-209ENST00000587440 ZSWIM6Q9HCJ5 1215 aa6.19□□□□□ -1.42
LDLRAD4-209ENST00000587440 MROH2BQ7Z745 1585 aa6.18□□□□□ -1.42
LDLRAD4-209ENST00000587440 ADAM33Q9BZ11 813 aa6.18□□□□□ -1.42
LDLRAD4-209ENST00000587440 SHROOM2Q13796 1616 aa6.17□□□□□ -1.42
LDLRAD4-209ENST00000587440 COL17A1Q9UMD9 1497 aaPredicted RBP6.17□□□□□ -1.42
LDLRAD4-209ENST00000587440 C6orf132Q5T0Z8 1188 aa6.17□□□□□ -1.42
LDLRAD4-209ENST00000587440 MAMSTRQ6ZN01 415 aa6.17□□□□□ -1.42
LDLRAD4-209ENST00000587440 DNMBPQ6XZF7 1577 aa6.17□□□□□ -1.42
LDLRAD4-209ENST00000587440 POTEMA6NI47 508 aa6.16□□□□□ -1.42
LDLRAD4-209ENST00000587440 MS4A1P11836 297 aa6.16□□□□□ -1.42
LDLRAD4-209ENST00000587440 GIGYF2Q6Y7W6 1299 aaKnown RBP6.16□□□□□ -1.42
LDLRAD4-209ENST00000587440 ZNF454Q8N9F8 522 aa6.16□□□□□ -1.42
LDLRAD4-209ENST00000587440 ZDHHC16Q969W1 377 aa6.16□□□□□ -1.42
LDLRAD4-209ENST00000587440 DAXXQ9UER7 740 aaPredicted RBP6.16□□□□□ -1.42
LDLRAD4-209ENST00000587440 ADAMTSL3P82987 1691 aa6.16□□□□□ -1.42
LDLRAD4-209ENST00000587440 GLI2P10070 1586 aa6.15□□□□□ -1.42
LDLRAD4-209ENST00000587440 TTLL12Q14166 644 aaPredicted RBP6.15□□□□□ -1.42
LDLRAD4-209ENST00000587440 PADI6Q6TGC4 694 aa6.15□□□□□ -1.42
LDLRAD4-209ENST00000587440 METTL3Q86U44 580 aaKnown RBP6.15□□□□□ -1.42
LDLRAD4-209ENST00000587440 DDRGK1Q96HY6 314 aa6.15□□□□□ -1.42
LDLRAD4-209ENST00000587440 SCUBE2Q9NQ36 999 aa6.15□□□□□ -1.42
LDLRAD4-209ENST00000587440 RBM27Q9P2N5 1060 aaKnown RBP6.15□□□□□ -1.42
LDLRAD4-209ENST00000587440 LHX6Q9UPM6 363 aa6.15□□□□□ -1.42
LDLRAD4-209ENST00000587440 ADGRG1Q9Y653 693 aa6.15□□□□□ -1.42
LDLRAD4-209ENST00000587440 SUPT5HO00267 1087 aaKnown RBP6.14□□□□□ -1.43
LDLRAD4-209ENST00000587440 FAM161AQ3B820 660 aa6.14□□□□□ -1.43
LDLRAD4-209ENST00000587440 POTEGQ6S5H5 508 aa6.14□□□□□ -1.43
LDLRAD4-209ENST00000587440 FAM198AQ9UFP1 575 aa6.14□□□□□ -1.43
LDLRAD4-209ENST00000587440 GRIN2BQ13224 1484 aa6.14□□□□□ -1.43
LDLRAD4-209ENST00000587440 TEX14Q8IWB6 1497 aa6.14□□□□□ -1.43
LDLRAD4-209ENST00000587440 LTBP4Q8N2S1 1624 aa6.14□□□□□ -1.43
LDLRAD4-209ENST00000587440 COL9A1P20849 921 aa6.13□□□□□ -1.43
LDLRAD4-209ENST00000587440 PCDH10Q9P2E7 1040 aa6.13□□□□□ -1.43
LDLRAD4-209ENST00000587440 RIMBP2O15034 1052 aa6.12□□□□□ -1.43
LDLRAD4-209ENST00000587440 POLA1P09884 1462 aaPredicted RBP6.12□□□□□ -1.43
LDLRAD4-209ENST00000587440 HOXB1P14653 301 aaPredicted RBP6.12□□□□□ -1.43
LDLRAD4-209ENST00000587440 PXYLP1Q8TE99 480 aa6.12□□□□□ -1.43
LDLRAD4-209ENST00000587440 ARXQ96QS3 562 aa6.12□□□□□ -1.43
LDLRAD4-209ENST00000587440 BCL2L12Q9HB09 334 aa6.12□□□□□ -1.43
LDLRAD4-209ENST00000587440 KIF21BO75037 1637 aa6.11□□□□□ -1.43
LDLRAD4-209ENST00000587440 ADCY10Q96PN6 1610 aa6.11□□□□□ -1.43
LDLRAD4-209ENST00000587440 TDRD9Q8NDG6 1382 aaKnown RBP6.11□□□□□ -1.43
LDLRAD4-209ENST00000587440 C3orf80F5H4A9 247 aa6.11□□□□□ -1.43
LDLRAD4-209ENST00000587440 HSPA2P54652 639 aa6.11□□□□□ -1.43
LDLRAD4-209ENST00000587440 PRSS12P56730 875 aa6.11□□□□□ -1.43
LDLRAD4-209ENST00000587440 MDM2Q00987 491 aaPredicted RBP6.11□□□□□ -1.43
LDLRAD4-209ENST00000587440 NLRP7Q8WX94 980 aa6.11□□□□□ -1.43
LDLRAD4-209ENST00000587440 CLCN1P35523 988 aa6.1□□□□□ -1.43
LDLRAD4-209ENST00000587440 CDCA7LQ96GN5 454 aa6.1□□□□□ -1.43
LDLRAD4-209ENST00000587440 GOPCQ9HD26 462 aa6.1□□□□□ -1.43
LDLRAD4-209ENST00000587440 GPCPD1Q9NPB8 672 aa6.1□□□□□ -1.43
LDLRAD4-209ENST00000587440 ONECUT3O60422 494 aaPredicted RBP6.09□□□□□ -1.43
LDLRAD4-209ENST00000587440 PPP4R3BQ5MIZ7 849 aa6.09□□□□□ -1.43
LDLRAD4-209ENST00000587440 ZNF710Q8N1W2 664 aa6.09□□□□□ -1.43
LDLRAD4-209ENST00000587440 FAM217BQ9NTX9 383 aaPredicted RBP6.09□□□□□ -1.43
LDLRAD4-209ENST00000587440 TSKSQ9UJT2 592 aa6.09□□□□□ -1.43
LDLRAD4-209ENST00000587440 KIAA0586Q9BVV6 1533 aa6.09□□□□□ -1.44
LDLRAD4-209ENST00000587440 PTPRTO14522 1441 aa6.08□□□□□ -1.44
LDLRAD4-209ENST00000587440 NUP160Q12769 1436 aa6.08□□□□□ -1.44
LDLRAD4-209ENST00000587440 PPP1R3GB7ZBB8 358 aa6.08□□□□□ -1.44
LDLRAD4-209ENST00000587440 OATP04181 439 aa6.08□□□□□ -1.44
LDLRAD4-209ENST00000587440 EYA1Q99502 592 aa6.08□□□□□ -1.44
LDLRAD4-209ENST00000587440 YEATS2Q9ULM3 1422 aa6.08□□□□□ -1.44
LDLRAD4-209ENST00000587440 PSDA5PKW4 1024 aaPredicted RBP6.07□□□□□ -1.44
LDLRAD4-209ENST00000587440 ZMYND15Q9H091 742 aa6.07□□□□□ -1.44
LDLRAD4-209ENST00000587440 MAP3K4Q9Y6R4 1608 aa6.07□□□□□ -1.44
LDLRAD4-209ENST00000587440 SNPHO15079 494 aa6.06□□□□□ -1.44
LDLRAD4-209ENST00000587440 SSTR3P32745 418 aaPredicted RBP6.06□□□□□ -1.44
LDLRAD4-209ENST00000587440 SH3D19Q5HYK7 790 aa6.06□□□□□ -1.44
LDLRAD4-209ENST00000587440 LCE2DQ5TA82 110 aaPredicted RBP6.06□□□□□ -1.44
LDLRAD4-209ENST00000587440 CFAP43Q8NDM7 1665 aa6.06□□□□□ -1.44
LDLRAD4-209ENST00000587440 MADDQ8WXG6 1647 aa6.06□□□□□ -1.44
LDLRAD4-209ENST00000587440 GRIN2AQ12879 1464 aa6.05□□□□□ -1.44
LDLRAD4-209ENST00000587440 PLB1Q6P1J6 1458 aa6.05□□□□□ -1.44
LDLRAD4-209ENST00000587440 POTEEQ6S8J3 1075 aa6.05□□□□□ -1.44
LDLRAD4-209ENST00000587440 BCORL1Q5H9F3 1711 aa6.05□□□□□ -1.44
LDLRAD4-209ENST00000587440 PBRM1Q86U86 1689 aa6.04□□□□□ -1.44
LDLRAD4-209ENST00000587440 RAD54L2Q9Y4B4 1467 aa6.04□□□□□ -1.44
LDLRAD4-209ENST00000587440 TRIM6-TRIM34B2RNG4 842 aa6.04□□□□□ -1.44
LDLRAD4-209ENST00000587440 PTPREP23469 700 aa6.04□□□□□ -1.44
LDLRAD4-209ENST00000587440 BEGAINQ9BUH8 593 aa6.04□□□□□ -1.44
LDLRAD4-209ENST00000587440 SOGA1O94964 1423 aa6.04□□□□□ -1.44
LDLRAD4-209ENST00000587440 PRG4Q92954 1404 aaPredicted RBP6.04□□□□□ -1.44
LDLRAD4-209ENST00000587440 STRCQ7RTU9 1775 aa6.03□□□□□ -1.44
LDLRAD4-209ENST00000587440 RCCD1A6NED2 376 aa6.03□□□□□ -1.44
LDLRAD4-209ENST00000587440 PROX2Q3B8N5 592 aa6.03□□□□□ -1.44
LDLRAD4-209ENST00000587440 HOMEZQ8IX15 550 aa6.03□□□□□ -1.44
LDLRAD4-209ENST00000587440 RBM46Q8TBY0 533 aaKnown RBP6.03□□□□□ -1.44
LDLRAD4-209ENST00000587440 FAM163AQ96GL9 167 aaPredicted RBP6.03□□□□□ -1.44
LDLRAD4-209ENST00000587440 RSPH6AQ9H0K4 717 aa6.03□□□□□ -1.44
LDLRAD4-209ENST00000587440 C1orf115Q9H7X2 142 aa6.03□□□□□ -1.44
LDLRAD4-209ENST00000587440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.02□□□□□ -1.45
LDLRAD4-209ENST00000587440 UBAP1LF5GYI3 381 aa6.02□□□□□ -1.45
LDLRAD4-209ENST00000587440 PCMTD1Q96MG8 357 aaPredicted RBP6.02□□□□□ -1.45
LDLRAD4-209ENST00000587440 KCNK17Q96T54 332 aa6.02□□□□□ -1.45
LDLRAD4-209ENST00000587440 CD46P15529 392 aa6.01□□□□□ -1.45
LDLRAD4-209ENST00000587440 SKIV2LQ15477 1246 aaKnown RBP6.01□□□□□ -1.45
LDLRAD4-209ENST00000587440 MYSM1Q5VVJ2 828 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms