RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 PREX1Q8TCU6 1659 aa30.82■■■□□ 2.52
CIRBP-208ENST00000586548 SCAF11Q99590 1463 aaKnown RBP30.79■■■□□ 2.52
CIRBP-208ENST00000586548 POLR3GLQ9BT43 218 aa30.78■■■□□ 2.52
CIRBP-208ENST00000586548 RPGRIP1LQ68CZ1 1315 aa30.78■■■□□ 2.52
CIRBP-208ENST00000586548 CHGAP10645 457 aaKnown RBP30.76■■■□□ 2.52
CIRBP-208ENST00000586548 TESK2Q96S53 571 aa30.76■■■□□ 2.52
CIRBP-208ENST00000586548 ADGRF5Q8IZF2 1346 aa30.76■■■□□ 2.51
CIRBP-208ENST00000586548 PRKRIP1Q9H875 184 aaPredicted RBP30.76■■■□□ 2.51
CIRBP-208ENST00000586548 SLC52A1Q9NWF4 448 aa30.73■■■□□ 2.51
CIRBP-208ENST00000586548 CLTCQ00610 1675 aaKnown RBP30.72■■■□□ 2.51
CIRBP-208ENST00000586548 EIF3AQ14152 1382 aaKnown RBP30.7■■■□□ 2.5
CIRBP-208ENST00000586548 SETBP1Q9Y6X0 1596 aa30.7■■■□□ 2.5
CIRBP-208ENST00000586548 ERVK-7P63135 1459 aa30.69■■■□□ 2.5
CIRBP-208ENST00000586548 PIK3C2GO75747 1445 aa30.69■■■□□ 2.5
CIRBP-208ENST00000586548 DISP3Q9P2K9 1392 aa30.68■■■□□ 2.5
CIRBP-208ENST00000586548 SCAF1Q9H7N4 1312 aaKnown RBP30.68■■■□□ 2.5
CIRBP-208ENST00000586548 NEXMIFQ5QGS0 1516 aa30.68■■■□□ 2.5
CIRBP-208ENST00000586548 TMF1P82094 1093 aa30.67■■■□□ 2.5
CIRBP-208ENST00000586548 CFAP70Q5T0N1 1121 aa30.67■■■□□ 2.5
CIRBP-208ENST00000586548 IDI1Q13907 227 aa30.65■■■□□ 2.5
CIRBP-208ENST00000586548 TMEM131LA2VDJ0 1609 aa30.64■■■□□ 2.5
CIRBP-208ENST00000586548 SPATA31D1Q6ZQQ2 1576 aa30.61■■■□□ 2.49
CIRBP-208ENST00000586548 MYO5BQ9ULV0 1848 aa30.61■■■□□ 2.49
CIRBP-208ENST00000586548 ZFYVE9O95405 1425 aa30.59■■■□□ 2.49
CIRBP-208ENST00000586548 MYO3AQ8NEV4 1616 aa30.59■■■□□ 2.49
CIRBP-208ENST00000586548 C14orf93Q9H972 538 aaKnown RBP30.59■■■□□ 2.49
CIRBP-208ENST00000586548 VGFO15240 615 aaPredicted RBP30.58■■■□□ 2.49
CIRBP-208ENST00000586548 FBXO31Q5XUX0 539 aaPredicted RBP30.57■■■□□ 2.48
CIRBP-208ENST00000586548 ADGRB1O14514 1584 aa30.56■■■□□ 2.48
CIRBP-208ENST00000586548 SLC24A1O60721 1099 aa30.55■■■□□ 2.48
CIRBP-208ENST00000586548 MLECQ14165 292 aa30.55■■■□□ 2.48
CIRBP-208ENST00000586548 CDCA8Q53HL2 280 aa30.54■■■□□ 2.48
CIRBP-208ENST00000586548 KTN1Q86UP2 1357 aaKnown RBP30.54■■■□□ 2.48
CIRBP-208ENST00000586548 GTF3C3Q9Y5Q9 886 aa30.52■■■□□ 2.48
CIRBP-208ENST00000586548 SBNO2Q9Y2G9 1366 aa30.49■■■□□ 2.47
CIRBP-208ENST00000586548 CCDC184Q52MB2 194 aa30.49■■■□□ 2.47
CIRBP-208ENST00000586548 MRS2Q9HD23 443 aa30.49■■■□□ 2.47
CIRBP-208ENST00000586548 ESF1Q9H501 851 aaKnown RBP30.48■■■□□ 2.47
CIRBP-208ENST00000586548 KDM5AP29375 1690 aaKnown RBP30.48■■■□□ 2.47
CIRBP-208ENST00000586548 PER1O15534 1290 aaPredicted RBP30.44■■■□□ 2.46
CIRBP-208ENST00000586548 RALBP1Q15311 655 aa30.44■■■□□ 2.46
CIRBP-208ENST00000586548 ZMYM3Q14202 1370 aa30.44■■■□□ 2.46
CIRBP-208ENST00000586548 MYOM1P52179 1685 aa30.43■■■□□ 2.46
CIRBP-208ENST00000586548 NUTM2DQ5VT03 806 aaPredicted RBP30.42■■■□□ 2.46
CIRBP-208ENST00000586548 CENPJQ9HC77 1338 aaPredicted RBP30.41■■■□□ 2.46
CIRBP-208ENST00000586548 A2ML1A8K2U0 1454 aa30.41■■■□□ 2.46
CIRBP-208ENST00000586548 QRICH2Q9H0J4 1663 aa30.41■■■□□ 2.46
CIRBP-208ENST00000586548 PANK3Q9H999 370 aa30.41■■■□□ 2.46
CIRBP-208ENST00000586548 STAG3Q9UJ98 1225 aa30.39■■■□□ 2.46
CIRBP-208ENST00000586548 PARD3Q8TEW0 1356 aa30.38■■■□□ 2.45
CIRBP-208ENST00000586548 ARHGEF28Q8N1W1 1705 aaKnown RBP30.38■■■□□ 2.45
CIRBP-208ENST00000586548 TMEM132EQ6IEE7 984 aa30.37■■■□□ 2.45
CIRBP-208ENST00000586548 MYBBP1AQ9BQG0 1328 aaKnown RBP30.37■■■□□ 2.45
CIRBP-208ENST00000586548 TRAK1Q9UPV9 953 aa30.36■■■□□ 2.45
CIRBP-208ENST00000586548 CNGB1Q14028 1251 aaPredicted RBP30.36■■■□□ 2.45
CIRBP-208ENST00000586548 ASXL1Q8IXJ9 1541 aa30.35■■■□□ 2.45
CIRBP-208ENST00000586548 BRD4O60885 1362 aaPredicted RBP30.33■■■□□ 2.45
CIRBP-208ENST00000586548 HNRNPUQ00839 825 aaKnown RBP eCLIP30.33■■■□□ 2.45
CIRBP-208ENST00000586548 TNRQ92752 1358 aa30.31■■■□□ 2.44
CIRBP-208ENST00000586548 FAM9BQ8IZU0 186 aa30.31■■■□□ 2.44
CIRBP-208ENST00000586548 RIMS2Q9UQ26 1411 aa30.31■■■□□ 2.44
CIRBP-208ENST00000586548 ALKQ9UM73 1620 aa30.3■■■□□ 2.44
CIRBP-208ENST00000586548 TMC1Q8TDI8 760 aa30.26■■■□□ 2.43
CIRBP-208ENST00000586548 KNSTRNQ9Y448 316 aa30.25■■■□□ 2.43
CIRBP-208ENST00000586548 NLRP13Q86W25 1043 aa30.24■■■□□ 2.43
CIRBP-208ENST00000586548 YTHDC2Q9H6S0 1430 aaKnown RBP30.22■■■□□ 2.43
CIRBP-208ENST00000586548 FER1L4A9Z1Z3 1794 aa30.21■■■□□ 2.43
CIRBP-208ENST00000586548 NPC1L1Q9UHC9 1359 aa30.21■■■□□ 2.43
CIRBP-208ENST00000586548 SETD1AO15047 1707 aaKnown RBP30.21■■■□□ 2.43
CIRBP-208ENST00000586548 UBR1Q8IWV7 1749 aa30.21■■■□□ 2.43
CIRBP-208ENST00000586548 CC2D1BQ5T0F9 858 aaKnown RBP30.21■■■□□ 2.43
CIRBP-208ENST00000586548 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.21■■■□□ 2.43
CIRBP-208ENST00000586548 PNISRQ8TF01 805 aaKnown RBP30.2■■■□□ 2.43
CIRBP-208ENST00000586548 PUS7Q96PZ0 661 aaKnown RBP30.19■■■□□ 2.42
CIRBP-208ENST00000586548 PTPRMP28827 1452 aa30.19■■■□□ 2.42
CIRBP-208ENST00000586548 C3P01024 1663 aa30.18■■■□□ 2.42
CIRBP-208ENST00000586548 TULP4Q9NRJ4 1543 aa30.18■■■□□ 2.42
CIRBP-208ENST00000586548 NLRP1Q9C000 1473 aa30.18■■■□□ 2.42
CIRBP-208ENST00000586548 AMER1Q5JTC6 1135 aaPredicted RBP30.17■■■□□ 2.42
CIRBP-208ENST00000586548 EVC2Q86UK5 1308 aa30.16■■■□□ 2.42
CIRBP-208ENST00000586548 NRXN3Q9Y4C0 1643 aa30.15■■■□□ 2.42
CIRBP-208ENST00000586548 LRPPRCP42704 1394 aaKnown RBP30.15■■■□□ 2.42
CIRBP-208ENST00000586548 ZBED9Q6R2W3 1325 aa30.15■■■□□ 2.42
CIRBP-208ENST00000586548 HDGFP51858 240 aaKnown RBP30.14■■■□□ 2.42
CIRBP-208ENST00000586548 STK26Q9P289 416 aa30.13■■■□□ 2.41
CIRBP-208ENST00000586548 DLC1Q96QB1 1528 aa30.13■■■□□ 2.41
CIRBP-208ENST00000586548 SENP3Q9H4L4 574 aaPredicted RBP30.1■■■□□ 2.41
CIRBP-208ENST00000586548 TMEM2Q9UHN6 1383 aa30.1■■■□□ 2.41
CIRBP-208ENST00000586548 PRAM1Q96QH2 718 aa30.05■■■□□ 2.4
CIRBP-208ENST00000586548 CARD14Q9BXL6 1004 aa30.05■■■□□ 2.4
CIRBP-208ENST00000586548 CEBPAP49715 358 aaPredicted RBP30.05■■■□□ 2.4
CIRBP-208ENST00000586548 USP32Q8NFA0 1604 aa30.04■■■□□ 2.4
CIRBP-208ENST00000586548 POGKQ9P215 609 aa30.04■■■□□ 2.4
CIRBP-208ENST00000586548 ABCC11Q96J66 1382 aa30.03■■■□□ 2.4
CIRBP-208ENST00000586548 SAFB2Q14151 953 aaKnown RBP eCLIP30.02■■■□□ 2.4
CIRBP-208ENST00000586548 NINLQ9Y2I6 1382 aa30.02■■■□□ 2.4
CIRBP-208ENST00000586548 KNDC1Q76NI1 1749 aa30.01■■■□□ 2.4
CIRBP-208ENST00000586548 INSRP06213 1382 aa30.01■■■□□ 2.4
CIRBP-208ENST00000586548 PPP2R1AP30153 589 aa30.01■■■□□ 2.39
CIRBP-208ENST00000586548 SLC12A5Q9H2X9 1139 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms