RNA–Protein interactions for RNA: ENST00000586001.1

ATP6V0A1-208, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-208	ENST00000586001	NECTIN2	Q92692	538 aa		14.18	□□□□□ -0.14
ATP6V0A1-208	ENST00000586001	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	14.16	□□□□□ -0.14
ATP6V0A1-208	ENST00000586001	SLC4A3	P48751	1232 aa		14.15	□□□□□ -0.14
ATP6V0A1-208	ENST00000586001	METTL3	Q86U44	580 aa	Known RBP	14.15	□□□□□ -0.14
ATP6V0A1-208	ENST00000586001	RNF40	O75150	1001 aa		14.14	□□□□□ -0.15
ATP6V0A1-208	ENST00000586001	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
ATP6V0A1-208	ENST00000586001	APLP1	P51693	650 aa		14.1	□□□□□ -0.15
ATP6V0A1-208	ENST00000586001	KCNC4	Q03721	635 aa		14.08	□□□□□ -0.16
ATP6V0A1-208	ENST00000586001	MYO15B	Q96JP2	1530 aa		14.08	□□□□□ -0.16
ATP6V0A1-208	ENST00000586001	TJAP1	Q5JTD0	557 aa		14.07	□□□□□ -0.16
ATP6V0A1-208	ENST00000586001		A0A0G2JS52	829 aa		14.05	□□□□□ -0.16
ATP6V0A1-208	ENST00000586001	MAP2K5	Q13163	448 aa		14.05	□□□□□ -0.16
ATP6V0A1-208	ENST00000586001	PRR14	Q9BWN1	585 aa		14.05	□□□□□ -0.16
ATP6V0A1-208	ENST00000586001	LMOD2	Q6P5Q4	547 aa		14.04	□□□□□ -0.16
ATP6V0A1-208	ENST00000586001	PHOX2B	Q99453	314 aa		14.03	□□□□□ -0.16
ATP6V0A1-208	ENST00000586001	MTR	Q99707	1265 aa		14.03	□□□□□ -0.16
ATP6V0A1-208	ENST00000586001	MINK1	Q8N4C8	1332 aa	Predicted RBP	14.01	□□□□□ -0.17
ATP6V0A1-208	ENST00000586001	IRF6	O14896	467 aa		14.01	□□□□□ -0.17
ATP6V0A1-208	ENST00000586001	SLC10A3	P09131	477 aa		14.01	□□□□□ -0.17
ATP6V0A1-208	ENST00000586001	IL21	Q9HBE4	155 aa		14.01	□□□□□ -0.17
ATP6V0A1-208	ENST00000586001	DAXX	Q9UER7	740 aa	Predicted RBP	14.01	□□□□□ -0.17
ATP6V0A1-208	ENST00000586001	RGS20	O76081	388 aa		13.98	□□□□□ -0.17
ATP6V0A1-208	ENST00000586001	RSPH4A	Q5TD94	716 aa		13.97	□□□□□ -0.17
ATP6V0A1-208	ENST00000586001	ACTN4	O43707	911 aa	Known RBP	13.96	□□□□□ -0.17
ATP6V0A1-208	ENST00000586001	CFH	P08603	1231 aa		13.96	□□□□□ -0.17
ATP6V0A1-208	ENST00000586001	KMT5B	Q4FZB7	885 aa		13.96	□□□□□ -0.17
ATP6V0A1-208	ENST00000586001	NLRP7	Q8WX94	980 aa		13.95	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	SLC24A1	O60721	1099 aa		13.94	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	ZNF516	Q92618	1163 aa		13.94	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	PCDHB3	Q9Y5E6	796 aa		13.94	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	ZMYND10	O75800	440 aa		13.91	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	COPS2	P61201	443 aa		13.91	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	SULF1	Q8IWU6	871 aa		13.91	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	ZC3H15	Q8WU90	426 aa	Known RBP	13.91	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	CCDC102A	Q96A19	550 aa		13.91	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	SHROOM4	Q9ULL8	1493 aa		13.91	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	BARGIN	Q6ZT62	677 aa		13.9	□□□□□ -0.18
ATP6V0A1-208	ENST00000586001	ZPR1	O75312	459 aa		13.89	□□□□□ -0.19
ATP6V0A1-208	ENST00000586001	BLOC1S3	Q6QNY0	202 aa		13.89	□□□□□ -0.19
ATP6V0A1-208	ENST00000586001	DDX11L8	A8MPP1	907 aa		13.88	□□□□□ -0.19
ATP6V0A1-208	ENST00000586001	RDH13	Q8NBN7	331 aa		13.87	□□□□□ -0.19
ATP6V0A1-208	ENST00000586001	GCGR	P47871	477 aa		13.84	□□□□□ -0.19
ATP6V0A1-208	ENST00000586001	NKX2-3	Q8TAU0	364 aa		13.84	□□□□□ -0.19
ATP6V0A1-208	ENST00000586001	MDM2	Q00987	491 aa	Predicted RBP	13.83	□□□□□ -0.2
ATP6V0A1-208	ENST00000586001	KRI1	Q8N9T8	703 aa	Known RBP	13.82	□□□□□ -0.2
ATP6V0A1-208	ENST00000586001	NR1I2	O75469	434 aa		13.81	□□□□□ -0.2
ATP6V0A1-208	ENST00000586001	PPP1R18	Q6NYC8	613 aa		13.81	□□□□□ -0.2
ATP6V0A1-208	ENST00000586001	TMUB1	Q9BVT8	246 aa		13.81	□□□□□ -0.2
ATP6V0A1-208	ENST00000586001	CD46	P15529	392 aa		13.79	□□□□□ -0.2
ATP6V0A1-208	ENST00000586001	CLCN1	P35523	988 aa		13.79	□□□□□ -0.2
ATP6V0A1-208	ENST00000586001	GPCPD1	Q9NPB8	672 aa		13.78	□□□□□ -0.2
ATP6V0A1-208	ENST00000586001	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.78	□□□□□ -0.2
ATP6V0A1-208	ENST00000586001	ATP6V1A	P38606	617 aa		13.77	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	FUT2	Q10981	343 aa		13.77	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	SCUBE3	Q8IX30	993 aa		13.77	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	PUS10	Q3MIT2	529 aa	Known RBP	13.76	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	MORN1	Q5T089	497 aa		13.76	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	DCAF1	Q9Y4B6	1507 aa		13.75	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	GGCX	P38435	758 aa		13.75	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	TLL1	O43897	1013 aa		13.74	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.74	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	AMHR2	Q16671	573 aa		13.73	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	BCAN	Q96GW7	911 aa		13.73	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	ADH1B	P00325	375 aa		13.72	□□□□□ -0.21
ATP6V0A1-208	ENST00000586001	GRIPAP1	Q4V328	841 aa		13.7	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	REPIN1	Q9BWE0	567 aa	Known RBP	13.7	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	THAP11	Q96EK4	314 aa		13.69	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	SLC27A5	Q9Y2P5	690 aa		13.69	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	SALL2	Q9Y467	1007 aa	Predicted RBP	13.69	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	BICRA	Q9NZM4	1560 aa		13.69	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	KDM4A	O75164	1064 aa		13.68	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	USP46	P62068	366 aa		13.67	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	AK7	Q96M32	723 aa		13.67	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	RNF223	E7ERA6	249 aa		13.66	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	SPSB2	Q99619	263 aa		13.66	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001		V9GY48	417 aa	Predicted RBP	13.66	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	TRIM66	O15016	1216 aa		13.65	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	S1PR4	O95977	384 aa		13.65	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	PRKD2	Q9BZL6	878 aa		13.65	□□□□□ -0.22
ATP6V0A1-208	ENST00000586001	TTLL12	Q14166	644 aa	Predicted RBP	13.64	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	SLC6A16	Q9GZN6	736 aa		13.64	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	FMNL1	O95466	1100 aa	Predicted RBP	13.63	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	SSTR3	P32745	418 aa	Predicted RBP	13.63	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	BRICD5	Q6PL45	260 aa		13.63	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	ANKLE1	Q8NAG6	615 aa		13.63	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.61	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	IRX2	Q9BZI1	471 aa	Predicted RBP	13.61	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	UNC13A	Q9UPW8	1703 aa		13.61	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	HOXA2	O43364	376 aa		13.6	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001		Q3C1V9	767 aa		13.6	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	FAM160A2	Q8N612	972 aa	Predicted RBP	13.59	□□□□□ -0.23
ATP6V0A1-208	ENST00000586001	PARP9	Q8IXQ6	854 aa		13.58	□□□□□ -0.24
ATP6V0A1-208	ENST00000586001	PPEF1	O14829	653 aa	Predicted RBP	13.57	□□□□□ -0.24
ATP6V0A1-208	ENST00000586001	NUTM1	Q86Y26	1132 aa		13.57	□□□□□ -0.24
ATP6V0A1-208	ENST00000586001	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.56	□□□□□ -0.24
ATP6V0A1-208	ENST00000586001	MSS51	Q4VC12	460 aa		13.56	□□□□□ -0.24
ATP6V0A1-208	ENST00000586001	RNF19B	Q6ZMZ0	732 aa		13.56	□□□□□ -0.24
ATP6V0A1-208	ENST00000586001	EMID1	Q96A84	441 aa	Predicted RBP	13.56	□□□□□ -0.24
ATP6V0A1-208	ENST00000586001	SLC24A3	Q9HC58	644 aa		13.56	□□□□□ -0.24
ATP6V0A1-208	ENST00000586001	CECR2	Q9BXF3	1484 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms