RNA–Protein interactions for RNA: ENST00000585839.5

PKN1-204, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 3,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-204ENST00000585839 AMER1Q5JTC6 1135 aaPredicted RBP24.19■■□□□ 1.46
PKN1-204ENST00000585839 ARHGEF12Q9NZN5 1544 aa24.18■■□□□ 1.46
PKN1-204ENST00000585839 WASHC2CQ9Y4E1 1318 aa24.18■■□□□ 1.46
PKN1-204ENST00000585839 SPRYD3Q8NCJ5 442 aa24.18■■□□□ 1.46
PKN1-204ENST00000585839 U2AF1L5P0DN76 240 aaPredicted RBP24.17■■□□□ 1.46
PKN1-204ENST00000585839 U2AF1Q01081 240 aaKnown RBP eCLIP24.17■■□□□ 1.46
PKN1-204ENST00000585839 SRPK2P78362 688 aaKnown RBP24.17■■□□□ 1.46
PKN1-204ENST00000585839 RNF123Q5XPI4 1314 aa24.17■■□□□ 1.46
PKN1-204ENST00000585839 TTC37Q6PGP7 1564 aa24.17■■□□□ 1.46
PKN1-204ENST00000585839 CABP2Q9NPB3 220 aa24.17■■□□□ 1.46
PKN1-204ENST00000585839 DUSP27Q5VZP5 1158 aa24.15■■□□□ 1.46
PKN1-204ENST00000585839 BACH2Q9BYV9 841 aa24.15■■□□□ 1.46
PKN1-204ENST00000585839 CARD14Q9BXL6 1004 aa24.15■■□□□ 1.46
PKN1-204ENST00000585839 TNNQ9UQP3 1299 aa24.14■■□□□ 1.45
PKN1-204ENST00000585839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.13■■□□□ 1.452e-7■□□□□ 10.2
PKN1-204ENST00000585839 SHANK2Q9UPX8 1470 aa24.13■■□□□ 1.45
PKN1-204ENST00000585839 FBLN1P23142 703 aa24.1■■□□□ 1.45
PKN1-204ENST00000585839 MTHFSP49914 203 aa24.1■■□□□ 1.45
PKN1-204ENST00000585839 MINK1Q8N4C8 1332 aaPredicted RBP24.09■■□□□ 1.45
PKN1-204ENST00000585839 GGNBP2Q9H3C7 697 aa24.09■■□□□ 1.45
PKN1-204ENST00000585839 MAGI2Q86UL8 1455 aa24.08■■□□□ 1.45
PKN1-204ENST00000585839 CFAP65Q6ZU64 1925 aaKnown RBP24.08■■□□□ 1.44
PKN1-204ENST00000585839 KDM5DQ9BY66 1539 aa24.07■■□□□ 1.44
PKN1-204ENST00000585839 CENPJQ9HC77 1338 aaPredicted RBP24.06■■□□□ 1.44
PKN1-204ENST00000585839 COL17A1Q9UMD9 1497 aaPredicted RBP24.06■■□□□ 1.44
PKN1-204ENST00000585839 POGKQ9P215 609 aa24.06■■□□□ 1.44
PKN1-204ENST00000585839 PLCH2O75038 1416 aa24.05■■□□□ 1.44
PKN1-204ENST00000585839 SLKQ9H2G2 1235 aaPredicted RBP24.05■■□□□ 1.44
PKN1-204ENST00000585839 UGGT1Q9NYU2 1555 aa24.05■■□□□ 1.44
PKN1-204ENST00000585839 SOX12O15370 315 aa24.05■■□□□ 1.44
PKN1-204ENST00000585839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.04■■□□□ 1.44
PKN1-204ENST00000585839 TCP11L2Q8N4U5 519 aa24.04■■□□□ 1.44
PKN1-204ENST00000585839 SLFN5Q08AF3 891 aa24.04■■□□□ 1.44
PKN1-204ENST00000585839 TSR2Q969E8 191 aaKnown RBP24.04■■□□□ 1.44
PKN1-204ENST00000585839 NUTM2FA1L443 756 aa24.02■■□□□ 1.44
PKN1-204ENST00000585839 CROCC2H7BZ55 1655 aa24.02■■□□□ 1.44
PKN1-204ENST00000585839 CDC42BPBQ9Y5S2 1711 aa24.02■■□□□ 1.44
PKN1-204ENST00000585839 PLEKHG5O94827 1062 aa24.01■■□□□ 1.43
PKN1-204ENST00000585839 EIF3AQ14152 1382 aaKnown RBP24.01■■□□□ 1.43
PKN1-204ENST00000585839 IGHDP01880 384 aa24■■□□□ 1.43
PKN1-204ENST00000585839 ELL2O00472 640 aaPredicted RBP24■■□□□ 1.43
PKN1-204ENST00000585839 CENPQQ7L2Z9 268 aaPredicted RBP23.98■■□□□ 1.43
PKN1-204ENST00000585839 FTSJ3Q8IY81 847 aaKnown RBP23.98■■□□□ 1.43
PKN1-204ENST00000585839 CFAP53Q96M91 514 aa23.98■■□□□ 1.43
PKN1-204ENST00000585839 ADCY10Q96PN6 1610 aa23.97■■□□□ 1.43
PKN1-204ENST00000585839 CYB5RLQ6IPT4 315 aa23.97■■□□□ 1.43
PKN1-204ENST00000585839 WWC1Q8IX03 1113 aa23.96■■□□□ 1.43
PKN1-204ENST00000585839 NOS1P29475 1434 aa23.96■■□□□ 1.43
PKN1-204ENST00000585839 E9PSI1 815 aa23.96■■□□□ 1.43
PKN1-204ENST00000585839 FANCAO15360 1455 aa23.95■■□□□ 1.42
PKN1-204ENST00000585839 IL27Q8NEV9 243 aa23.95■■□□□ 1.42
PKN1-204ENST00000585839 GPRASP1Q5JY77 1395 aa23.95■■□□□ 1.42
PKN1-204ENST00000585839 NSD3Q9BZ95 1437 aa23.94■■□□□ 1.42
PKN1-204ENST00000585839 CHD1O14646 1710 aa23.94■■□□□ 1.42
PKN1-204ENST00000585839 DUOX2Q9NRD8 1548 aa23.93■■□□□ 1.42
PKN1-204ENST00000585839 ADGRL1O94910 1474 aa23.93■■□□□ 1.42
PKN1-204ENST00000585839 FAM161AQ3B820 660 aa23.93■■□□□ 1.42
PKN1-204ENST00000585839 SCAF11Q99590 1463 aaKnown RBP23.92■■□□□ 1.42
PKN1-204ENST00000585839 ABCC2Q92887 1545 aa23.92■■□□□ 1.42
PKN1-204ENST00000585839 ARHGEF5Q12774 1597 aa23.92■■□□□ 1.42
PKN1-204ENST00000585839 MS4A1P11836 297 aa23.9■■□□□ 1.42
PKN1-204ENST00000585839 PREX2Q70Z35 1606 aa23.9■■□□□ 1.42
PKN1-204ENST00000585839 DDRGK1Q96HY6 314 aa23.9■■□□□ 1.42
PKN1-204ENST00000585839 FBXO31Q5XUX0 539 aaPredicted RBP23.89■■□□□ 1.42
PKN1-204ENST00000585839 SMC4Q9NTJ3 1288 aa23.89■■□□□ 1.42
PKN1-204ENST00000585839 ITPRIPQ8IWB1 547 aa23.89■■□□□ 1.41
PKN1-204ENST00000585839 WDR7Q9Y4E6 1490 aa23.88■■□□□ 1.41
PKN1-204ENST00000585839 MAPK8IP3Q9UPT6 1336 aa23.88■■□□□ 1.41
PKN1-204ENST00000585839 SLC24A1O60721 1099 aa23.88■■□□□ 1.41
PKN1-204ENST00000585839 RLBP1P12271 317 aa23.88■■□□□ 1.41
PKN1-204ENST00000585839 TRPM1Q7Z4N2 1603 aa23.87■■□□□ 1.41
PKN1-204ENST00000585839 HMOX1P09601 288 aa23.87■■□□□ 1.41
PKN1-204ENST00000585839 ATP10AO60312 1499 aa23.87■■□□□ 1.41
PKN1-204ENST00000585839 SEC24BO95487 1268 aa23.87■■□□□ 1.41
PKN1-204ENST00000585839 RUNDC1Q96C34 613 aa23.85■■□□□ 1.41
PKN1-204ENST00000585839 THUMPD2Q9BTF0 503 aaKnown RBP23.85■■□□□ 1.41
PKN1-204ENST00000585839 NFKBIBQ15653 356 aa23.84■■□□□ 1.41
PKN1-204ENST00000585839 PRAM1Q96QH2 718 aa23.84■■□□□ 1.41
PKN1-204ENST00000585839 CGNL1Q0VF96 1302 aa23.84■■□□□ 1.41
PKN1-204ENST00000585839 FRAT2O75474 233 aaPredicted RBP23.84■■□□□ 1.41
PKN1-204ENST00000585839 IDI1Q13907 227 aa23.84■■□□□ 1.41
PKN1-204ENST00000585839 BLMP54132 1417 aaPredicted RBP23.82■■□□□ 1.4
PKN1-204ENST00000585839 EXOSC9Q06265 439 aaKnown RBP23.81■■□□□ 1.4
PKN1-204ENST00000585839 OSCARQ8IYS5 282 aa23.81■■□□□ 1.4
PKN1-204ENST00000585839 MAST1Q9Y2H9 1570 aa23.81■■□□□ 1.4
PKN1-204ENST00000585839 MFAP1P55081 439 aaKnown RBP23.81■■□□□ 1.4
PKN1-204ENST00000585839 C8orf34Q49A92 452 aa23.8■■□□□ 1.4
PKN1-204ENST00000585839 WAPLQ7Z5K2 1190 aa23.8■■□□□ 1.4
PKN1-204ENST00000585839 PCDHB15Q9Y5E8 787 aa23.8■■□□□ 1.4
PKN1-204ENST00000585839 EVC2Q86UK5 1308 aa23.79■■□□□ 1.4
PKN1-204ENST00000585839 ASXL2Q76L83 1435 aa23.79■■□□□ 1.4
PKN1-204ENST00000585839 APBB1O00213 710 aa23.79■■□□□ 1.4
PKN1-204ENST00000585839 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
PKN1-204ENST00000585839 ASXL1Q8IXJ9 1541 aa23.78■■□□□ 1.4
PKN1-204ENST00000585839 BRPF3Q9ULD4 1205 aa23.78■■□□□ 1.4
PKN1-204ENST00000585839 PRDM15P57071 1507 aaPredicted RBP23.78■■□□□ 1.4
PKN1-204ENST00000585839 MYO5CQ9NQX4 1742 aa23.77■■□□□ 1.4
PKN1-204ENST00000585839 VGFO15240 615 aaPredicted RBP23.77■■□□□ 1.4
PKN1-204ENST00000585839 RARSP54136 660 aaKnown RBP23.77■■□□□ 1.4
PKN1-204ENST00000585839 RIPK4P57078 832 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms