RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 IQGAP1P46940 1657 aa15.51■□□□□ 0.07
LIG3-204ENST00000585740 CAMSAP1Q5T5Y3 1602 aa15.5■□□□□ 0.07
LIG3-204ENST00000585740 SIGLEC1Q9BZZ2 1709 aa15.48■□□□□ 0.07
LIG3-204ENST00000585740 KTN1Q86UP2 1357 aaKnown RBP15.48■□□□□ 0.07
LIG3-204ENST00000585740 NBPF1Q3BBV0 1214 aa15.47■□□□□ 0.07
LIG3-204ENST00000585740 ADGRB3O60242 1522 aa15.47■□□□□ 0.07
LIG3-204ENST00000585740 REREQ9P2R6 1566 aa15.46■□□□□ 0.07
LIG3-204ENST00000585740 NPATQ14207 1427 aa15.46■□□□□ 0.07
LIG3-204ENST00000585740 ARHGAP31Q2M1Z3 1444 aa15.46■□□□□ 0.07
LIG3-204ENST00000585740 WASHC2CQ9Y4E1 1318 aa15.45■□□□□ 0.06
LIG3-204ENST00000585740 MROH2AA6NES4 1674 aa15.45■□□□□ 0.06
LIG3-204ENST00000585740 CEBPAP49715 358 aaPredicted RBP15.45■□□□□ 0.06
LIG3-204ENST00000585740 GGT6Q6P531 493 aa15.45■□□□□ 0.06
LIG3-204ENST00000585740 POLR3GLQ9BT43 218 aa15.45■□□□□ 0.06
LIG3-204ENST00000585740 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
LIG3-204ENST00000585740 SCAF11Q99590 1463 aaKnown RBP15.45■□□□□ 0.06
LIG3-204ENST00000585740 FER1L4A9Z1Z3 1794 aa15.44■□□□□ 0.06
LIG3-204ENST00000585740 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
LIG3-204ENST00000585740 EIF3AQ14152 1382 aaKnown RBP15.44■□□□□ 0.06
LIG3-204ENST00000585740 CFAP65Q6ZU64 1925 aaKnown RBP15.44■□□□□ 0.06
LIG3-204ENST00000585740 SPATA31D1Q6ZQQ2 1576 aa15.44■□□□□ 0.06
LIG3-204ENST00000585740 TMF1P82094 1093 aa15.43■□□□□ 0.06
LIG3-204ENST00000585740 UGGT1Q9NYU2 1555 aa15.43■□□□□ 0.06
LIG3-204ENST00000585740 PPLO60437 1756 aa15.43■□□□□ 0.06
LIG3-204ENST00000585740 NOS1P29475 1434 aa15.43■□□□□ 0.06
LIG3-204ENST00000585740 RPGRIP1LQ68CZ1 1315 aa15.43■□□□□ 0.06
LIG3-204ENST00000585740 NRXN1Q9ULB1 1477 aa15.42■□□□□ 0.06
LIG3-204ENST00000585740 PIK3C2BO00750 1634 aa15.42■□□□□ 0.06
LIG3-204ENST00000585740 AGLP35573 1532 aa15.41■□□□□ 0.06
LIG3-204ENST00000585740 PREX1Q8TCU6 1659 aa15.41■□□□□ 0.06
LIG3-204ENST00000585740 CDCA8Q53HL2 280 aa15.4■□□□□ 0.06
LIG3-204ENST00000585740 TESK2Q96S53 571 aa15.4■□□□□ 0.06
LIG3-204ENST00000585740 MRS2Q9HD23 443 aa15.4■□□□□ 0.06
LIG3-204ENST00000585740 SETBP1Q9Y6X0 1596 aa15.4■□□□□ 0.06
LIG3-204ENST00000585740 RALBP1Q15311 655 aa15.39■□□□□ 0.05
LIG3-204ENST00000585740 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
LIG3-204ENST00000585740 STRCQ7RTU9 1775 aa15.38■□□□□ 0.05
LIG3-204ENST00000585740 SYNMO15061 1565 aa15.36■□□□□ 0.05
LIG3-204ENST00000585740 MYO3AQ8NEV4 1616 aa15.35■□□□□ 0.05
LIG3-204ENST00000585740 SLC52A1Q9NWF4 448 aa15.35■□□□□ 0.05
LIG3-204ENST00000585740 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
LIG3-204ENST00000585740 KDM5AP29375 1690 aaKnown RBP15.34■□□□□ 0.05
LIG3-204ENST00000585740 CHGAP10645 457 aaKnown RBP15.33■□□□□ 0.04
LIG3-204ENST00000585740 ADGRF5Q8IZF2 1346 aa15.33■□□□□ 0.04
LIG3-204ENST00000585740 BRD4O60885 1362 aaPredicted RBP15.33■□□□□ 0.04
LIG3-204ENST00000585740 MYBBP1AQ9BQG0 1328 aaKnown RBP15.32■□□□□ 0.04
LIG3-204ENST00000585740 PIK3C2GO75747 1445 aa15.32■□□□□ 0.04
LIG3-204ENST00000585740 CCDC184Q52MB2 194 aa15.31■□□□□ 0.04
LIG3-204ENST00000585740 SBNO2Q9Y2G9 1366 aa15.31■□□□□ 0.04
LIG3-204ENST00000585740 ZFYVE9O95405 1425 aa15.3■□□□□ 0.04
LIG3-204ENST00000585740 NEXMIFQ5QGS0 1516 aa15.3■□□□□ 0.04
LIG3-204ENST00000585740 CFAP70Q5T0N1 1121 aa15.3■□□□□ 0.04
LIG3-204ENST00000585740 LTBP4Q8N2S1 1624 aa15.29■□□□□ 0.04
LIG3-204ENST00000585740 PARD3Q8TEW0 1356 aa15.29■□□□□ 0.04
LIG3-204ENST00000585740 VGFO15240 615 aaPredicted RBP15.29■□□□□ 0.04
LIG3-204ENST00000585740 FAM9BQ8IZU0 186 aa15.29■□□□□ 0.04
LIG3-204ENST00000585740 C14orf93Q9H972 538 aaKnown RBP15.29■□□□□ 0.04
LIG3-204ENST00000585740 ZBED9Q6R2W3 1325 aa15.28■□□□□ 0.04
LIG3-204ENST00000585740 PER1O15534 1290 aaPredicted RBP15.28■□□□□ 0.04
LIG3-204ENST00000585740 TMC1Q8TDI8 760 aa15.27■□□□□ 0.04
LIG3-204ENST00000585740 PANK3Q9H999 370 aa15.27■□□□□ 0.04
LIG3-204ENST00000585740 CLTCQ00610 1675 aaKnown RBP15.27■□□□□ 0.03
LIG3-204ENST00000585740 TMEM131LA2VDJ0 1609 aa15.27■□□□□ 0.03
LIG3-204ENST00000585740 ERVK-7P63135 1459 aa15.27■□□□□ 0.03
LIG3-204ENST00000585740 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.03
LIG3-204ENST00000585740 SETD1BQ9UPS6 1966 aaKnown RBP15.26■□□□□ 0.03
LIG3-204ENST00000585740 NEFLP07196 543 aa15.26■□□□□ 0.03
LIG3-204ENST00000585740 NLRP13Q86W25 1043 aa15.26■□□□□ 0.03
LIG3-204ENST00000585740 ADGRB1O14514 1584 aa15.26■□□□□ 0.03
LIG3-204ENST00000585740 IQSEC2Q5JU85 1478 aa15.26■□□□□ 0.03
LIG3-204ENST00000585740 MYOM1P52179 1685 aa15.25■□□□□ 0.03
LIG3-204ENST00000585740 ESF1Q9H501 851 aaKnown RBP15.25■□□□□ 0.03
LIG3-204ENST00000585740 IDI1Q13907 227 aa15.24■□□□□ 0.03
LIG3-204ENST00000585740 SUPT16HQ9Y5B9 1047 aaKnown RBP15.24■□□□□ 0.03
LIG3-204ENST00000585740 QRICH2Q9H0J4 1663 aa15.24■□□□□ 0.03
LIG3-204ENST00000585740 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
LIG3-204ENST00000585740 PNISRQ8TF01 805 aaKnown RBP15.23■□□□□ 0.03
LIG3-204ENST00000585740 INSRP06213 1382 aa15.23■□□□□ 0.03
LIG3-204ENST00000585740 NPC1L1Q9UHC9 1359 aa15.23■□□□□ 0.03
LIG3-204ENST00000585740 UBAP1LF5GYI3 381 aa15.22■□□□□ 0.03
LIG3-204ENST00000585740 LRPPRCP42704 1394 aaKnown RBP15.22■□□□□ 0.03
LIG3-204ENST00000585740 C3P01024 1663 aa15.22■□□□□ 0.03
LIG3-204ENST00000585740 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.03
LIG3-204ENST00000585740 KNSTRNQ9Y448 316 aa15.21■□□□□ 0.03
LIG3-204ENST00000585740 ASXL1Q8IXJ9 1541 aa15.21■□□□□ 0.03
LIG3-204ENST00000585740 ARHGEF28Q8N1W1 1705 aaKnown RBP15.2■□□□□ 0.02
LIG3-204ENST00000585740 CNGB1Q14028 1251 aaPredicted RBP15.2■□□□□ 0.02
LIG3-204ENST00000585740 PUS7Q96PZ0 661 aaKnown RBP15.2■□□□□ 0.02
LIG3-204ENST00000585740 ZNF335Q9H4Z2 1342 aaPredicted RBP15.18■□□□□ 0.02
LIG3-204ENST00000585740 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
LIG3-204ENST00000585740 CC2D1BQ5T0F9 858 aaKnown RBP15.15■□□□□ 0.02
LIG3-204ENST00000585740 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
LIG3-204ENST00000585740 TRAK1Q9UPV9 953 aa15.15■□□□□ 0.02
LIG3-204ENST00000585740 FKBP8Q14318 412 aa15.14■□□□□ 0.01
LIG3-204ENST00000585740 AMER1Q5JTC6 1135 aaPredicted RBP15.14■□□□□ 0.01
LIG3-204ENST00000585740 ERICH6BQ5W0A0 696 aa15.14■□□□□ 0.01
LIG3-204ENST00000585740 SMG6Q86US8 1419 aaKnown RBP15.14■□□□□ 0.01
LIG3-204ENST00000585740 FBXO31Q5XUX0 539 aaPredicted RBP15.13■□□□□ 0.01
LIG3-204ENST00000585740 EVC2Q86UK5 1308 aa15.13■□□□□ 0.01
LIG3-204ENST00000585740 USP32Q8NFA0 1604 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms