RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
CDK5RAP3-236ENST00000584991 C3P01024 1663 aa20.85■□□□□ 0.93
CDK5RAP3-236ENST00000584991 CEBPAP49715 358 aaPredicted RBP20.84■□□□□ 0.93
CDK5RAP3-236ENST00000584991 SUPT16HQ9Y5B9 1047 aaKnown RBP20.84■□□□□ 0.93
CDK5RAP3-236ENST00000584991 MYOM2P54296 1465 aa20.84■□□□□ 0.93
CDK5RAP3-236ENST00000584991 RPGRIP1LQ68CZ1 1315 aa20.83■□□□□ 0.93
CDK5RAP3-236ENST00000584991 ROCK2O75116 1388 aaKnown RBP20.83■□□□□ 0.93
CDK5RAP3-236ENST00000584991 CARD11Q9BXL7 1154 aa20.83■□□□□ 0.92
CDK5RAP3-236ENST00000584991 NBPF1Q3BBV0 1214 aa20.82■□□□□ 0.92
CDK5RAP3-236ENST00000584991 ADGRF5Q8IZF2 1346 aa20.82■□□□□ 0.92
CDK5RAP3-236ENST00000584991 TNRQ92752 1358 aa20.82■□□□□ 0.92
CDK5RAP3-236ENST00000584991 ANP32CO43423 234 aa20.81■□□□□ 0.92
CDK5RAP3-236ENST00000584991 STAG3Q9UJ98 1225 aa20.81■□□□□ 0.92
CDK5RAP3-236ENST00000584991 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
CDK5RAP3-236ENST00000584991 NEXMIFQ5QGS0 1516 aa20.8■□□□□ 0.92
CDK5RAP3-236ENST00000584991 RIMS1Q86UR5 1692 aaKnown RBP20.79■□□□□ 0.92
CDK5RAP3-236ENST00000584991 USP47Q96K76 1375 aa20.79■□□□□ 0.92
CDK5RAP3-236ENST00000584991 ADAMTSL3P82987 1691 aa20.79■□□□□ 0.92
CDK5RAP3-236ENST00000584991 NRXN1Q9ULB1 1477 aa20.78■□□□□ 0.92
CDK5RAP3-236ENST00000584991 GPRASP1Q5JY77 1395 aa20.78■□□□□ 0.92
CDK5RAP3-236ENST00000584991 NUTM2DQ5VT03 806 aaPredicted RBP20.77■□□□□ 0.92
CDK5RAP3-236ENST00000584991 KIAA1210Q9ULL0 1709 aa20.76■□□□□ 0.91
CDK5RAP3-236ENST00000584991 A2ML1A8K2U0 1454 aa20.76■□□□□ 0.91
CDK5RAP3-236ENST00000584991 LAMC1P11047 1609 aa20.75■□□□□ 0.91
CDK5RAP3-236ENST00000584991 VGFO15240 615 aaPredicted RBP20.75■□□□□ 0.91
CDK5RAP3-236ENST00000584991 CFAP70Q5T0N1 1121 aa20.73■□□□□ 0.91
CDK5RAP3-236ENST00000584991 PIK3C2GO75747 1445 aa20.72■□□□□ 0.91
CDK5RAP3-236ENST00000584991 UBR1Q8IWV7 1749 aa20.71■□□□□ 0.91
CDK5RAP3-236ENST00000584991 ZFYVE9O95405 1425 aa20.7■□□□□ 0.91
CDK5RAP3-236ENST00000584991 NLRP1Q9C000 1473 aa20.7■□□□□ 0.9
CDK5RAP3-236ENST00000584991 KDM5AP29375 1690 aaKnown RBP20.7■□□□□ 0.9
CDK5RAP3-236ENST00000584991 ST20-MTHFSA0A0A6YYL1 179 aa20.69■□□□□ 0.9
CDK5RAP3-236ENST00000584991 POLR1AO95602 1720 aaPredicted RBP20.68■□□□□ 0.9
CDK5RAP3-236ENST00000584991 RIMS2Q9UQ26 1411 aa20.68■□□□□ 0.9
CDK5RAP3-236ENST00000584991 C14orf93Q9H972 538 aaKnown RBP20.68■□□□□ 0.9
CDK5RAP3-236ENST00000584991 IQGAP1P46940 1657 aa20.67■□□□□ 0.9
CDK5RAP3-236ENST00000584991 C11orf95C9JLR9 678 aaPredicted RBP20.67■□□□□ 0.9
CDK5RAP3-236ENST00000584991 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
CDK5RAP3-236ENST00000584991 WASHC2AQ641Q2 1341 aa20.65■□□□□ 0.9
CDK5RAP3-236ENST00000584991 MYO3AQ8NEV4 1616 aa20.65■□□□□ 0.9
CDK5RAP3-236ENST00000584991 SCAF11Q99590 1463 aaKnown RBP20.64■□□□□ 0.9
CDK5RAP3-236ENST00000584991 SETBP1Q9Y6X0 1596 aa20.64■□□□□ 0.9
CDK5RAP3-236ENST00000584991 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
CDK5RAP3-236ENST00000584991 CCDC7Q96M83 1385 aa20.61■□□□□ 0.89
CDK5RAP3-236ENST00000584991 TMEM2Q9UHN6 1383 aa20.61■□□□□ 0.89
CDK5RAP3-236ENST00000584991 TMEM132EQ6IEE7 984 aa20.61■□□□□ 0.89
CDK5RAP3-236ENST00000584991 ADGRB1O14514 1584 aa20.6■□□□□ 0.89
CDK5RAP3-236ENST00000584991 KIF7Q2M1P5 1343 aa20.6■□□□□ 0.89
CDK5RAP3-236ENST00000584991 HDGFP51858 240 aaKnown RBP20.6■□□□□ 0.89
CDK5RAP3-236ENST00000584991 PTPRMP28827 1452 aa20.58■□□□□ 0.89
CDK5RAP3-236ENST00000584991 SETD1BQ9UPS6 1966 aaKnown RBP20.58■□□□□ 0.89
CDK5RAP3-236ENST00000584991 ALKQ9UM73 1620 aa20.57■□□□□ 0.88
CDK5RAP3-236ENST00000584991 CEP170BQ9Y4F5 1589 aaPredicted RBP20.57■□□□□ 0.88
CDK5RAP3-236ENST00000584991 EIF3AQ14152 1382 aaKnown RBP20.57■□□□□ 0.88
CDK5RAP3-236ENST00000584991 TESK2Q96S53 571 aa20.56■□□□□ 0.88
CDK5RAP3-236ENST00000584991 THEMISQ8N1K5 641 aaPredicted RBP20.56■□□□□ 0.88
CDK5RAP3-236ENST00000584991 TRAK1Q9UPV9 953 aa20.55■□□□□ 0.88
CDK5RAP3-236ENST00000584991 ASXL1Q8IXJ9 1541 aa20.55■□□□□ 0.88
CDK5RAP3-236ENST00000584991 NEFLP07196 543 aa20.54■□□□□ 0.88
CDK5RAP3-236ENST00000584991 POLR3GLQ9BT43 218 aa20.54■□□□□ 0.88
CDK5RAP3-236ENST00000584991 SLIT1O75093 1534 aa20.54■□□□□ 0.88
CDK5RAP3-236ENST00000584991 LTKP29376 864 aa20.54■□□□□ 0.88
CDK5RAP3-236ENST00000584991 NRXN3Q9Y4C0 1643 aa20.54■□□□□ 0.88
CDK5RAP3-236ENST00000584991 ARHGAP23Q9P227 1491 aa20.53■□□□□ 0.88
CDK5RAP3-236ENST00000584991 TXNDC2Q86VQ3 553 aa20.53■□□□□ 0.88
CDK5RAP3-236ENST00000584991 ZNF142P52746 1687 aaPredicted RBP20.52■□□□□ 0.88
CDK5RAP3-236ENST00000584991 SETD1AO15047 1707 aaKnown RBP20.52■□□□□ 0.88
CDK5RAP3-236ENST00000584991 EID1Q9Y6B2 187 aa20.52■□□□□ 0.87
CDK5RAP3-236ENST00000584991 BCANQ96GW7 911 aa20.51■□□□□ 0.87
CDK5RAP3-236ENST00000584991 DISP3Q9P2K9 1392 aa20.5■□□□□ 0.87
CDK5RAP3-236ENST00000584991 TMF1P82094 1093 aa20.5■□□□□ 0.87
CDK5RAP3-236ENST00000584991 STK26Q9P289 416 aa20.5■□□□□ 0.87
CDK5RAP3-236ENST00000584991 ARHGEF28Q8N1W1 1705 aaKnown RBP20.49■□□□□ 0.87
CDK5RAP3-236ENST00000584991 CENPJQ9HC77 1338 aaPredicted RBP20.48■□□□□ 0.87
CDK5RAP3-236ENST00000584991 PLEKHG1Q9ULL1 1385 aa20.48■□□□□ 0.87
CDK5RAP3-236ENST00000584991 YTHDC2Q9H6S0 1430 aaKnown RBP20.48■□□□□ 0.87
CDK5RAP3-236ENST00000584991 FKBP8Q14318 412 aa20.46■□□□□ 0.87
CDK5RAP3-236ENST00000584991 QRICH2Q9H0J4 1663 aa20.46■□□□□ 0.87
CDK5RAP3-236ENST00000584991 ADAMTS13Q76LX8 1427 aa20.44■□□□□ 0.86
CDK5RAP3-236ENST00000584991 KDM4FA0A1W2PPD8 638 aa20.44■□□□□ 0.86
CDK5RAP3-236ENST00000584991 METP08581 1390 aa20.44■□□□□ 0.86
CDK5RAP3-236ENST00000584991 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
CDK5RAP3-236ENST00000584991 SLC24A1O60721 1099 aa20.42■□□□□ 0.86
CDK5RAP3-236ENST00000584991 LRPPRCP42704 1394 aaKnown RBP20.42■□□□□ 0.86
CDK5RAP3-236ENST00000584991 SBNO2Q9Y2G9 1366 aa20.42■□□□□ 0.86
CDK5RAP3-236ENST00000584991 ERICH6BQ5W0A0 696 aa20.41■□□□□ 0.86
CDK5RAP3-236ENST00000584991 SLC26A8Q96RN1 970 aa20.4■□□□□ 0.86
CDK5RAP3-236ENST00000584991 MED14O60244 1454 aa20.4■□□□□ 0.86
CDK5RAP3-236ENST00000584991 SAFB2Q14151 953 aaKnown RBP eCLIP20.39■□□□□ 0.86
CDK5RAP3-236ENST00000584991 CDCA8Q53HL2 280 aa20.39■□□□□ 0.86
CDK5RAP3-236ENST00000584991 ANKLE2Q86XL3 938 aa20.39■□□□□ 0.86
CDK5RAP3-236ENST00000584991 PRAM1Q96QH2 718 aa20.39■□□□□ 0.85
CDK5RAP3-236ENST00000584991 POGKQ9P215 609 aa20.38■□□□□ 0.85
CDK5RAP3-236ENST00000584991 ABCC11Q96J66 1382 aa20.38■□□□□ 0.85
CDK5RAP3-236ENST00000584991 DLC1Q96QB1 1528 aa20.38■□□□□ 0.85
CDK5RAP3-236ENST00000584991 KNDC1Q76NI1 1749 aa20.36■□□□□ 0.85
CDK5RAP3-236ENST00000584991 TBX22Q9Y458 520 aa20.36■□□□□ 0.85
CDK5RAP3-236ENST00000584991 PRKRIP1Q9H875 184 aaPredicted RBP20.35■□□□□ 0.85
CDK5RAP3-236ENST00000584991 DIP2AQ14689 1571 aa20.35■□□□□ 0.85
CDK5RAP3-236ENST00000584991 HNRNPUQ00839 825 aaKnown RBP eCLIP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms