RNA–Protein interactions for RNA: ENST00000584179.1

LINC00473-204, long intergenic non-protein coding RNA 473, humanhuman

TSL 5 BASIC

Gene LINC00473, Length 1,717 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-204ENST00000584179 NEXMIFQ5QGS0 1516 aa17.38■□□□□ 0.37
LINC00473-204ENST00000584179 TNRQ92752 1358 aa17.38■□□□□ 0.37
LINC00473-204ENST00000584179 CHGAP10645 457 aaKnown RBP17.38■□□□□ 0.37
LINC00473-204ENST00000584179 ROCK2O75116 1388 aaKnown RBP17.37■□□□□ 0.37
LINC00473-204ENST00000584179 NLRP1Q9C000 1473 aa17.37■□□□□ 0.37
LINC00473-204ENST00000584179 VGFO15240 615 aaPredicted RBP17.35■□□□□ 0.37
LINC00473-204ENST00000584179 CARD11Q9BXL7 1154 aa17.35■□□□□ 0.37
LINC00473-204ENST00000584179 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
LINC00473-204ENST00000584179 USP47Q96K76 1375 aa17.35■□□□□ 0.37
LINC00473-204ENST00000584179 A2ML1A8K2U0 1454 aa17.34■□□□□ 0.37
LINC00473-204ENST00000584179 PIK3C2GO75747 1445 aa17.34■□□□□ 0.37
LINC00473-204ENST00000584179 RIMS1Q86UR5 1692 aaKnown RBP17.33■□□□□ 0.36
LINC00473-204ENST00000584179 SETD1BQ9UPS6 1966 aaKnown RBP17.33■□□□□ 0.36
LINC00473-204ENST00000584179 POLR1AO95602 1720 aaPredicted RBP17.32■□□□□ 0.36
LINC00473-204ENST00000584179 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
LINC00473-204ENST00000584179 ADGRF5Q8IZF2 1346 aa17.32■□□□□ 0.36
LINC00473-204ENST00000584179 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
LINC00473-204ENST00000584179 UBR1Q8IWV7 1749 aa17.31■□□□□ 0.36
LINC00473-204ENST00000584179 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
LINC00473-204ENST00000584179 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
LINC00473-204ENST00000584179 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
LINC00473-204ENST00000584179 HDGFP51858 240 aaKnown RBP17.27■□□□□ 0.36
LINC00473-204ENST00000584179 C14orf93Q9H972 538 aaKnown RBP17.27■□□□□ 0.36
LINC00473-204ENST00000584179 SCAF11Q99590 1463 aaKnown RBP17.27■□□□□ 0.36
LINC00473-204ENST00000584179 CEBPAP49715 358 aaPredicted RBP17.27■□□□□ 0.35
LINC00473-204ENST00000584179 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.27■□□□□ 0.35
LINC00473-204ENST00000584179 RIMS2Q9UQ26 1411 aa17.25■□□□□ 0.35
LINC00473-204ENST00000584179 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
LINC00473-204ENST00000584179 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
LINC00473-204ENST00000584179 EIF3AQ14152 1382 aaKnown RBP17.24■□□□□ 0.35
LINC00473-204ENST00000584179 CFAP70Q5T0N1 1121 aa17.24■□□□□ 0.35
LINC00473-204ENST00000584179 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
LINC00473-204ENST00000584179 TMEM2Q9UHN6 1383 aa17.23■□□□□ 0.35
LINC00473-204ENST00000584179 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
LINC00473-204ENST00000584179 SLC24A1O60721 1099 aa17.22■□□□□ 0.35
LINC00473-204ENST00000584179 SLIT1O75093 1534 aa17.22■□□□□ 0.35
LINC00473-204ENST00000584179 ZNF142P52746 1687 aaPredicted RBP17.22■□□□□ 0.35
LINC00473-204ENST00000584179 CEP170BQ9Y4F5 1589 aaPredicted RBP17.2■□□□□ 0.34
LINC00473-204ENST00000584179 ARHGAP23Q9P227 1491 aa17.2■□□□□ 0.34
LINC00473-204ENST00000584179 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
LINC00473-204ENST00000584179 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
LINC00473-204ENST00000584179 PTPRMP28827 1452 aa17.19■□□□□ 0.34
LINC00473-204ENST00000584179 THEMISQ8N1K5 641 aaPredicted RBP17.19■□□□□ 0.34
LINC00473-204ENST00000584179 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
LINC00473-204ENST00000584179 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
LINC00473-204ENST00000584179 SBNO2Q9Y2G9 1366 aa17.17■□□□□ 0.34
LINC00473-204ENST00000584179 SETD1AO15047 1707 aaKnown RBP17.17■□□□□ 0.34
LINC00473-204ENST00000584179 NUTM2DQ5VT03 806 aaPredicted RBP17.16■□□□□ 0.34
LINC00473-204ENST00000584179 TESK2Q96S53 571 aa17.16■□□□□ 0.34
LINC00473-204ENST00000584179 KIF7Q2M1P5 1343 aa17.16■□□□□ 0.34
LINC00473-204ENST00000584179 NRXN3Q9Y4C0 1643 aa17.15■□□□□ 0.34
LINC00473-204ENST00000584179 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
LINC00473-204ENST00000584179 EID1Q9Y6B2 187 aa17.15■□□□□ 0.34
LINC00473-204ENST00000584179 PLEKHG1Q9ULL1 1385 aa17.14■□□□□ 0.33
LINC00473-204ENST00000584179 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
LINC00473-204ENST00000584179 ASXL1Q8IXJ9 1541 aa17.14■□□□□ 0.33
LINC00473-204ENST00000584179 ARHGEF28Q8N1W1 1705 aaKnown RBP17.13■□□□□ 0.33
LINC00473-204ENST00000584179 TMF1P82094 1093 aa17.12■□□□□ 0.33
LINC00473-204ENST00000584179 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
LINC00473-204ENST00000584179 YTHDC2Q9H6S0 1430 aaKnown RBP17.1■□□□□ 0.33
LINC00473-204ENST00000584179 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
LINC00473-204ENST00000584179 TMEM132EQ6IEE7 984 aa17.1■□□□□ 0.33
LINC00473-204ENST00000584179 TXNDC2Q86VQ3 553 aa17.1■□□□□ 0.33
LINC00473-204ENST00000584179 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
LINC00473-204ENST00000584179 LTKP29376 864 aa17.09■□□□□ 0.33
LINC00473-204ENST00000584179 DIP2AQ14689 1571 aa17.09■□□□□ 0.33
LINC00473-204ENST00000584179 QRICH2Q9H0J4 1663 aa17.09■□□□□ 0.33
LINC00473-204ENST00000584179 MED14O60244 1454 aa17.08■□□□□ 0.32
LINC00473-204ENST00000584179 TRAK1Q9UPV9 953 aa17.07■□□□□ 0.32
LINC00473-204ENST00000584179 LRPPRCP42704 1394 aaKnown RBP17.07■□□□□ 0.32
LINC00473-204ENST00000584179 ABCC11Q96J66 1382 aa17.07■□□□□ 0.32
LINC00473-204ENST00000584179 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
LINC00473-204ENST00000584179 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
LINC00473-204ENST00000584179 DISP3Q9P2K9 1392 aa17.06■□□□□ 0.32
LINC00473-204ENST00000584179 TECPR2O15040 1411 aa17.06■□□□□ 0.32
LINC00473-204ENST00000584179 ANKLE2Q86XL3 938 aa17.04■□□□□ 0.32
LINC00473-204ENST00000584179 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
LINC00473-204ENST00000584179 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
LINC00473-204ENST00000584179 PUS7Q96PZ0 661 aaKnown RBP17.03■□□□□ 0.32
LINC00473-204ENST00000584179 METP08581 1390 aa17.02■□□□□ 0.31
LINC00473-204ENST00000584179 FAM135BQ49AJ0 1406 aa17.02■□□□□ 0.31
LINC00473-204ENST00000584179 BCANQ96GW7 911 aa17.01■□□□□ 0.31
LINC00473-204ENST00000584179 CPS1P31327 1500 aa17.01■□□□□ 0.31
LINC00473-204ENST00000584179 PIK3R4Q99570 1358 aa17.01■□□□□ 0.31
LINC00473-204ENST00000584179 MIER1Q8N108 512 aa17.01■□□□□ 0.31
LINC00473-204ENST00000584179 LMTK3Q96Q04 1460 aa17■□□□□ 0.31
LINC00473-204ENST00000584179 STK26Q9P289 416 aa16.99■□□□□ 0.31
LINC00473-204ENST00000584179 ANP32CO43423 234 aa16.99■□□□□ 0.31
LINC00473-204ENST00000584179 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
LINC00473-204ENST00000584179 EVC2Q86UK5 1308 aa16.98■□□□□ 0.31
LINC00473-204ENST00000584179 HSPA2P54652 639 aa16.97■□□□□ 0.31
LINC00473-204ENST00000584179 PRAM1Q96QH2 718 aa16.97■□□□□ 0.31
LINC00473-204ENST00000584179 POGKQ9P215 609 aa16.97■□□□□ 0.31
LINC00473-204ENST00000584179 MYOM1P52179 1685 aa16.96■□□□□ 0.31
LINC00473-204ENST00000584179 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.3
LINC00473-204ENST00000584179 TULP4Q9NRJ4 1543 aa16.95■□□□□ 0.3
LINC00473-204ENST00000584179 PTCH1Q13635 1447 aa16.94■□□□□ 0.3
LINC00473-204ENST00000584179 XRN1Q8IZH2 1706 aaKnown RBP16.94■□□□□ 0.3
LINC00473-204ENST00000584179 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
LINC00473-204ENST00000584179 NPHP4O75161 1426 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms