RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 CLCN1P35523 988 aa8.94□□□□□ -0.98
SKA2-210ENST00000584089 SLC4A3P48751 1232 aa8.94□□□□□ -0.98
SKA2-210ENST00000584089 MDM2Q00987 491 aaPredicted RBP8.94□□□□□ -0.98
SKA2-210ENST00000584089 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
SKA2-210ENST00000584089 TMUB1Q9BVT8 246 aa8.94□□□□□ -0.98
SKA2-210ENST00000584089 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
SKA2-210ENST00000584089 PDE4DQ08499 809 aa8.93□□□□□ -0.98
SKA2-210ENST00000584089 SLF2Q8IX21 1173 aa8.93□□□□□ -0.98
SKA2-210ENST00000584089 KCTD12Q96CX2 325 aaKnown RBP8.93□□□□□ -0.98
SKA2-210ENST00000584089 TTLL12Q14166 644 aaPredicted RBP8.92□□□□□ -0.98
SKA2-210ENST00000584089 THSD4Q6ZMP0 1018 aa8.92□□□□□ -0.98
SKA2-210ENST00000584089 RNF166Q96A37 237 aaPredicted RBP8.92□□□□□ -0.98
SKA2-210ENST00000584089 GPCPD1Q9NPB8 672 aa8.92□□□□□ -0.98
SKA2-210ENST00000584089 MMRN1Q13201 1228 aa8.91□□□□□ -0.98
SKA2-210ENST00000584089 SULF1Q8IWU6 871 aa8.91□□□□□ -0.98
SKA2-210ENST00000584089 BCAMP50895 628 aa8.9□□□□□ -0.98
SKA2-210ENST00000584089 PARP9Q8IXQ6 854 aa8.9□□□□□ -0.98
SKA2-210ENST00000584089 NECTIN2Q92692 538 aa8.9□□□□□ -0.98
SKA2-210ENST00000584089 RSPH4AQ5TD94 716 aa8.89□□□□□ -0.99
SKA2-210ENST00000584089 REPIN1Q9BWE0 567 aaKnown RBP8.89□□□□□ -0.99
SKA2-210ENST00000584089 GIGYF2Q6Y7W6 1299 aaKnown RBP8.88□□□□□ -0.99
SKA2-210ENST00000584089 FAM217BQ9NTX9 383 aaPredicted RBP8.88□□□□□ -0.99
SKA2-210ENST00000584089 TSR3Q9UJK0 312 aaKnown RBP8.88□□□□□ -0.99
SKA2-210ENST00000584089 HPS5Q9UPZ3 1129 aa8.88□□□□□ -0.99
SKA2-210ENST00000584089 DDX11L8A8MPP1 907 aa8.87□□□□□ -0.99
SKA2-210ENST00000584089 RNF40O75150 1001 aa8.87□□□□□ -0.99
SKA2-210ENST00000584089 PPP4CP60510 307 aa8.87□□□□□ -0.99
SKA2-210ENST00000584089 SLC10A3P09131 477 aa8.85□□□□□ -0.99
SKA2-210ENST00000584089 SSTR3P32745 418 aaPredicted RBP8.85□□□□□ -0.99
SKA2-210ENST00000584089 NYAP1Q6ZVC0 841 aa8.85□□□□□ -0.99
SKA2-210ENST00000584089 RDH13Q8NBN7 331 aa8.85□□□□□ -0.99
SKA2-210ENST00000584089 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
SKA2-210ENST00000584089 CD46P15529 392 aa8.84□□□□□ -0.99
SKA2-210ENST00000584089 PTPN5P54829 565 aa8.84□□□□□ -0.99
SKA2-210ENST00000584089 WBP1LQ9NX94 342 aa8.84□□□□□ -0.99
SKA2-210ENST00000584089 BRPF1P55201 1214 aaPredicted RBP8.83□□□□□ -1
SKA2-210ENST00000584089 NEUROD2Q15784 382 aa8.83□□□□□ -1
SKA2-210ENST00000584089 GPBP1L1Q9HC44 474 aaPredicted RBP8.83□□□□□ -1
SKA2-210ENST00000584089 PRR14Q9BWN1 585 aa8.82□□□□□ -1
SKA2-210ENST00000584089 KDM4CQ9H3R0 1056 aa8.82□□□□□ -1
SKA2-210ENST00000584089 MS4A1P11836 297 aa8.81□□□□□ -1
SKA2-210ENST00000584089 CFHP08603 1231 aa8.8□□□□□ -1
SKA2-210ENST00000584089 GCGRP47871 477 aa8.8□□□□□ -1
SKA2-210ENST00000584089 KMT5BQ4FZB7 885 aa8.8□□□□□ -1
SKA2-210ENST00000584089 ACTN4O43707 911 aaKnown RBP8.78□□□□□ -1
SKA2-210ENST00000584089 APLP1P51693 650 aa8.78□□□□□ -1
SKA2-210ENST00000584089 BEGAINQ9BUH8 593 aa8.78□□□□□ -1
SKA2-210ENST00000584089 DDRGK1Q96HY6 314 aa8.76□□□□□ -1.01
SKA2-210ENST00000584089 KDM4AO75164 1064 aa8.75□□□□□ -1.01
SKA2-210ENST00000584089 USP46P62068 366 aa8.75□□□□□ -1.01
SKA2-210ENST00000584089 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
SKA2-210ENST00000584089 DIXDC1Q155Q3 683 aa8.74□□□□□ -1.01
SKA2-210ENST00000584089 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
SKA2-210ENST00000584089 ATP6V1AP38606 617 aa8.73□□□□□ -1.01
SKA2-210ENST00000584089 FUT2Q10981 343 aa8.73□□□□□ -1.01
SKA2-210ENST00000584089 GRIPAP1Q4V328 841 aa8.73□□□□□ -1.01
SKA2-210ENST00000584089 PCDHB3Q9Y5E6 796 aa8.73□□□□□ -1.01
SKA2-210ENST00000584089 SPIRE2Q8WWL2 714 aa8.72□□□□□ -1.01
SKA2-210ENST00000584089 TBC1D2Q9BYX2 928 aa8.71□□□□□ -1.02
SKA2-210ENST00000584089 PLEKHG3A1L390 1219 aa8.7□□□□□ -1.02
SKA2-210ENST00000584089 RSPH6AQ9H0K4 717 aa8.7□□□□□ -1.02
SKA2-210ENST00000584089 HOXA2O43364 376 aa8.69□□□□□ -1.02
SKA2-210ENST00000584089 NR1I2O75469 434 aa8.69□□□□□ -1.02
SKA2-210ENST00000584089 TJAP1Q5JTD0 557 aa8.69□□□□□ -1.02
SKA2-210ENST00000584089 MORN1Q5T089 497 aa8.69□□□□□ -1.02
SKA2-210ENST00000584089 MTRQ99707 1265 aa8.69□□□□□ -1.02
SKA2-210ENST00000584089 GJA5P36382 358 aa8.68□□□□□ -1.02
SKA2-210ENST00000584089 PUS10Q3MIT2 529 aaKnown RBP8.68□□□□□ -1.02
SKA2-210ENST00000584089 BLOC1S3Q6QNY0 202 aa8.68□□□□□ -1.02
SKA2-210ENST00000584089 IL27Q8NEV9 243 aa8.68□□□□□ -1.02
SKA2-210ENST00000584089 IL21Q9HBE4 155 aa8.68□□□□□ -1.02
SKA2-210ENST00000584089 MOXD2PA6NHM9 499 aa8.67□□□□□ -1.02
SKA2-210ENST00000584089 ITGBL1O95965 494 aaPredicted RBP8.67□□□□□ -1.02
SKA2-210ENST00000584089 COPS2P61201 443 aa8.67□□□□□ -1.02
SKA2-210ENST00000584089 MYSM1Q5VVJ2 828 aa8.67□□□□□ -1.02
SKA2-210ENST00000584089 SCUBE3Q8IX30 993 aa8.66□□□□□ -1.02
SKA2-210ENST00000584089 SPTLC1O15269 473 aa8.65□□□□□ -1.02
SKA2-210ENST00000584089 FDX1P10109 184 aa8.65□□□□□ -1.02
SKA2-210ENST00000584089 NDUFV2P19404 249 aa8.65□□□□□ -1.02
SKA2-210ENST00000584089 KCNC4Q03721 635 aa8.65□□□□□ -1.02
SKA2-210ENST00000584089 SH3D19Q5HYK7 790 aa8.65□□□□□ -1.02
SKA2-210ENST00000584089 RSBN1LQ6PCB5 846 aaPredicted RBP8.65□□□□□ -1.02
SKA2-210ENST00000584089 GOPCQ9HD26 462 aa8.65□□□□□ -1.02
SKA2-210ENST00000584089 SLC27A5Q9Y2P5 690 aa8.65□□□□□ -1.02
SKA2-210ENST00000584089 SALL2Q9Y467 1007 aaPredicted RBP8.65□□□□□ -1.02
SKA2-210ENST00000584089 ZPR1O75312 459 aa8.64□□□□□ -1.03
SKA2-210ENST00000584089 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
SKA2-210ENST00000584089 Q3C1V9 767 aa8.64□□□□□ -1.03
SKA2-210ENST00000584089 RIC3Q7Z5B4 369 aa8.64□□□□□ -1.03
SKA2-210ENST00000584089 ZNF516Q92618 1163 aa8.64□□□□□ -1.03
SKA2-210ENST00000584089 HLA-CQ95604 372 aa8.64□□□□□ -1.03
SKA2-210ENST00000584089 TUSC1Q2TAM9 212 aa8.63□□□□□ -1.03
SKA2-210ENST00000584089 CLK2P49760 499 aaKnown RBP8.62□□□□□ -1.03
SKA2-210ENST00000584089 GUCA2AQ02747 115 aa8.62□□□□□ -1.03
SKA2-210ENST00000584089 IFFO2Q5TF58 517 aa8.62□□□□□ -1.03
SKA2-210ENST00000584089 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
SKA2-210ENST00000584089 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
SKA2-210ENST00000584089 FMNL1O95466 1100 aaPredicted RBP8.61□□□□□ -1.03
SKA2-210ENST00000584089 BRICD5Q6PL45 260 aa8.61□□□□□ -1.03
SKA2-210ENST00000584089 THAP11Q96EK4 314 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms