RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 DUOX2Q9NRD8 1548 aa15.46■□□□□ 0.07
CDK5RAP3-231ENST00000584063 PRDM10Q9NQV6 1147 aa15.46■□□□□ 0.07
CDK5RAP3-231ENST00000584063 VSIG10Q8N0Z9 540 aa15.45■□□□□ 0.06
CDK5RAP3-231ENST00000584063 NAP1L2Q9ULW6 460 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-231ENST00000584063 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
CDK5RAP3-231ENST00000584063 KANK1Q14678 1352 aa15.43■□□□□ 0.06
CDK5RAP3-231ENST00000584063 TMC1Q8TDI8 760 aa15.42■□□□□ 0.06
CDK5RAP3-231ENST00000584063 ZFP91Q96JP5 570 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-231ENST00000584063 ROCK2O75116 1388 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-231ENST00000584063 RALGAPBQ86X10 1494 aa15.42■□□□□ 0.06
CDK5RAP3-231ENST00000584063 ATP7AQ04656 1500 aa15.42■□□□□ 0.06
CDK5RAP3-231ENST00000584063 ZFYVE16Q7Z3T8 1539 aa15.41■□□□□ 0.06
CDK5RAP3-231ENST00000584063 WASHC2CQ9Y4E1 1318 aa15.41■□□□□ 0.06
CDK5RAP3-231ENST00000584063 TMED8Q6PL24 325 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-231ENST00000584063 RTEL1-TNFRSF6BF6WH68 1400 aa15.4■□□□□ 0.06
CDK5RAP3-231ENST00000584063 MAST1Q9Y2H9 1570 aa15.4■□□□□ 0.06
CDK5RAP3-231ENST00000584063 ZNF518AQ6AHZ1 1483 aa15.4■□□□□ 0.06
CDK5RAP3-231ENST00000584063 MLECQ14165 292 aa15.4■□□□□ 0.06
CDK5RAP3-231ENST00000584063 PNISRQ8TF01 805 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-231ENST00000584063 UHRF1BP1Q6BDS2 1440 aa15.4■□□□□ 0.06
CDK5RAP3-231ENST00000584063 POLR1AO95602 1720 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-231ENST00000584063 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-231ENST00000584063 PLA2R1Q13018 1463 aa15.39■□□□□ 0.05
CDK5RAP3-231ENST00000584063 ARAP3Q8WWN8 1544 aa15.39■□□□□ 0.05
CDK5RAP3-231ENST00000584063 SKAP1Q86WV1 359 aa15.38■□□□□ 0.05
CDK5RAP3-231ENST00000584063 PLXNC1O60486 1568 aa15.38■□□□□ 0.05
CDK5RAP3-231ENST00000584063 ZNF592Q92610 1267 aa15.38■□□□□ 0.05
CDK5RAP3-231ENST00000584063 CNPY4Q8N129 248 aa15.37■□□□□ 0.05
CDK5RAP3-231ENST00000584063 NUDCQ9Y266 331 aa15.36■□□□□ 0.05
CDK5RAP3-231ENST00000584063 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-231ENST00000584063 CC2D1BQ5T0F9 858 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-231ENST00000584063 POGZQ7Z3K3 1410 aa15.36■□□□□ 0.05
CDK5RAP3-231ENST00000584063 DIP2BQ9P265 1576 aa15.36■□□□□ 0.05
CDK5RAP3-231ENST00000584063 NUTM2DQ5VT03 806 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-231ENST00000584063 KDM5DQ9BY66 1539 aa15.35■□□□□ 0.05
CDK5RAP3-231ENST00000584063 NOP58Q9Y2X3 529 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-231ENST00000584063 CHMP4BQ9H444 224 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-231ENST00000584063 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-231ENST00000584063 KIDINS220Q9ULH0 1771 aa15.34■□□□□ 0.05
CDK5RAP3-231ENST00000584063 A2MP01023 1474 aa15.33■□□□□ 0.05
CDK5RAP3-231ENST00000584063 INO80Q9ULG1 1556 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-231ENST00000584063 PRAG1Q86YV5 1406 aa15.33■□□□□ 0.04
CDK5RAP3-231ENST00000584063 YEATS2Q9ULM3 1422 aa15.33■□□□□ 0.04
CDK5RAP3-231ENST00000584063 DISP3Q9P2K9 1392 aa15.33■□□□□ 0.04
CDK5RAP3-231ENST00000584063 MAP3K4Q9Y6R4 1608 aa15.33■□□□□ 0.04
CDK5RAP3-231ENST00000584063 CFAP65Q6ZU64 1925 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-231ENST00000584063 EXOC6Q8TAG9 804 aa15.32■□□□□ 0.04
CDK5RAP3-231ENST00000584063 PLIN1O60240 522 aa15.31■□□□□ 0.04
CDK5RAP3-231ENST00000584063 UNC13BO14795 1591 aa15.31■□□□□ 0.04
CDK5RAP3-231ENST00000584063 SMG6Q86US8 1419 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-231ENST00000584063 HMGB1P09429 215 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-231ENST00000584063 CDCA7LQ96GN5 454 aa15.3■□□□□ 0.04
CDK5RAP3-231ENST00000584063 PUS7Q96PZ0 661 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-231ENST00000584063 MYBBP1AQ9BQG0 1328 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-231ENST00000584063 NEO1Q92859 1461 aa15.28■□□□□ 0.04
CDK5RAP3-231ENST00000584063 TESK2Q96S53 571 aa15.28■□□□□ 0.04
CDK5RAP3-231ENST00000584063 IQGAP3Q86VI3 1631 aa15.28■□□□□ 0.04
CDK5RAP3-231ENST00000584063 PANK3Q9H999 370 aa15.27■□□□□ 0.04
CDK5RAP3-231ENST00000584063 CFAP74Q9C0B2 1584 aa15.27■□□□□ 0.04
CDK5RAP3-231ENST00000584063 ABCA6Q8N139 1617 aa15.27■□□□□ 0.03
CDK5RAP3-231ENST00000584063 ARID4BQ4LE39 1312 aaPredicted RBP15.27■□□□□ 0.03
CDK5RAP3-231ENST00000584063 PER1O15534 1290 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-231ENST00000584063 SECISBP2LQ93073 1101 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-231ENST00000584063 KIF13AQ9H1H9 1805 aa15.26■□□□□ 0.03
CDK5RAP3-231ENST00000584063 COL17A1Q9UMD9 1497 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-231ENST00000584063 ANP32AP39687 249 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-231ENST00000584063 TICAM2Q86XR7 235 aa15.26■□□□□ 0.03
CDK5RAP3-231ENST00000584063 LAS1LQ9Y4W2 734 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-231ENST00000584063 UGGT1Q9NYU2 1555 aa15.26■□□□□ 0.03
CDK5RAP3-231ENST00000584063 HECW2Q9P2P5 1572 aa15.26■□□□□ 0.03
CDK5RAP3-231ENST00000584063 TRPM1Q7Z4N2 1603 aa15.26■□□□□ 0.03
CDK5RAP3-231ENST00000584063 ATP10AO60312 1499 aa15.25■□□□□ 0.03
CDK5RAP3-231ENST00000584063 ARID3AQ99856 593 aa15.25■□□□□ 0.03
CDK5RAP3-231ENST00000584063 PPRC1Q5VV67 1664 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-231ENST00000584063 GLI2P10070 1586 aa15.25■□□□□ 0.03
CDK5RAP3-231ENST00000584063 MAGI2Q86UL8 1455 aa15.25■□□□□ 0.03
CDK5RAP3-231ENST00000584063 NCLP19338 710 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-231ENST00000584063 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
CDK5RAP3-231ENST00000584063 CFAP70Q5T0N1 1121 aa15.24■□□□□ 0.03
CDK5RAP3-231ENST00000584063 FRMPD1Q5SYB0 1578 aa15.24■□□□□ 0.03
CDK5RAP3-231ENST00000584063 FBXO31Q5XUX0 539 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-231ENST00000584063 ZBTB47Q9UFB7 747 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-231ENST00000584063 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-231ENST00000584063 RICTORQ6R327 1708 aa15.23■□□□□ 0.03
CDK5RAP3-231ENST00000584063 E9PCH4 1651 aa15.22■□□□□ 0.03
CDK5RAP3-231ENST00000584063 ADGRF5Q8IZF2 1346 aa15.22■□□□□ 0.03
CDK5RAP3-231ENST00000584063 KTN1Q86UP2 1357 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-231ENST00000584063 RALBP1Q15311 655 aa15.22■□□□□ 0.03
CDK5RAP3-231ENST00000584063 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
CDK5RAP3-231ENST00000584063 BRD4O60885 1362 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-231ENST00000584063 IPO9Q96P70 1041 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-231ENST00000584063 ZNF428Q96B54 188 aa15.2■□□□□ 0.02
CDK5RAP3-231ENST00000584063 ESF1Q9H501 851 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-231ENST00000584063 RCAN3Q9UKA8 241 aa15.2■□□□□ 0.02
CDK5RAP3-231ENST00000584063 DIP2CQ9Y2E4 1556 aa15.2■□□□□ 0.02
CDK5RAP3-231ENST00000584063 PARD3Q8TEW0 1356 aa15.2■□□□□ 0.02
CDK5RAP3-231ENST00000584063 CEP152O94986 1710 aa15.2■□□□□ 0.02
CDK5RAP3-231ENST00000584063 NLRP13Q86W25 1043 aa15.2■□□□□ 0.02
CDK5RAP3-231ENST00000584063 RNF123Q5XPI4 1314 aa15.2■□□□□ 0.02
CDK5RAP3-231ENST00000584063 MROH1Q8NDA8 1641 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms