RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 AGLP35573 1532 aa7.75□□□□□ -1.17
CRLF3-204ENST00000583527 DDX10Q13206 875 aaKnown RBP7.75□□□□□ -1.17
CRLF3-204ENST00000583527 YTHDC1Q96MU7 727 aaKnown RBP7.75□□□□□ -1.17
CRLF3-204ENST00000583527 U3KPZ7 1027 aaPredicted RBP7.75□□□□□ -1.17
CRLF3-204ENST00000583527 CLTCQ00610 1675 aaKnown RBP7.75□□□□□ -1.17
CRLF3-204ENST00000583527 KIF3BO15066 747 aa7.74□□□□□ -1.17
CRLF3-204ENST00000583527 CYB5RLQ6IPT4 315 aa7.74□□□□□ -1.17
CRLF3-204ENST00000583527 NRXN1Q9ULB1 1477 aa7.74□□□□□ -1.17
CRLF3-204ENST00000583527 MYT1LQ9UL68 1186 aa7.73□□□□□ -1.17
CRLF3-204ENST00000583527 KIF7Q2M1P5 1343 aa7.73□□□□□ -1.17
CRLF3-204ENST00000583527 KDM5AP29375 1690 aaKnown RBP7.73□□□□□ -1.17
CRLF3-204ENST00000583527 NEXMIFQ5QGS0 1516 aa7.73□□□□□ -1.17
CRLF3-204ENST00000583527 SETBP1Q9Y6X0 1596 aa7.72□□□□□ -1.17
CRLF3-204ENST00000583527 NOS1P29475 1434 aa7.72□□□□□ -1.17
CRLF3-204ENST00000583527 QRICH2Q9H0J4 1663 aa7.72□□□□□ -1.17
CRLF3-204ENST00000583527 ARHGAP31Q2M1Z3 1444 aa7.71□□□□□ -1.17
CRLF3-204ENST00000583527 ARHGEF28Q8N1W1 1705 aaKnown RBP7.71□□□□□ -1.18
CRLF3-204ENST00000583527 ERVK-7P63135 1459 aa7.7□□□□□ -1.18
CRLF3-204ENST00000583527 RAPGEF3O95398 923 aa7.7□□□□□ -1.18
CRLF3-204ENST00000583527 DCAF11Q8TEB1 546 aa7.7□□□□□ -1.18
CRLF3-204ENST00000583527 SPATA31D1Q6ZQQ2 1576 aa7.7□□□□□ -1.18
CRLF3-204ENST00000583527 TMEM131LA2VDJ0 1609 aa7.7□□□□□ -1.18
CRLF3-204ENST00000583527 SCAF11Q99590 1463 aaKnown RBP7.69□□□□□ -1.18
CRLF3-204ENST00000583527 ADGRB1O14514 1584 aa7.69□□□□□ -1.18
CRLF3-204ENST00000583527 CARD11Q9BXL7 1154 aa7.69□□□□□ -1.18
CRLF3-204ENST00000583527 PIK3C2GO75747 1445 aa7.69□□□□□ -1.18
CRLF3-204ENST00000583527 ASXL1Q8IXJ9 1541 aa7.68□□□□□ -1.18
CRLF3-204ENST00000583527 CCER2I3L3R5 266 aa7.68□□□□□ -1.18
CRLF3-204ENST00000583527 ANP32CO43423 234 aa7.68□□□□□ -1.18
CRLF3-204ENST00000583527 FAM69CQ0P6D2 419 aa7.68□□□□□ -1.18
CRLF3-204ENST00000583527 SETD1AO15047 1707 aaKnown RBP7.67□□□□□ -1.18
CRLF3-204ENST00000583527 C11orf95C9JLR9 678 aaPredicted RBP7.67□□□□□ -1.18
CRLF3-204ENST00000583527 RGL3Q3MIN7 710 aa7.67□□□□□ -1.18
CRLF3-204ENST00000583527 KDM2AQ9Y2K7 1162 aa7.67□□□□□ -1.18
CRLF3-204ENST00000583527 DISP3Q9P2K9 1392 aa7.67□□□□□ -1.18
CRLF3-204ENST00000583527 FER1L4A9Z1Z3 1794 aa7.66□□□□□ -1.18
CRLF3-204ENST00000583527 ARID4BQ4LE39 1312 aaPredicted RBP7.66□□□□□ -1.18
CRLF3-204ENST00000583527 EIF3AQ14152 1382 aaKnown RBP7.66□□□□□ -1.18
CRLF3-204ENST00000583527 ST20-MTHFSA0A0A6YYL1 179 aa7.63□□□□□ -1.19
CRLF3-204ENST00000583527 NBPF1Q3BBV0 1214 aa7.63□□□□□ -1.19
CRLF3-204ENST00000583527 GGT6Q6P531 493 aa7.63□□□□□ -1.19
CRLF3-204ENST00000583527 KNDC1Q76NI1 1749 aa7.63□□□□□ -1.19
CRLF3-204ENST00000583527 USP32Q8NFA0 1604 aa7.63□□□□□ -1.19
CRLF3-204ENST00000583527 NRXN3Q9Y4C0 1643 aa7.63□□□□□ -1.19
CRLF3-204ENST00000583527 WASHC2CQ9Y4E1 1318 aa7.62□□□□□ -1.19
CRLF3-204ENST00000583527 UBR1Q8IWV7 1749 aa7.62□□□□□ -1.19
CRLF3-204ENST00000583527 SBNO2Q9Y2G9 1366 aa7.61□□□□□ -1.19
CRLF3-204ENST00000583527 C3P01024 1663 aa7.61□□□□□ -1.19
CRLF3-204ENST00000583527 ABCB7O75027 752 aa7.61□□□□□ -1.19
CRLF3-204ENST00000583527 STAC3Q96MF2 364 aa7.61□□□□□ -1.19
CRLF3-204ENST00000583527 TESK2Q96S53 571 aa7.61□□□□□ -1.19
CRLF3-204ENST00000583527 POLR3GLQ9BT43 218 aa7.61□□□□□ -1.19
CRLF3-204ENST00000583527 TULP4Q9NRJ4 1543 aa7.61□□□□□ -1.19
CRLF3-204ENST00000583527 ADGRF5Q8IZF2 1346 aa7.6□□□□□ -1.19
CRLF3-204ENST00000583527 PRKRIP1Q9H875 184 aaPredicted RBP7.6□□□□□ -1.19
CRLF3-204ENST00000583527 ZFYVE9O95405 1425 aa7.6□□□□□ -1.19
CRLF3-204ENST00000583527 A2ML1A8K2U0 1454 aa7.59□□□□□ -1.19
CRLF3-204ENST00000583527 KTN1Q86UP2 1357 aaKnown RBP7.59□□□□□ -1.2
CRLF3-204ENST00000583527 PARD3Q8TEW0 1356 aa7.59□□□□□ -1.2
CRLF3-204ENST00000583527 NPM3O75607 178 aaKnown RBP7.58□□□□□ -1.2
CRLF3-204ENST00000583527 GTF3C3Q9Y5Q9 886 aa7.58□□□□□ -1.2
CRLF3-204ENST00000583527 ALKQ9UM73 1620 aa7.58□□□□□ -1.2
CRLF3-204ENST00000583527 ANKRD26Q9UPS8 1709 aa7.58□□□□□ -1.2
CRLF3-204ENST00000583527 PTPRMP28827 1452 aa7.57□□□□□ -1.2
CRLF3-204ENST00000583527 CHGAP10645 457 aaKnown RBP7.57□□□□□ -1.2
CRLF3-204ENST00000583527 NCBP3Q53F19 620 aaKnown RBP7.57□□□□□ -1.2
CRLF3-204ENST00000583527 CPS1P31327 1500 aa7.57□□□□□ -1.2
CRLF3-204ENST00000583527 DLC1Q96QB1 1528 aa7.57□□□□□ -1.2
CRLF3-204ENST00000583527 RPGRIP1LQ68CZ1 1315 aa7.56□□□□□ -1.2
CRLF3-204ENST00000583527 TMF1P82094 1093 aa7.56□□□□□ -1.2
CRLF3-204ENST00000583527 MRS2Q9HD23 443 aa7.56□□□□□ -1.2
CRLF3-204ENST00000583527 KIF20BQ96Q89 1820 aa7.56□□□□□ -1.2
CRLF3-204ENST00000583527 ZNF142P52746 1687 aaPredicted RBP7.56□□□□□ -1.2
CRLF3-204ENST00000583527 RIMS1Q86UR5 1692 aaKnown RBP7.56□□□□□ -1.2
CRLF3-204ENST00000583527 TRHP20396 242 aaPredicted RBP7.55□□□□□ -1.2
CRLF3-204ENST00000583527 CCDC184Q52MB2 194 aa7.55□□□□□ -1.2
CRLF3-204ENST00000583527 CFAP70Q5T0N1 1121 aa7.55□□□□□ -1.2
CRLF3-204ENST00000583527 BRD4O60885 1362 aaPredicted RBP7.55□□□□□ -1.2
CRLF3-204ENST00000583527 MYBBP1AQ9BQG0 1328 aaKnown RBP7.54□□□□□ -1.2
CRLF3-204ENST00000583527 RIMS2Q9UQ26 1411 aa7.54□□□□□ -1.2
CRLF3-204ENST00000583527 CHRDL2Q6WN34 429 aa7.54□□□□□ -1.2
CRLF3-204ENST00000583527 SP7Q8TDD2 431 aaPredicted RBP7.54□□□□□ -1.2
CRLF3-204ENST00000583527 TNRQ92752 1358 aa7.54□□□□□ -1.2
CRLF3-204ENST00000583527 SHPRHQ149N8 1683 aa7.54□□□□□ -1.2
CRLF3-204ENST00000583527 CENPJQ9HC77 1338 aaPredicted RBP7.53□□□□□ -1.2
CRLF3-204ENST00000583527 ITSN1Q15811 1721 aa7.53□□□□□ -1.2
CRLF3-204ENST00000583527 SLC52A1Q9NWF4 448 aa7.53□□□□□ -1.2
CRLF3-204ENST00000583527 NLRP1Q9C000 1473 aa7.53□□□□□ -1.2
CRLF3-204ENST00000583527 ADGRB2O60241 1585 aa7.53□□□□□ -1.2
CRLF3-204ENST00000583527 BLMP54132 1417 aaPredicted RBP7.52□□□□□ -1.2
CRLF3-204ENST00000583527 YTHDC2Q9H6S0 1430 aaKnown RBP7.52□□□□□ -1.2
CRLF3-204ENST00000583527 TOPAZ1Q8N9V7 1692 aa7.52□□□□□ -1.21
CRLF3-204ENST00000583527 LRPPRCP42704 1394 aaKnown RBP7.52□□□□□ -1.21
CRLF3-204ENST00000583527 HNRNPUQ00839 825 aaKnown RBP eCLIP7.52□□□□□ -1.21
CRLF3-204ENST00000583527 C14orf93Q9H972 538 aaKnown RBP7.52□□□□□ -1.21
CRLF3-204ENST00000583527 DIP2AQ14689 1571 aa7.51□□□□□ -1.21
CRLF3-204ENST00000583527 CEP170BQ9Y4F5 1589 aaPredicted RBP7.51□□□□□ -1.21
CRLF3-204ENST00000583527 NPC1L1Q9UHC9 1359 aa7.51□□□□□ -1.21
CRLF3-204ENST00000583527 IDI1Q13907 227 aa7.51□□□□□ -1.21
CRLF3-204ENST00000583527 MLECQ14165 292 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms