RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
PDLIM1P3-201ENST00000582370 STAG3Q9UJ98 1225 aa13.57□□□□□ -0.24
PDLIM1P3-201ENST00000582370 ERBINQ96RT1 1412 aa13.56□□□□□ -0.24
PDLIM1P3-201ENST00000582370 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
PDLIM1P3-201ENST00000582370 MYO5BQ9ULV0 1848 aa13.56□□□□□ -0.24
PDLIM1P3-201ENST00000582370 SLC26A8Q96RN1 970 aa13.56□□□□□ -0.24
PDLIM1P3-201ENST00000582370 APLP2Q06481 763 aa13.55□□□□□ -0.24
PDLIM1P3-201ENST00000582370 LMTK2Q8IWU2 1503 aa13.54□□□□□ -0.24
PDLIM1P3-201ENST00000582370 RGS12O14924 1447 aa13.53□□□□□ -0.24
PDLIM1P3-201ENST00000582370 NHSL1Q5SYE7 1610 aa13.52□□□□□ -0.25
PDLIM1P3-201ENST00000582370 GCC2Q8IWJ2 1684 aa13.52□□□□□ -0.25
PDLIM1P3-201ENST00000582370 KANK1Q14678 1352 aa13.5□□□□□ -0.25
PDLIM1P3-201ENST00000582370 IDI1Q13907 227 aa13.5□□□□□ -0.25
PDLIM1P3-201ENST00000582370 NOS1P29475 1434 aa13.49□□□□□ -0.25
PDLIM1P3-201ENST00000582370 MYOM3Q5VTT5 1437 aa13.49□□□□□ -0.25
PDLIM1P3-201ENST00000582370 KIF15Q9NS87 1388 aa13.49□□□□□ -0.25
PDLIM1P3-201ENST00000582370 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
PDLIM1P3-201ENST00000582370 AFF2P51816 1311 aa13.49□□□□□ -0.25
PDLIM1P3-201ENST00000582370 FOXD1Q16676 465 aa13.49□□□□□ -0.25
PDLIM1P3-201ENST00000582370 CADPS2Q86UW7 1296 aa13.49□□□□□ -0.25
PDLIM1P3-201ENST00000582370 ZFYVE9O95405 1425 aa13.48□□□□□ -0.25
PDLIM1P3-201ENST00000582370 BCANQ96GW7 911 aa13.47□□□□□ -0.25
PDLIM1P3-201ENST00000582370 SETD5Q9C0A6 1442 aa13.47□□□□□ -0.25
PDLIM1P3-201ENST00000582370 ATAD2Q6PL18 1390 aa13.46□□□□□ -0.25
PDLIM1P3-201ENST00000582370 ASXL1Q8IXJ9 1541 aa13.46□□□□□ -0.25
PDLIM1P3-201ENST00000582370 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
PDLIM1P3-201ENST00000582370 TMEM131LA2VDJ0 1609 aa13.46□□□□□ -0.26
PDLIM1P3-201ENST00000582370 EP400Q96L91 3159 aa13.45□□□□□ -0.26
PDLIM1P3-201ENST00000582370 DCCP43146 1447 aa13.45□□□□□ -0.26
PDLIM1P3-201ENST00000582370 SETBP1Q9Y6X0 1596 aa13.45□□□□□ -0.26
PDLIM1P3-201ENST00000582370 PIK3R4Q99570 1358 aa13.45□□□□□ -0.26
PDLIM1P3-201ENST00000582370 RPRD2Q5VT52 1461 aaKnown RBP13.44□□□□□ -0.26
PDLIM1P3-201ENST00000582370 NUTM2BA6NNL0 878 aaPredicted RBP13.44□□□□□ -0.26
PDLIM1P3-201ENST00000582370 NUTM2EB1AL46 878 aaPredicted RBP13.44□□□□□ -0.26
PDLIM1P3-201ENST00000582370 ATF3P18847 181 aa13.44□□□□□ -0.26
PDLIM1P3-201ENST00000582370 C14orf37Q86TY3 774 aa13.44□□□□□ -0.26
PDLIM1P3-201ENST00000582370 NUTM2AQ8IVF1 878 aaPredicted RBP13.44□□□□□ -0.26
PDLIM1P3-201ENST00000582370 C19orf44Q9H6X5 657 aa13.44□□□□□ -0.26
PDLIM1P3-201ENST00000582370 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
PDLIM1P3-201ENST00000582370 NUTM2DQ5VT03 806 aaPredicted RBP13.43□□□□□ -0.26
PDLIM1P3-201ENST00000582370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDLIM1P3-201ENST00000582370 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
PDLIM1P3-201ENST00000582370 RIMS2Q9UQ26 1411 aa13.43□□□□□ -0.26
PDLIM1P3-201ENST00000582370 BRINP3Q76B58 766 aa13.42□□□□□ -0.26
PDLIM1P3-201ENST00000582370 TBX22Q9Y458 520 aa13.42□□□□□ -0.26
PDLIM1P3-201ENST00000582370 TRPM2O94759 1503 aa13.42□□□□□ -0.26
PDLIM1P3-201ENST00000582370 PPP1R15AO75807 674 aaPredicted RBP13.41□□□□□ -0.26
PDLIM1P3-201ENST00000582370 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
PDLIM1P3-201ENST00000582370 NGLY1Q96IV0 654 aa13.41□□□□□ -0.26
PDLIM1P3-201ENST00000582370 QTRT2Q9H974 415 aaKnown RBP13.41□□□□□ -0.26
PDLIM1P3-201ENST00000582370 ADAMTS13Q76LX8 1427 aa13.4□□□□□ -0.26
PDLIM1P3-201ENST00000582370 ABCC5O15440 1437 aa13.39□□□□□ -0.27
PDLIM1P3-201ENST00000582370 LRP5O75197 1615 aa13.39□□□□□ -0.27
PDLIM1P3-201ENST00000582370 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
PDLIM1P3-201ENST00000582370 XRN1Q8IZH2 1706 aaKnown RBP13.39□□□□□ -0.27
PDLIM1P3-201ENST00000582370 C8orf37Q96NL8 207 aa13.39□□□□□ -0.27
PDLIM1P3-201ENST00000582370 LAMC1P11047 1609 aa13.39□□□□□ -0.27
PDLIM1P3-201ENST00000582370 LRRC59Q96AG4 307 aaKnown RBP13.38□□□□□ -0.27
PDLIM1P3-201ENST00000582370 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
PDLIM1P3-201ENST00000582370 MST1RQ04912 1400 aa13.38□□□□□ -0.27
PDLIM1P3-201ENST00000582370 PNPLA6Q8IY17 1366 aa13.37□□□□□ -0.27
PDLIM1P3-201ENST00000582370 DAPK1P53355 1430 aa13.37□□□□□ -0.27
PDLIM1P3-201ENST00000582370 UNC13BO14795 1591 aa13.37□□□□□ -0.27
PDLIM1P3-201ENST00000582370 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDLIM1P3-201ENST00000582370 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
PDLIM1P3-201ENST00000582370 NALCNQ8IZF0 1738 aa13.35□□□□□ -0.27
PDLIM1P3-201ENST00000582370 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
PDLIM1P3-201ENST00000582370 CCDC125Q86Z20 511 aa13.34□□□□□ -0.27
PDLIM1P3-201ENST00000582370 COL22A1Q8NFW1 1626 aaPredicted RBP13.33□□□□□ -0.28
PDLIM1P3-201ENST00000582370 NRXN3Q9Y4C0 1643 aa13.32□□□□□ -0.28
PDLIM1P3-201ENST00000582370 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
PDLIM1P3-201ENST00000582370 TRPC5Q9UL62 973 aaPredicted RBP13.32□□□□□ -0.28
PDLIM1P3-201ENST00000582370 IQGAP3Q86VI3 1631 aa13.31□□□□□ -0.28
PDLIM1P3-201ENST00000582370 ATRNO75882 1429 aa13.31□□□□□ -0.28
PDLIM1P3-201ENST00000582370 PTCH1Q13635 1447 aa13.31□□□□□ -0.28
PDLIM1P3-201ENST00000582370 E9PCH4 1651 aa13.31□□□□□ -0.28
PDLIM1P3-201ENST00000582370 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.31□□□□□ -0.28
PDLIM1P3-201ENST00000582370 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
PDLIM1P3-201ENST00000582370 AMOTL2Q9Y2J4 779 aa13.3□□□□□ -0.28
PDLIM1P3-201ENST00000582370 ADGRL3Q9HAR2 1447 aa13.3□□□□□ -0.28
PDLIM1P3-201ENST00000582370 ADGRL2O95490 1459 aa13.29□□□□□ -0.28
PDLIM1P3-201ENST00000582370 USP21Q9UK80 565 aa13.29□□□□□ -0.28
PDLIM1P3-201ENST00000582370 ADAMTS2O95450 1211 aa13.28□□□□□ -0.28
PDLIM1P3-201ENST00000582370 FNBP4Q8N3X1 1017 aaPredicted RBP13.27□□□□□ -0.29
PDLIM1P3-201ENST00000582370 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.29
PDLIM1P3-201ENST00000582370 BLMP54132 1417 aaPredicted RBP13.26□□□□□ -0.29
PDLIM1P3-201ENST00000582370 KANK4Q5T7N3 995 aaPredicted RBP13.26□□□□□ -0.29
PDLIM1P3-201ENST00000582370 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
PDLIM1P3-201ENST00000582370 DDX17Q92841 729 aaKnown RBP13.25□□□□□ -0.29
PDLIM1P3-201ENST00000582370 C1orf167Q5SNV9 1468 aa13.24□□□□□ -0.29
PDLIM1P3-201ENST00000582370 ANKRD50Q9ULJ7 1429 aa13.24□□□□□ -0.29
PDLIM1P3-201ENST00000582370 SOS2Q07890 1332 aaPredicted RBP13.23□□□□□ -0.29
PDLIM1P3-201ENST00000582370 MYOM2P54296 1465 aa13.23□□□□□ -0.29
PDLIM1P3-201ENST00000582370 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
PDLIM1P3-201ENST00000582370 CHIC2Q9UKJ5 165 aa13.22□□□□□ -0.29
PDLIM1P3-201ENST00000582370 GLI3P10071 1580 aa13.21□□□□□ -0.29
PDLIM1P3-201ENST00000582370 GJD4Q96KN9 370 aaPredicted RBP13.18□□□□□ -0.3
PDLIM1P3-201ENST00000582370 METP08581 1390 aa13.18□□□□□ -0.3
PDLIM1P3-201ENST00000582370 RRBP1Q9P2E9 1410 aaKnown RBP13.17□□□□□ -0.3
PDLIM1P3-201ENST00000582370 RALGAPBQ86X10 1494 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms