RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 COL9A1P20849 921 aa15.03■□□□□ -0
CDH8-207ENST00000582242 BEGAINQ9BUH8 593 aa15.03■□□□□ -0
CDH8-207ENST00000582242 PPP1R3GB7ZBB8 358 aa15.02■□□□□ -0
CDH8-207ENST00000582242 RSPH6AQ9H0K4 717 aa15.02■□□□□ -0
CDH8-207ENST00000582242 ZMYND15Q9H091 742 aa15.01□□□□□ -0.01
CDH8-207ENST00000582242 FAM198AQ9UFP1 575 aa15.01□□□□□ -0.01
CDH8-207ENST00000582242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.99□□□□□ -0.01
CDH8-207ENST00000582242 FLIIQ13045 1269 aa14.99□□□□□ -0.01
CDH8-207ENST00000582242 SKIV2LQ15477 1246 aaKnown RBP14.99□□□□□ -0.01
CDH8-207ENST00000582242 ARXQ96QS3 562 aa14.98□□□□□ -0.01
CDH8-207ENST00000582242 SUPT5HO00267 1087 aaKnown RBP14.97□□□□□ -0.01
CDH8-207ENST00000582242 EYA1Q99502 592 aa14.97□□□□□ -0.01
CDH8-207ENST00000582242 TSKSQ9UJT2 592 aa14.97□□□□□ -0.01
CDH8-207ENST00000582242 ONECUT3O60422 494 aaPredicted RBP14.96□□□□□ -0.01
CDH8-207ENST00000582242 MRPL50Q8N5N7 158 aaKnown RBP14.95□□□□□ -0.02
CDH8-207ENST00000582242 RCCD1A6NED2 376 aa14.94□□□□□ -0.02
CDH8-207ENST00000582242 NBPF3Q9H094 633 aa14.94□□□□□ -0.02
CDH8-207ENST00000582242 PTPN5P54829 565 aa14.93□□□□□ -0.02
CDH8-207ENST00000582242 THSD4Q6ZMP0 1018 aa14.93□□□□□ -0.02
CDH8-207ENST00000582242 TRIM6-TRIM34B2RNG4 842 aa14.92□□□□□ -0.02
CDH8-207ENST00000582242 NBPF26B4DH59 902 aa14.92□□□□□ -0.02
CDH8-207ENST00000582242 GOLGA8CPA6NN73 597 aa14.91□□□□□ -0.02
CDH8-207ENST00000582242 MYSM1Q5VVJ2 828 aa14.91□□□□□ -0.02
CDH8-207ENST00000582242 DIXDC1Q155Q3 683 aa14.9□□□□□ -0.02
CDH8-207ENST00000582242 WNT2BQ93097 391 aa14.9□□□□□ -0.02
CDH8-207ENST00000582242 NUDT18Q6ZVK8 323 aa14.89□□□□□ -0.03
CDH8-207ENST00000582242 C3orf80F5H4A9 247 aa14.88□□□□□ -0.03
CDH8-207ENST00000582242 DNAJB2P25686 324 aa14.88□□□□□ -0.03
CDH8-207ENST00000582242 PROX2Q3B8N5 592 aa14.88□□□□□ -0.03
CDH8-207ENST00000582242 TATDN2Q93075 761 aa14.88□□□□□ -0.03
CDH8-207ENST00000582242 RABGEF1Q9UJ41 708 aa14.88□□□□□ -0.03
CDH8-207ENST00000582242 PACS2Q86VP3 889 aa14.87□□□□□ -0.03
CDH8-207ENST00000582242 TBC1D2Q9BYX2 928 aa14.87□□□□□ -0.03
CDH8-207ENST00000582242 SULF1Q8IWU6 871 aa14.86□□□□□ -0.03
CDH8-207ENST00000582242 PROCA1Q8NCQ7 364 aaPredicted RBP14.86□□□□□ -0.03
CDH8-207ENST00000582242 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDH8-207ENST00000582242 POLR3EQ9NVU0 708 aa14.86□□□□□ -0.03
CDH8-207ENST00000582242 PNMA3Q9UL41 463 aa14.86□□□□□ -0.03
CDH8-207ENST00000582242 CD46P15529 392 aa14.85□□□□□ -0.03
CDH8-207ENST00000582242 CLK2P49760 499 aaKnown RBP14.85□□□□□ -0.03
CDH8-207ENST00000582242 TMEM134Q9H6X4 195 aa14.84□□□□□ -0.03
CDH8-207ENST00000582242 MCM6Q14566 821 aa14.81□□□□□ -0.04
CDH8-207ENST00000582242 SPIRE2Q8WWL2 714 aa14.8□□□□□ -0.04
CDH8-207ENST00000582242 LAPTM4BQ86VI4 370 aa14.78□□□□□ -0.04
CDH8-207ENST00000582242 ATP1B4Q9UN42 357 aaPredicted RBP14.78□□□□□ -0.04
CDH8-207ENST00000582242 DDX11L8A8MPP1 907 aa14.77□□□□□ -0.05
CDH8-207ENST00000582242 IFFO2Q5TF58 517 aa14.77□□□□□ -0.05
CDH8-207ENST00000582242 HOMEZQ8IX15 550 aa14.77□□□□□ -0.05
CDH8-207ENST00000582242 ANKK1Q8NFD2 765 aa14.77□□□□□ -0.05
CDH8-207ENST00000582242 SMAPO00193 183 aa14.76□□□□□ -0.05
CDH8-207ENST00000582242 TUSC1Q2TAM9 212 aa14.76□□□□□ -0.05
CDH8-207ENST00000582242 KIAA1468Q9P260 1216 aa14.76□□□□□ -0.05
CDH8-207ENST00000582242 A6NJR5 290 aa14.75□□□□□ -0.05
CDH8-207ENST00000582242 LIMD1Q9UGP4 676 aa14.75□□□□□ -0.05
CDH8-207ENST00000582242 RIC3Q7Z5B4 369 aa14.74□□□□□ -0.05
CDH8-207ENST00000582242 SPTLC1O15269 473 aa14.73□□□□□ -0.05
CDH8-207ENST00000582242 UBTFP17480 764 aaKnown RBP14.73□□□□□ -0.05
CDH8-207ENST00000582242 NUTM1Q86Y26 1132 aa14.73□□□□□ -0.05
CDH8-207ENST00000582242 GJA5P36382 358 aa14.72□□□□□ -0.05
CDH8-207ENST00000582242 PPP2R2DQ66LE6 453 aa14.72□□□□□ -0.05
CDH8-207ENST00000582242 RFC5P40937 340 aa14.71□□□□□ -0.05
CDH8-207ENST00000582242 RSBN1LQ6PCB5 846 aaPredicted RBP14.71□□□□□ -0.05
CDH8-207ENST00000582242 BANK1Q8NDB2 785 aa14.7□□□□□ -0.06
CDH8-207ENST00000582242 CLUAP1Q96AJ1 413 aa14.7□□□□□ -0.06
CDH8-207ENST00000582242 ZFRQ96KR1 1074 aaKnown RBP14.7□□□□□ -0.06
CDH8-207ENST00000582242 SOWAHBA6NEL2 793 aa14.69□□□□□ -0.06
CDH8-207ENST00000582242 SPDYE5A6NIY4 337 aa14.69□□□□□ -0.06
CDH8-207ENST00000582242 BCAMP50895 628 aa14.69□□□□□ -0.06
CDH8-207ENST00000582242 SEPT9Q9UHD8 586 aaPredicted RBP14.69□□□□□ -0.06
CDH8-207ENST00000582242 FBXO31Q5XUX0 539 aaPredicted RBP14.68□□□□□ -0.06
CDH8-207ENST00000582242 RDH13Q8NBN7 331 aa14.68□□□□□ -0.06
CDH8-207ENST00000582242 MOXD2PA6NHM9 499 aa14.67□□□□□ -0.06
CDH8-207ENST00000582242 TMEM259Q4ZIN3 620 aa14.66□□□□□ -0.06
CDH8-207ENST00000582242 FAM98CQ17RN3 349 aaKnown RBP14.65□□□□□ -0.06
CDH8-207ENST00000582242 RSPH4AQ5TD94 716 aa14.65□□□□□ -0.06
CDH8-207ENST00000582242 C1orf115Q9H7X2 142 aa14.65□□□□□ -0.06
CDH8-207ENST00000582242 A0A0G2JS52 829 aa14.64□□□□□ -0.07
CDH8-207ENST00000582242 KDM4AO75164 1064 aa14.64□□□□□ -0.07
CDH8-207ENST00000582242 USP46P62068 366 aa14.64□□□□□ -0.07
CDH8-207ENST00000582242 TRAK2O60296 914 aa14.63□□□□□ -0.07
CDH8-207ENST00000582242 GCGRP47871 477 aa14.63□□□□□ -0.07
CDH8-207ENST00000582242 SWT1Q5T5J6 900 aaKnown RBP14.63□□□□□ -0.07
CDH8-207ENST00000582242 ITGBL1O95965 494 aaPredicted RBP14.62□□□□□ -0.07
CDH8-207ENST00000582242 LILRB3O75022 631 aa14.61□□□□□ -0.07
CDH8-207ENST00000582242 RGS20O76081 388 aa14.61□□□□□ -0.07
CDH8-207ENST00000582242 NDUFV2P19404 249 aa14.61□□□□□ -0.07
CDH8-207ENST00000582242 NYAP1Q6ZVC0 841 aa14.61□□□□□ -0.07
CDH8-207ENST00000582242 SLC10A3P09131 477 aa14.6□□□□□ -0.07
CDH8-207ENST00000582242 HOXA2O43364 376 aa14.59□□□□□ -0.07
CDH8-207ENST00000582242 RAD21O60216 631 aa14.59□□□□□ -0.07
CDH8-207ENST00000582242 QPCTQ16769 361 aa14.59□□□□□ -0.07
CDH8-207ENST00000582242 PRPF38BQ5VTL8 546 aaKnown RBP14.59□□□□□ -0.07
CDH8-207ENST00000582242 PROSER2Q86WR7 435 aaPredicted RBP14.59□□□□□ -0.07
CDH8-207ENST00000582242 SNRKQ9NRH2 765 aa14.59□□□□□ -0.07
CDH8-207ENST00000582242 WBP1LQ9NX94 342 aa14.59□□□□□ -0.07
CDH8-207ENST00000582242 ARID3CA6NKF2 412 aa14.58□□□□□ -0.08
CDH8-207ENST00000582242 APBB1O00213 710 aa14.58□□□□□ -0.08
CDH8-207ENST00000582242 CSPP1Q1MSJ5 1256 aa14.58□□□□□ -0.08
CDH8-207ENST00000582242 POM121Q96HA1 1249 aa14.58□□□□□ -0.08
CDH8-207ENST00000582242 PCDHB15Q9Y5E8 787 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms