RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 DMRT2Q9Y5R5 561 aa20.42■□□□□ 0.86
MKS1-211ENST00000581761 CEP170BQ9Y4F5 1589 aaPredicted RBP20.42■□□□□ 0.86
MKS1-211ENST00000581761 STRCQ7RTU9 1775 aa20.41■□□□□ 0.86
MKS1-211ENST00000581761 C11orf95C9JLR9 678 aaPredicted RBP20.41■□□□□ 0.86
MKS1-211ENST00000581761 STAC3Q96MF2 364 aa20.41■□□□□ 0.86
MKS1-211ENST00000581761 A2ML1A8K2U0 1454 aa20.41■□□□□ 0.86
MKS1-211ENST00000581761 CFAP65Q6ZU64 1925 aaKnown RBP20.41■□□□□ 0.86
MKS1-211ENST00000581761 NOS1P29475 1434 aa20.4■□□□□ 0.86
MKS1-211ENST00000581761 GPRASP1Q5JY77 1395 aa20.4■□□□□ 0.86
MKS1-211ENST00000581761 POLR1AO95602 1720 aaPredicted RBP20.39■□□□□ 0.86
MKS1-211ENST00000581761 ZNF142P52746 1687 aaPredicted RBP20.39■□□□□ 0.86
MKS1-211ENST00000581761 LAMC1P11047 1609 aa20.39■□□□□ 0.86
MKS1-211ENST00000581761 NLRP1Q9C000 1473 aa20.38■□□□□ 0.85
MKS1-211ENST00000581761 KIF7Q2M1P5 1343 aa20.38■□□□□ 0.85
MKS1-211ENST00000581761 ANP32CO43423 234 aa20.38■□□□□ 0.85
MKS1-211ENST00000581761 NBPF1Q3BBV0 1214 aa20.38■□□□□ 0.85
MKS1-211ENST00000581761 YTHDC1Q96MU7 727 aaKnown RBP20.37■□□□□ 0.85
MKS1-211ENST00000581761 SYNMO15061 1565 aa20.37■□□□□ 0.85
MKS1-211ENST00000581761 IDI1Q13907 227 aa20.36■□□□□ 0.85
MKS1-211ENST00000581761 ADGRB3O60242 1522 aa20.36■□□□□ 0.85
MKS1-211ENST00000581761 CHGAP10645 457 aaKnown RBP20.35■□□□□ 0.85
MKS1-211ENST00000581761 CENPBP07199 599 aaPredicted RBP20.34■□□□□ 0.85
MKS1-211ENST00000581761 FBXO41Q8TF61 875 aa20.34■□□□□ 0.85
MKS1-211ENST00000581761 MYOM2P54296 1465 aa20.34■□□□□ 0.85
MKS1-211ENST00000581761 ST20-MTHFSA0A0A6YYL1 179 aa20.33■□□□□ 0.85
MKS1-211ENST00000581761 NCKAP5LQ9HCH0 1330 aa20.31■□□□□ 0.84
MKS1-211ENST00000581761 IFT172Q9UG01 1749 aa20.31■□□□□ 0.84
MKS1-211ENST00000581761 THEMISQ8N1K5 641 aaPredicted RBP20.3■□□□□ 0.84
MKS1-211ENST00000581761 POLR3GLQ9BT43 218 aa20.3■□□□□ 0.84
MKS1-211ENST00000581761 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
MKS1-211ENST00000581761 CERKQ8TCT0 537 aa20.29■□□□□ 0.84
MKS1-211ENST00000581761 SLC52A1Q9NWF4 448 aa20.29■□□□□ 0.84
MKS1-211ENST00000581761 KIAA1210Q9ULL0 1709 aa20.27■□□□□ 0.84
MKS1-211ENST00000581761 CCER2I3L3R5 266 aa20.27■□□□□ 0.84
MKS1-211ENST00000581761 UBR1Q8IWV7 1749 aa20.27■□□□□ 0.83
MKS1-211ENST00000581761 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.83
MKS1-211ENST00000581761 ADGRF5Q8IZF2 1346 aa20.26■□□□□ 0.83
MKS1-211ENST00000581761 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
MKS1-211ENST00000581761 PPLO60437 1756 aa20.24■□□□□ 0.83
MKS1-211ENST00000581761 IQGAP1P46940 1657 aa20.23■□□□□ 0.83
MKS1-211ENST00000581761 SCAF11Q99590 1463 aaKnown RBP20.23■□□□□ 0.83
MKS1-211ENST00000581761 LTKP29376 864 aa20.22■□□□□ 0.83
MKS1-211ENST00000581761 ARHGAP23Q9P227 1491 aa20.22■□□□□ 0.83
MKS1-211ENST00000581761 ANKLE2Q86XL3 938 aa20.21■□□□□ 0.83
MKS1-211ENST00000581761 STAG3Q9UJ98 1225 aa20.21■□□□□ 0.83
MKS1-211ENST00000581761 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
MKS1-211ENST00000581761 CFAP70Q5T0N1 1121 aa20.2■□□□□ 0.82
MKS1-211ENST00000581761 SLIT1O75093 1534 aa20.2■□□□□ 0.82
MKS1-211ENST00000581761 TMEM131LA2VDJ0 1609 aa20.18■□□□□ 0.82
MKS1-211ENST00000581761 TESK2Q96S53 571 aa20.18■□□□□ 0.82
MKS1-211ENST00000581761 KDM5AP29375 1690 aaKnown RBP20.18■□□□□ 0.82
MKS1-211ENST00000581761 EIF3AQ14152 1382 aaKnown RBP20.18■□□□□ 0.82
MKS1-211ENST00000581761 NEXMIFQ5QGS0 1516 aa20.17■□□□□ 0.82
MKS1-211ENST00000581761 TXNDC2Q86VQ3 553 aa20.17■□□□□ 0.82
MKS1-211ENST00000581761 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
MKS1-211ENST00000581761 TMF1P82094 1093 aa20.16■□□□□ 0.82
MKS1-211ENST00000581761 MED14O60244 1454 aa20.16■□□□□ 0.82
MKS1-211ENST00000581761 ZNF335Q9H4Z2 1342 aaPredicted RBP20.15■□□□□ 0.82
MKS1-211ENST00000581761 DISP3Q9P2K9 1392 aa20.15■□□□□ 0.82
MKS1-211ENST00000581761 LTBP4Q8N2S1 1624 aa20.14■□□□□ 0.81
MKS1-211ENST00000581761 SETBP1Q9Y6X0 1596 aa20.14■□□□□ 0.81
MKS1-211ENST00000581761 NPHP4O75161 1426 aaPredicted RBP20.14■□□□□ 0.81
MKS1-211ENST00000581761 ZFYVE9O95405 1425 aa20.14■□□□□ 0.81
MKS1-211ENST00000581761 VGFO15240 615 aaPredicted RBP20.13■□□□□ 0.81
MKS1-211ENST00000581761 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
MKS1-211ENST00000581761 PRKRIP1Q9H875 184 aaPredicted RBP20.12■□□□□ 0.81
MKS1-211ENST00000581761 C14orf93Q9H972 538 aaKnown RBP20.12■□□□□ 0.81
MKS1-211ENST00000581761 NUTM2DQ5VT03 806 aaPredicted RBP20.11■□□□□ 0.81
MKS1-211ENST00000581761 EID1Q9Y6B2 187 aa20.11■□□□□ 0.81
MKS1-211ENST00000581761 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
MKS1-211ENST00000581761 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
MKS1-211ENST00000581761 ADGRB1O14514 1584 aa20.07■□□□□ 0.8
MKS1-211ENST00000581761 CDCA8Q53HL2 280 aa20.06■□□□□ 0.8
MKS1-211ENST00000581761 SLC24A1O60721 1099 aa20.03■□□□□ 0.8
MKS1-211ENST00000581761 IQSEC2Q5JU85 1478 aa20.03■□□□□ 0.8
MKS1-211ENST00000581761 CNGB1Q14028 1251 aaPredicted RBP20.02■□□□□ 0.8
MKS1-211ENST00000581761 TMEM132EQ6IEE7 984 aa20.02■□□□□ 0.8
MKS1-211ENST00000581761 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.02■□□□□ 0.8
MKS1-211ENST00000581761 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
MKS1-211ENST00000581761 TRAK1Q9UPV9 953 aa20.02■□□□□ 0.8
MKS1-211ENST00000581761 PLEKHG1Q9ULL1 1385 aa20.02■□□□□ 0.8
MKS1-211ENST00000581761 CENPJQ9HC77 1338 aaPredicted RBP20.02■□□□□ 0.79
MKS1-211ENST00000581761 HDGFP51858 240 aaKnown RBP20.01■□□□□ 0.79
MKS1-211ENST00000581761 SBNO2Q9Y2G9 1366 aa19.98■□□□□ 0.79
MKS1-211ENST00000581761 CCDC184Q52MB2 194 aa19.98■□□□□ 0.79
MKS1-211ENST00000581761 PANK3Q9H999 370 aa19.98■□□□□ 0.79
MKS1-211ENST00000581761 MRS2Q9HD23 443 aa19.98■□□□□ 0.79
MKS1-211ENST00000581761 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
MKS1-211ENST00000581761 UBAP1LF5GYI3 381 aa19.97■□□□□ 0.79
MKS1-211ENST00000581761 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
MKS1-211ENST00000581761 KTN1Q86UP2 1357 aaKnown RBP19.96■□□□□ 0.79
MKS1-211ENST00000581761 BCANQ96GW7 911 aa19.96■□□□□ 0.79
MKS1-211ENST00000581761 QRICH2Q9H0J4 1663 aa19.96■□□□□ 0.79
MKS1-211ENST00000581761 CPS1P31327 1500 aa19.96■□□□□ 0.79
MKS1-211ENST00000581761 RALBP1Q15311 655 aa19.95■□□□□ 0.78
MKS1-211ENST00000581761 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
MKS1-211ENST00000581761 TBX22Q9Y458 520 aa19.94■□□□□ 0.78
MKS1-211ENST00000581761 ARHGEF28Q8N1W1 1705 aaKnown RBP19.93■□□□□ 0.78
MKS1-211ENST00000581761 PER1O15534 1290 aaPredicted RBP19.93■□□□□ 0.78
MKS1-211ENST00000581761 ALKQ9UM73 1620 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms