RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 CHD2O14647 1828 aaKnown RBP19.97■□□□□ 0.79
CSNK1D-218ENST00000581655 KANK4Q5T7N3 995 aaPredicted RBP19.96■□□□□ 0.79
CSNK1D-218ENST00000581655 CROCC2H7BZ55 1655 aa19.96■□□□□ 0.79
CSNK1D-218ENST00000581655 LMTK2Q8IWU2 1503 aa19.96■□□□□ 0.79
CSNK1D-218ENST00000581655 NOS1P29475 1434 aa19.95■□□□□ 0.78
CSNK1D-218ENST00000581655 ABCC5O15440 1437 aa19.94■□□□□ 0.78
CSNK1D-218ENST00000581655 RXRBP28702 533 aa19.94■□□□□ 0.78
CSNK1D-218ENST00000581655 SHPRHQ149N8 1683 aa19.94■□□□□ 0.78
CSNK1D-218ENST00000581655 SRCAPQ6ZRS2 3230 aa19.93■□□□□ 0.78
CSNK1D-218ENST00000581655 AHDC1Q5TGY3 1603 aaPredicted RBP19.92■□□□□ 0.78
CSNK1D-218ENST00000581655 C14orf37Q86TY3 774 aa19.92■□□□□ 0.78
CSNK1D-218ENST00000581655 PLEKHG1Q9ULL1 1385 aa19.92■□□□□ 0.78
CSNK1D-218ENST00000581655 SLC52A1Q9NWF4 448 aa19.91■□□□□ 0.78
CSNK1D-218ENST00000581655 MYO5BQ9ULV0 1848 aa19.9■□□□□ 0.78
CSNK1D-218ENST00000581655 ZFYVE9O95405 1425 aa19.9■□□□□ 0.78
CSNK1D-218ENST00000581655 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
CSNK1D-218ENST00000581655 NCOA3Q9Y6Q9 1424 aa19.9■□□□□ 0.78
CSNK1D-218ENST00000581655 PPP1R15AO75807 674 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-218ENST00000581655 CDK12Q9NYV4 1490 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-218ENST00000581655 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.88■□□□□ 0.77
CSNK1D-218ENST00000581655 NUTM2BA6NNL0 878 aaPredicted RBP19.88■□□□□ 0.77
CSNK1D-218ENST00000581655 NUTM2EB1AL46 878 aaPredicted RBP19.88■□□□□ 0.77
CSNK1D-218ENST00000581655 NUTM2AQ8IVF1 878 aaPredicted RBP19.88■□□□□ 0.77
CSNK1D-218ENST00000581655 DAPK1P53355 1430 aa19.87■□□□□ 0.77
CSNK1D-218ENST00000581655 RIMS2Q9UQ26 1411 aa19.87■□□□□ 0.77
CSNK1D-218ENST00000581655 CADPS2Q86UW7 1296 aa19.87■□□□□ 0.77
CSNK1D-218ENST00000581655 PTPN23Q9H3S7 1636 aa19.87■□□□□ 0.77
CSNK1D-218ENST00000581655 ATF3P18847 181 aa19.86■□□□□ 0.77
CSNK1D-218ENST00000581655 TBX22Q9Y458 520 aa19.86■□□□□ 0.77
CSNK1D-218ENST00000581655 GCC2Q8IWJ2 1684 aa19.85■□□□□ 0.77
CSNK1D-218ENST00000581655 C19orf44Q9H6X5 657 aa19.85■□□□□ 0.77
CSNK1D-218ENST00000581655 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
CSNK1D-218ENST00000581655 DIP2AQ14689 1571 aa19.85■□□□□ 0.77
CSNK1D-218ENST00000581655 AFF2P51816 1311 aa19.84■□□□□ 0.77
CSNK1D-218ENST00000581655 ANKRD30AQ9BXX3 1397 aa19.83■□□□□ 0.77
CSNK1D-218ENST00000581655 HDGFP51858 240 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-218ENST00000581655 BRINP3Q76B58 766 aa19.82■□□□□ 0.76
CSNK1D-218ENST00000581655 TMEM131LA2VDJ0 1609 aa19.81■□□□□ 0.76
CSNK1D-218ENST00000581655 ADAMTS13Q76LX8 1427 aa19.81■□□□□ 0.76
CSNK1D-218ENST00000581655 RGS12O14924 1447 aa19.8■□□□□ 0.76
CSNK1D-218ENST00000581655 RPRD2Q5VT52 1461 aaKnown RBP19.79■□□□□ 0.76
CSNK1D-218ENST00000581655 NUTM2DQ5VT03 806 aaPredicted RBP19.78■□□□□ 0.76
CSNK1D-218ENST00000581655 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.78■□□□□ 0.76
CSNK1D-218ENST00000581655 CHGAP10645 457 aaKnown RBP19.77■□□□□ 0.76
CSNK1D-218ENST00000581655 PIK3R4Q99570 1358 aa19.77■□□□□ 0.76
CSNK1D-218ENST00000581655 RBM6P78332 1123 aaKnown RBP19.76■□□□□ 0.75
CSNK1D-218ENST00000581655 C8orf37Q96NL8 207 aa19.76■□□□□ 0.75
CSNK1D-218ENST00000581655 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
CSNK1D-218ENST00000581655 SETD5Q9C0A6 1442 aa19.76■□□□□ 0.75
CSNK1D-218ENST00000581655 QTRT2Q9H974 415 aaKnown RBP19.75■□□□□ 0.75
CSNK1D-218ENST00000581655 AMOTL2Q9Y2J4 779 aa19.74■□□□□ 0.75
CSNK1D-218ENST00000581655 PTPRUQ92729 1446 aa19.73■□□□□ 0.75
CSNK1D-218ENST00000581655 NHSL1Q5SYE7 1610 aa19.73■□□□□ 0.75
CSNK1D-218ENST00000581655 DCCP43146 1447 aa19.72■□□□□ 0.75
CSNK1D-218ENST00000581655 TRPM2O94759 1503 aa19.71■□□□□ 0.75
CSNK1D-218ENST00000581655 LRRC59Q96AG4 307 aaKnown RBP19.71■□□□□ 0.75
CSNK1D-218ENST00000581655 ADGRL2O95490 1459 aa19.7■□□□□ 0.74
CSNK1D-218ENST00000581655 MST1RQ04912 1400 aa19.69■□□□□ 0.74
CSNK1D-218ENST00000581655 ANKRD50Q9ULJ7 1429 aa19.69■□□□□ 0.74
CSNK1D-218ENST00000581655 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
CSNK1D-218ENST00000581655 DDX17Q92841 729 aaKnown RBP19.68■□□□□ 0.74
CSNK1D-218ENST00000581655 ATAD2Q6PL18 1390 aa19.67■□□□□ 0.74
CSNK1D-218ENST00000581655 UNC13BO14795 1591 aa19.66■□□□□ 0.74
CSNK1D-218ENST00000581655 NGLY1Q96IV0 654 aa19.66■□□□□ 0.74
CSNK1D-218ENST00000581655 XRN1Q8IZH2 1706 aaKnown RBP19.65■□□□□ 0.74
CSNK1D-218ENST00000581655 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
CSNK1D-218ENST00000581655 LOC105371045A0A1W2PR82 267 aa19.64■□□□□ 0.73
CSNK1D-218ENST00000581655 ZRANB1Q9UGI0 708 aa19.64■□□□□ 0.73
CSNK1D-218ENST00000581655 E9PCH4 1651 aa19.64■□□□□ 0.73
CSNK1D-218ENST00000581655 APLP2Q06481 763 aa19.63■□□□□ 0.73
CSNK1D-218ENST00000581655 SETBP1Q9Y6X0 1596 aa19.61■□□□□ 0.73
CSNK1D-218ENST00000581655 FOXD1Q16676 465 aa19.61■□□□□ 0.73
CSNK1D-218ENST00000581655 EP400Q96L91 3159 aa19.61■□□□□ 0.73
CSNK1D-218ENST00000581655 NRXN3Q9Y4C0 1643 aa19.61■□□□□ 0.73
CSNK1D-218ENST00000581655 USP21Q9UK80 565 aa19.59■□□□□ 0.73
CSNK1D-218ENST00000581655 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
CSNK1D-218ENST00000581655 FAM50AQ14320 339 aaKnown RBP19.58■□□□□ 0.72
CSNK1D-218ENST00000581655 TRPC5Q9UL62 973 aaPredicted RBP19.58■□□□□ 0.72
CSNK1D-218ENST00000581655 METP08581 1390 aa19.57■□□□□ 0.72
CSNK1D-218ENST00000581655 NALCNQ8IZF0 1738 aa19.56■□□□□ 0.72
CSNK1D-218ENST00000581655 C1orf167Q5SNV9 1468 aa19.54■□□□□ 0.72
CSNK1D-218ENST00000581655 ATRNO75882 1429 aa19.53■□□□□ 0.72
CSNK1D-218ENST00000581655 FNBP4Q8N3X1 1017 aaPredicted RBP19.53■□□□□ 0.72
CSNK1D-218ENST00000581655 IQGAP3Q86VI3 1631 aa19.53■□□□□ 0.72
CSNK1D-218ENST00000581655 SOS2Q07890 1332 aaPredicted RBP19.51■□□□□ 0.71
CSNK1D-218ENST00000581655 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
CSNK1D-218ENST00000581655 LAMC1P11047 1609 aa19.51■□□□□ 0.71
CSNK1D-218ENST00000581655 ZNF326Q5BKZ1 582 aaKnown RBP19.5■□□□□ 0.71
CSNK1D-218ENST00000581655 CCDC125Q86Z20 511 aa19.5■□□□□ 0.71
CSNK1D-218ENST00000581655 ORAI2Q96SN7 254 aa19.5■□□□□ 0.71
CSNK1D-218ENST00000581655 NUP155O75694 1391 aa19.46■□□□□ 0.71
CSNK1D-218ENST00000581655 COL22A1Q8NFW1 1626 aaPredicted RBP19.46■□□□□ 0.71
CSNK1D-218ENST00000581655 SPHKAPQ2M3C7 1700 aa19.44■□□□□ 0.7
CSNK1D-218ENST00000581655 MYOM2P54296 1465 aa19.43■□□□□ 0.7
CSNK1D-218ENST00000581655 BCL9LQ86UU0 1499 aa19.43■□□□□ 0.7
CSNK1D-218ENST00000581655 GJD4Q96KN9 370 aaPredicted RBP19.42■□□□□ 0.7
CSNK1D-218ENST00000581655 NEXMIFQ5QGS0 1516 aa19.41■□□□□ 0.7
CSNK1D-218ENST00000581655 MARF1Q9Y4F3 1742 aaKnown RBP19.41■□□□□ 0.7
CSNK1D-218ENST00000581655 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
CSNK1D-218ENST00000581655 ROBO2Q9HCK4 1378 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms