RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 IFT172Q9UG01 1749 aa15.58■□□□□ 0.08
SKA2-206ENST00000581068 VGFO15240 615 aaPredicted RBP15.58■□□□□ 0.08
SKA2-206ENST00000581068 HSPA5P11021 654 aaKnown RBP15.58■□□□□ 0.08
SKA2-206ENST00000581068 CARD11Q9BXL7 1154 aa15.58■□□□□ 0.08
SKA2-206ENST00000581068 ROCK2O75116 1388 aaKnown RBP15.58■□□□□ 0.08
SKA2-206ENST00000581068 TRPM1Q7Z4N2 1603 aa15.57■□□□□ 0.08
SKA2-206ENST00000581068 ADGRF5Q8IZF2 1346 aa15.57■□□□□ 0.08
SKA2-206ENST00000581068 NLRP1Q9C000 1473 aa15.57■□□□□ 0.08
SKA2-206ENST00000581068 RIMS1Q86UR5 1692 aaKnown RBP15.57■□□□□ 0.08
SKA2-206ENST00000581068 PPLO60437 1756 aa15.57■□□□□ 0.08
SKA2-206ENST00000581068 GPRASP1Q5JY77 1395 aa15.56■□□□□ 0.08
SKA2-206ENST00000581068 ZFYVE9O95405 1425 aa15.56■□□□□ 0.08
SKA2-206ENST00000581068 A2ML1A8K2U0 1454 aa15.56■□□□□ 0.08
SKA2-206ENST00000581068 NRXN1Q9ULB1 1477 aa15.56■□□□□ 0.08
SKA2-206ENST00000581068 NEXMIFQ5QGS0 1516 aa15.55■□□□□ 0.08
SKA2-206ENST00000581068 NBPF1Q3BBV0 1214 aa15.55■□□□□ 0.08
SKA2-206ENST00000581068 HIRIP3Q9BW71 556 aaPredicted RBP15.54■□□□□ 0.08
SKA2-206ENST00000581068 MYO5BQ9ULV0 1848 aa15.53■□□□□ 0.08
SKA2-206ENST00000581068 HDGFP51858 240 aaKnown RBP15.53■□□□□ 0.08
SKA2-206ENST00000581068 KIAA1210Q9ULL0 1709 aa15.53■□□□□ 0.08
SKA2-206ENST00000581068 USP47Q96K76 1375 aa15.52■□□□□ 0.08
SKA2-206ENST00000581068 KDM5AP29375 1690 aaKnown RBP15.52■□□□□ 0.08
SKA2-206ENST00000581068 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.52■□□□□ 0.08
SKA2-206ENST00000581068 LAMC1P11047 1609 aa15.52■□□□□ 0.08
SKA2-206ENST00000581068 RIMS2Q9UQ26 1411 aa15.51■□□□□ 0.07
SKA2-206ENST00000581068 CFAP70Q5T0N1 1121 aa15.51■□□□□ 0.07
SKA2-206ENST00000581068 NUTM2DQ5VT03 806 aaPredicted RBP15.51■□□□□ 0.07
SKA2-206ENST00000581068 C14orf93Q9H972 538 aaKnown RBP15.51■□□□□ 0.07
SKA2-206ENST00000581068 PIK3C2GO75747 1445 aa15.51■□□□□ 0.07
SKA2-206ENST00000581068 UBR1Q8IWV7 1749 aa15.48■□□□□ 0.07
SKA2-206ENST00000581068 DIEXFQ68CQ4 756 aaKnown RBP15.47■□□□□ 0.07
SKA2-206ENST00000581068 THEMISQ8N1K5 641 aaPredicted RBP15.47■□□□□ 0.07
SKA2-206ENST00000581068 TMEM2Q9UHN6 1383 aa15.47■□□□□ 0.07
SKA2-206ENST00000581068 PTPRMP28827 1452 aa15.46■□□□□ 0.07
SKA2-206ENST00000581068 SCAF11Q99590 1463 aaKnown RBP15.46■□□□□ 0.06
SKA2-206ENST00000581068 SETBP1Q9Y6X0 1596 aa15.45■□□□□ 0.06
SKA2-206ENST00000581068 ST20-MTHFSA0A0A6YYL1 179 aa15.45■□□□□ 0.06
SKA2-206ENST00000581068 MYO3AQ8NEV4 1616 aa15.45■□□□□ 0.06
SKA2-206ENST00000581068 EID1Q9Y6B2 187 aa15.43■□□□□ 0.06
SKA2-206ENST00000581068 IQGAP1P46940 1657 aa15.42■□□□□ 0.06
SKA2-206ENST00000581068 EIF3AQ14152 1382 aaKnown RBP15.42■□□□□ 0.06
SKA2-206ENST00000581068 TXNDC2Q86VQ3 553 aa15.42■□□□□ 0.06
SKA2-206ENST00000581068 SLIT1O75093 1534 aa15.42■□□□□ 0.06
SKA2-206ENST00000581068 SETD1BQ9UPS6 1966 aaKnown RBP15.42■□□□□ 0.06
SKA2-206ENST00000581068 CEP170BQ9Y4F5 1589 aaPredicted RBP15.41■□□□□ 0.06
SKA2-206ENST00000581068 ARHGAP23Q9P227 1491 aa15.41■□□□□ 0.06
SKA2-206ENST00000581068 TMEM132EQ6IEE7 984 aa15.41■□□□□ 0.06
SKA2-206ENST00000581068 ADGRB1O14514 1584 aa15.41■□□□□ 0.06
SKA2-206ENST00000581068 CCDC7Q96M83 1385 aa15.4■□□□□ 0.06
SKA2-206ENST00000581068 C11orf95C9JLR9 678 aaPredicted RBP15.4■□□□□ 0.06
SKA2-206ENST00000581068 WASHC2AQ641Q2 1341 aa15.4■□□□□ 0.06
SKA2-206ENST00000581068 ALKQ9UM73 1620 aa15.39■□□□□ 0.05
SKA2-206ENST00000581068 LTKP29376 864 aa15.39■□□□□ 0.05
SKA2-206ENST00000581068 DDX10Q13206 875 aaKnown RBP15.39■□□□□ 0.05
SKA2-206ENST00000581068 BCANQ96GW7 911 aa15.39■□□□□ 0.05
SKA2-206ENST00000581068 ZNF142P52746 1687 aaPredicted RBP15.38■□□□□ 0.05
SKA2-206ENST00000581068 PLEKHG1Q9ULL1 1385 aa15.38■□□□□ 0.05
SKA2-206ENST00000581068 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
SKA2-206ENST00000581068 KDM4FA0A1W2PPD8 638 aa15.37■□□□□ 0.05
SKA2-206ENST00000581068 TESK2Q96S53 571 aa15.37■□□□□ 0.05
SKA2-206ENST00000581068 TRAK1Q9UPV9 953 aa15.37■□□□□ 0.05
SKA2-206ENST00000581068 KIF7Q2M1P5 1343 aa15.37■□□□□ 0.05
SKA2-206ENST00000581068 TMF1P82094 1093 aa15.36■□□□□ 0.05
SKA2-206ENST00000581068 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
SKA2-206ENST00000581068 POLR1AO95602 1720 aaPredicted RBP15.34■□□□□ 0.05
SKA2-206ENST00000581068 ASXL1Q8IXJ9 1541 aa15.34■□□□□ 0.05
SKA2-206ENST00000581068 STK26Q9P289 416 aa15.34■□□□□ 0.05
SKA2-206ENST00000581068 NRXN3Q9Y4C0 1643 aa15.34■□□□□ 0.05
SKA2-206ENST00000581068 CENPJQ9HC77 1338 aaPredicted RBP15.34■□□□□ 0.05
SKA2-206ENST00000581068 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
SKA2-206ENST00000581068 LRPPRCP42704 1394 aaKnown RBP15.33■□□□□ 0.04
SKA2-206ENST00000581068 CDCA8Q53HL2 280 aa15.32■□□□□ 0.04
SKA2-206ENST00000581068 POLR3GLQ9BT43 218 aa15.32■□□□□ 0.04
SKA2-206ENST00000581068 TBX22Q9Y458 520 aa15.32■□□□□ 0.04
SKA2-206ENST00000581068 ADAMTS13Q76LX8 1427 aa15.32■□□□□ 0.04
SKA2-206ENST00000581068 SETD1AO15047 1707 aaKnown RBP15.31■□□□□ 0.04
SKA2-206ENST00000581068 ABCC11Q96J66 1382 aa15.31■□□□□ 0.04
SKA2-206ENST00000581068 SBNO2Q9Y2G9 1366 aa15.31■□□□□ 0.04
SKA2-206ENST00000581068 MED14O60244 1454 aa15.3■□□□□ 0.04
SKA2-206ENST00000581068 METP08581 1390 aa15.3■□□□□ 0.04
SKA2-206ENST00000581068 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
SKA2-206ENST00000581068 DISP3Q9P2K9 1392 aa15.3■□□□□ 0.04
SKA2-206ENST00000581068 SIRT1Q96EB6 747 aa15.29■□□□□ 0.04
SKA2-206ENST00000581068 POGKQ9P215 609 aa15.29■□□□□ 0.04
SKA2-206ENST00000581068 DLC1Q96QB1 1528 aa15.28■□□□□ 0.04
SKA2-206ENST00000581068 SLC26A8Q96RN1 970 aa15.28■□□□□ 0.04
SKA2-206ENST00000581068 ARHGEF28Q8N1W1 1705 aaKnown RBP15.28■□□□□ 0.04
SKA2-206ENST00000581068 DIP2AQ14689 1571 aa15.28■□□□□ 0.04
SKA2-206ENST00000581068 PRAM1Q96QH2 718 aa15.26■□□□□ 0.03
SKA2-206ENST00000581068 QRICH2Q9H0J4 1663 aa15.25■□□□□ 0.03
SKA2-206ENST00000581068 TECPR2O15040 1411 aa15.25■□□□□ 0.03
SKA2-206ENST00000581068 MIER1Q8N108 512 aa15.24■□□□□ 0.03
SKA2-206ENST00000581068 PUS7Q96PZ0 661 aaKnown RBP15.24■□□□□ 0.03
SKA2-206ENST00000581068 NPHP4O75161 1426 aaPredicted RBP15.24■□□□□ 0.03
SKA2-206ENST00000581068 FAM135BQ49AJ0 1406 aa15.24■□□□□ 0.03
SKA2-206ENST00000581068 PIK3R4Q99570 1358 aa15.24■□□□□ 0.03
SKA2-206ENST00000581068 EVC2Q86UK5 1308 aa15.23■□□□□ 0.03
SKA2-206ENST00000581068 NCKAP5LQ9HCH0 1330 aa15.23■□□□□ 0.03
SKA2-206ENST00000581068 SAFB2Q14151 953 aaKnown RBP eCLIP15.23■□□□□ 0.03
SKA2-206ENST00000581068 KNDC1Q76NI1 1749 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms